RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 HNMTP50135 292 aa11.71□□□□□ -0.53
SREBF1-215ENST00000487401 TDGF1P3P51864 188 aa11.71□□□□□ -0.53
SREBF1-215ENST00000487401 TAS2R39P59534 338 aa11.71□□□□□ -0.53
SREBF1-215ENST00000487401 RAB8AP61006 207 aa11.71□□□□□ -0.53
SREBF1-215ENST00000487401 OLR1P78380 273 aa11.71□□□□□ -0.53
SREBF1-215ENST00000487401 REEP5Q00765 189 aa11.71□□□□□ -0.53
SREBF1-215ENST00000487401 RBPJQ06330 500 aa11.71□□□□□ -0.53
SREBF1-215ENST00000487401 ILF2Q12905 390 aaKnown RBP11.71□□□□□ -0.53
SREBF1-215ENST00000487401 TUBA3CQ13748 450 aa11.71□□□□□ -0.53
SREBF1-215ENST00000487401 USP10Q14694 798 aaKnown RBP11.71□□□□□ -0.53
SREBF1-215ENST00000487401 ZRSR2Q15696 482 aaKnown RBP11.71□□□□□ -0.53
SREBF1-215ENST00000487401 H3F3CQ6NXT2 135 aa11.71□□□□□ -0.53
SREBF1-215ENST00000487401 TUBA3EQ6PEY2 450 aa11.71□□□□□ -0.53
SREBF1-215ENST00000487401 TMPRSS11BQ86T26 416 aa11.71□□□□□ -0.53
SREBF1-215ENST00000487401 CRLF3Q8IUI8 442 aa11.71□□□□□ -0.53
SREBF1-215ENST00000487401 ZBED8Q8IZ13 594 aa11.71□□□□□ -0.53
SREBF1-215ENST00000487401 HORMAD2Q8N7B1 307 aa11.71□□□□□ -0.53
SREBF1-215ENST00000487401 ARMC2Q8NEN0 867 aa11.71□□□□□ -0.53
SREBF1-215ENST00000487401 UTP15Q8TED0 518 aaKnown RBP11.71□□□□□ -0.53
SREBF1-215ENST00000487401 PDLIM2Q96JY6 352 aa11.71□□□□□ -0.53
SREBF1-215ENST00000487401 PTCHD1Q96NR3 888 aa11.71□□□□□ -0.53
SREBF1-215ENST00000487401 SPNS1Q9H2V7 528 aa11.71□□□□□ -0.53
SREBF1-215ENST00000487401 RHBGQ9H310 441 aa11.71□□□□□ -0.53
SREBF1-215ENST00000487401 MOCS1Q9NZB8 636 aa11.71□□□□□ -0.53
SREBF1-215ENST00000487401 OARD1Q9Y530 152 aa11.71□□□□□ -0.53
SREBF1-215ENST00000487401 SPTAN1Q13813 2472 aaKnown RBP11.71□□□□□ -0.53
SREBF1-215ENST00000487401 TRGV8A0A0C4DH27 118 aa11.7□□□□□ -0.54
SREBF1-215ENST00000487401 ZG16O60844 167 aa11.7□□□□□ -0.54
SREBF1-215ENST00000487401 DNAJB6O75190 326 aa11.7□□□□□ -0.54
SREBF1-215ENST00000487401 B3GALT4O96024 378 aa11.7□□□□□ -0.54
SREBF1-215ENST00000487401 RNH1P13489 461 aaKnown RBP11.7□□□□□ -0.54
SREBF1-215ENST00000487401 MST1P26927 711 aa11.7□□□□□ -0.54
SREBF1-215ENST00000487401 CD96P40200 585 aa11.7□□□□□ -0.54
SREBF1-215ENST00000487401 CASP6P55212 293 aa11.7□□□□□ -0.54
SREBF1-215ENST00000487401 SLC26A5P58743 744 aa11.7□□□□□ -0.54
SREBF1-215ENST00000487401 CDKL1Q00532 357 aa11.7□□□□□ -0.54
SREBF1-215ENST00000487401 OC90Q02509 493 aaPredicted RBP11.7□□□□□ -0.54
SREBF1-215ENST00000487401 ZNF460Q14592 562 aa11.7□□□□□ -0.54
SREBF1-215ENST00000487401 FASTKD3Q14CZ7 662 aaKnown RBP11.7□□□□□ -0.54
SREBF1-215ENST00000487401 OR1C1Q15619 314 aa11.7□□□□□ -0.54
SREBF1-215ENST00000487401 PPP1R3AQ16821 1122 aa11.7□□□□□ -0.54
SREBF1-215ENST00000487401 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.7□□□□□ -0.54
SREBF1-215ENST00000487401 CAPN12Q6ZSI9 719 aa11.7□□□□□ -0.54
SREBF1-215ENST00000487401 ADAMTSL2Q86TH1 951 aa11.7□□□□□ -0.54
SREBF1-215ENST00000487401 ANKRD53Q8N9V6 530 aa11.7□□□□□ -0.54
SREBF1-215ENST00000487401 PYROXD1Q8WU10 500 aa11.7□□□□□ -0.54
SREBF1-215ENST00000487401 RELTQ969Z4 430 aa11.7□□□□□ -0.54
SREBF1-215ENST00000487401 RHOJQ9H4E5 214 aa11.7□□□□□ -0.54
SREBF1-215ENST00000487401 CDCP1Q9H5V8 836 aa11.7□□□□□ -0.54
SREBF1-215ENST00000487401 GPAMQ9HCL2 828 aa11.7□□□□□ -0.54
SREBF1-215ENST00000487401 ANKRD10Q9NXR5 420 aa11.7□□□□□ -0.54
SREBF1-215ENST00000487401 TXNDC16Q9P2K2 825 aa11.7□□□□□ -0.54
SREBF1-215ENST00000487401 SUCOQ9UBS9 1254 aaKnown RBP11.7□□□□□ -0.54
SREBF1-215ENST00000487401 UNC79Q9P2D8 2635 aa11.7□□□□□ -0.54
SREBF1-215ENST00000487401 NOTCH2Q04721 2471 aa11.69□□□□□ -0.54
SREBF1-215ENST00000487401 GABRR3A8MPY1 467 aa11.69□□□□□ -0.54
SREBF1-215ENST00000487401 E7ESA3 106 aa11.69□□□□□ -0.54
SREBF1-215ENST00000487401 FAM227AF5H4B4 570 aa11.69□□□□□ -0.54
SREBF1-215ENST00000487401 WDR47O94967 919 aa11.69□□□□□ -0.54
SREBF1-215ENST00000487401 MLYCDO95822 493 aa11.69□□□□□ -0.54
SREBF1-215ENST00000487401 SERPINA6P08185 405 aa11.69□□□□□ -0.54
SREBF1-215ENST00000487401 C1GALT1C1LP0DN25 315 aa11.69□□□□□ -0.54
SREBF1-215ENST00000487401 GNAZP19086 355 aa11.69□□□□□ -0.54
SREBF1-215ENST00000487401 RPL21P46778 160 aaKnown RBP11.69□□□□□ -0.54
SREBF1-215ENST00000487401 STXBP1P61764 594 aaKnown RBP11.69□□□□□ -0.54
SREBF1-215ENST00000487401 BTN3A2P78410 334 aa11.69□□□□□ -0.54
SREBF1-215ENST00000487401 PMP22Q01453 160 aa11.69□□□□□ -0.54
SREBF1-215ENST00000487401 POU4F1Q01851 419 aa11.69□□□□□ -0.54
SREBF1-215ENST00000487401 SRSF11Q05519 484 aaKnown RBP11.69□□□□□ -0.54
SREBF1-215ENST00000487401 CALCOCO2Q13137 446 aa11.69□□□□□ -0.54
SREBF1-215ENST00000487401 TSNQ15631 228 aaKnown RBP11.69□□□□□ -0.54
SREBF1-215ENST00000487401 TOR1AIP1Q5JTV8 583 aa11.69□□□□□ -0.54
SREBF1-215ENST00000487401 SPINK14Q6IE38 97 aa11.69□□□□□ -0.54
SREBF1-215ENST00000487401 QSOX2Q6ZRP7 698 aa11.69□□□□□ -0.54
SREBF1-215ENST00000487401 MAATS1Q7Z4T9 603 aa11.69□□□□□ -0.54
SREBF1-215ENST00000487401 RPS19BP1Q86WX3 136 aaKnown RBP11.69□□□□□ -0.54
SREBF1-215ENST00000487401 SLC34A3Q8N130 599 aa11.69□□□□□ -0.54
SREBF1-215ENST00000487401 TMEM178AQ8NBL3 297 aa11.69□□□□□ -0.54
SREBF1-215ENST00000487401 TTLQ8NG68 377 aa11.69□□□□□ -0.54
SREBF1-215ENST00000487401 ANKRD49Q8WVL7 239 aa11.69□□□□□ -0.54
SREBF1-215ENST00000487401 CCT6BQ92526 530 aa11.69□□□□□ -0.54
SREBF1-215ENST00000487401 CDKL2Q92772 493 aa11.69□□□□□ -0.54
SREBF1-215ENST00000487401 TSPAN17Q96FV3 270 aa11.69□□□□□ -0.54
SREBF1-215ENST00000487401 FAR2Q96K12 515 aa11.69□□□□□ -0.54
SREBF1-215ENST00000487401 CAPS2Q9BXY5 557 aa11.69□□□□□ -0.54
SREBF1-215ENST00000487401 SLC6A16Q9GZN6 736 aa11.69□□□□□ -0.54
SREBF1-215ENST00000487401 KLHL31Q9H511 634 aa11.69□□□□□ -0.54
SREBF1-215ENST00000487401 POPDC3Q9HBV1 291 aa11.69□□□□□ -0.54
SREBF1-215ENST00000487401 PRDM9Q9NQV7 894 aa11.69□□□□□ -0.54
SREBF1-215ENST00000487401 KLHL1Q9NR64 748 aa11.69□□□□□ -0.54
SREBF1-215ENST00000487401 COPG2Q9UBF2 871 aa11.69□□□□□ -0.54
SREBF1-215ENST00000487401 PCDHGB6Q9Y5F9 930 aa11.69□□□□□ -0.54
SREBF1-215ENST00000487401 TEX15Q9BXT5 2789 aa11.68□□□□□ -0.54
SREBF1-215ENST00000487401 FER1L5A0AVI2 2057 aa11.68□□□□□ -0.54
SREBF1-215ENST00000487401 FAM187AA6NFU0 413 aa11.68□□□□□ -0.54
SREBF1-215ENST00000487401 NCF1BA6NI72 391 aaPredicted RBP11.68□□□□□ -0.54
SREBF1-215ENST00000487401 NCF1CA8MVU1 366 aaPredicted RBP11.68□□□□□ -0.54
SREBF1-215ENST00000487401 CCL21O00585 134 aa11.68□□□□□ -0.54
SREBF1-215ENST00000487401 CDK2AP1O14519 115 aa11.68□□□□□ -0.54
SREBF1-215ENST00000487401 TP73O15350 636 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms