RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 ZNF740Q8NDX6 193 aa18.21■□□□□ 0.51
SMPDL3A-202ENST00000487215 TMEM125Q96AQ2 219 aa18.21■□□□□ 0.51
SMPDL3A-202ENST00000487215 ALKBH8Q96BT7 664 aaKnown RBP18.21■□□□□ 0.51
SMPDL3A-202ENST00000487215 SAMD15Q9P1V8 674 aa18.21■□□□□ 0.51
SMPDL3A-202ENST00000487215 PDE10AQ9Y233 779 aa18.21■□□□□ 0.51
SMPDL3A-202ENST00000487215 MTORP42345 2549 aa18.21■□□□□ 0.51
SMPDL3A-202ENST00000487215 ZCWPW2A0A1B0GU75 182 aa18.2■□□□□ 0.5
SMPDL3A-202ENST00000487215 FAM237BA0A1B0GVD1 139 aa18.2■□□□□ 0.5
SMPDL3A-202ENST00000487215 EIF3FO00303 357 aaPredicted RBP18.2■□□□□ 0.5
SMPDL3A-202ENST00000487215 NDUFS4O43181 175 aa18.2■□□□□ 0.5
SMPDL3A-202ENST00000487215 CHST10O43529 356 aa18.2■□□□□ 0.5
SMPDL3A-202ENST00000487215 DIAPH2O60879 1101 aa18.2■□□□□ 0.5
SMPDL3A-202ENST00000487215 B4GALT2O60909 372 aa18.2■□□□□ 0.5
SMPDL3A-202ENST00000487215 B3GALT4O96024 378 aa18.2■□□□□ 0.5
SMPDL3A-202ENST00000487215 RFC3P40938 356 aa18.2■□□□□ 0.5
SMPDL3A-202ENST00000487215 NAE1Q13564 534 aa18.2■□□□□ 0.5
SMPDL3A-202ENST00000487215 TRIP13Q15645 432 aaPredicted RBP18.2■□□□□ 0.5
SMPDL3A-202ENST00000487215 DEFB134Q4QY38 66 aa18.2■□□□□ 0.5
SMPDL3A-202ENST00000487215 ANKRD22Q5VYY1 191 aa18.2■□□□□ 0.5
SMPDL3A-202ENST00000487215 LCTLQ6UWM7 567 aa18.2■□□□□ 0.5
SMPDL3A-202ENST00000487215 SULF2Q8IWU5 870 aa18.2■□□□□ 0.5
SMPDL3A-202ENST00000487215 CYP4X1Q8N118 509 aa18.2■□□□□ 0.5
SMPDL3A-202ENST00000487215 ASB5Q8WWX0 329 aa18.2■□□□□ 0.5
SMPDL3A-202ENST00000487215 POM121Q96HA1 1249 aa18.2■□□□□ 0.5
SMPDL3A-202ENST00000487215 SGPP1Q9BX95 441 aa18.2■□□□□ 0.5
SMPDL3A-202ENST00000487215 TNFRSF10DQ9UBN6 386 aa18.2■□□□□ 0.5
SMPDL3A-202ENST00000487215 ZKSCAN5Q9Y2L8 839 aa18.2■□□□□ 0.5
SMPDL3A-202ENST00000487215 KLF13Q9Y2Y9 288 aaPredicted RBP18.2■□□□□ 0.5
SMPDL3A-202ENST00000487215 COMMD10Q9Y6G5 202 aa18.2■□□□□ 0.5
SMPDL3A-202ENST00000487215 GTF3C1Q12789 2109 aa18.19■□□□□ 0.5
SMPDL3A-202ENST00000487215 NKX2-6A6NCS4 301 aa18.19■□□□□ 0.5
SMPDL3A-202ENST00000487215 SAGE2PA6NJ88 616 aa18.19■□□□□ 0.5
SMPDL3A-202ENST00000487215 FAM90A27PA6NNH2 459 aa18.19■□□□□ 0.5
SMPDL3A-202ENST00000487215 HS6ST1O60243 411 aa18.19■□□□□ 0.5
SMPDL3A-202ENST00000487215 CDC40O60508 579 aaKnown RBP eCLIP18.19■□□□□ 0.5
SMPDL3A-202ENST00000487215 ALOX12P18054 663 aa18.19■□□□□ 0.5
SMPDL3A-202ENST00000487215 TFEBP19484 476 aa18.19■□□□□ 0.5
SMPDL3A-202ENST00000487215 MAGEA6P43360 314 aa18.19■□□□□ 0.5
SMPDL3A-202ENST00000487215 VPS41P49754 854 aa18.19■□□□□ 0.5
SMPDL3A-202ENST00000487215 ART1P52961 327 aa18.19■□□□□ 0.5
SMPDL3A-202ENST00000487215 SARNPP82979 210 aaKnown RBP18.19■□□□□ 0.5
SMPDL3A-202ENST00000487215 MEF2AQ02078 507 aaPredicted RBP18.19■□□□□ 0.5
SMPDL3A-202ENST00000487215 TFF3Q07654 80 aa18.19■□□□□ 0.5
SMPDL3A-202ENST00000487215 CMPK2Q5EBM0 449 aa18.19■□□□□ 0.5
SMPDL3A-202ENST00000487215 QSOX2Q6ZRP7 698 aa18.19■□□□□ 0.5
SMPDL3A-202ENST00000487215 NFAM1Q8NET5 270 aaPredicted RBP18.19■□□□□ 0.5
SMPDL3A-202ENST00000487215 PTCHD1Q96NR3 888 aa18.19■□□□□ 0.5
SMPDL3A-202ENST00000487215 AARSD1Q9BTE6 412 aaKnown RBP18.19■□□□□ 0.5
SMPDL3A-202ENST00000487215 SARGQ9BW04 601 aa18.19■□□□□ 0.5
SMPDL3A-202ENST00000487215 GUCA1BQ9UMX6 200 aa18.19■□□□□ 0.5
SMPDL3A-202ENST00000487215 RNF6Q9Y252 685 aa18.19■□□□□ 0.5
SMPDL3A-202ENST00000487215 FOXO6A8MYZ6 492 aa18.18■□□□□ 0.5
SMPDL3A-202ENST00000487215 KLRC4-KLRK1H3BQV0 150 aa18.18■□□□□ 0.5
SMPDL3A-202ENST00000487215 FCHO1O14526 889 aa18.18■□□□□ 0.5
SMPDL3A-202ENST00000487215 OR1F1O43749 312 aa18.18■□□□□ 0.5
SMPDL3A-202ENST00000487215 CEP104O60308 925 aa18.18■□□□□ 0.5
SMPDL3A-202ENST00000487215 PRMT3O60678 531 aa18.18■□□□□ 0.5
SMPDL3A-202ENST00000487215 FGGP02679 453 aa18.18■□□□□ 0.5
SMPDL3A-202ENST00000487215 C8GP07360 202 aa18.18■□□□□ 0.5
SMPDL3A-202ENST00000487215 NPPBP16860 134 aa18.18■□□□□ 0.5
SMPDL3A-202ENST00000487215 CCND1P24385 295 aa18.18■□□□□ 0.5
SMPDL3A-202ENST00000487215 CHRNB4P30926 498 aa18.18■□□□□ 0.5
SMPDL3A-202ENST00000487215 BTG2P78543 158 aa18.18■□□□□ 0.5
SMPDL3A-202ENST00000487215 PWP1Q13610 501 aa18.18■□□□□ 0.5
SMPDL3A-202ENST00000487215 TMEM211Q6ICI0 200 aa18.18■□□□□ 0.5
SMPDL3A-202ENST00000487215 LRRC8EQ6NSJ5 796 aa18.18■□□□□ 0.5
SMPDL3A-202ENST00000487215 ARMC10Q8N2F6 343 aa18.18■□□□□ 0.5
SMPDL3A-202ENST00000487215 ABHD11Q8NFV4 315 aa18.18■□□□□ 0.5
SMPDL3A-202ENST00000487215 LILRB4Q8NHJ6 448 aa18.18■□□□□ 0.5
SMPDL3A-202ENST00000487215 C16orf52Q8NHV5 167 aa18.18■□□□□ 0.5
SMPDL3A-202ENST00000487215 EEF1AKMT1Q8WVE0 214 aa18.18■□□□□ 0.5
SMPDL3A-202ENST00000487215 DEFB126Q9BYW3 111 aa18.18■□□□□ 0.5
SMPDL3A-202ENST00000487215 UCK2Q9BZX2 261 aa18.18■□□□□ 0.5
SMPDL3A-202ENST00000487215 PARVBQ9HBI1 364 aa18.18■□□□□ 0.5
SMPDL3A-202ENST00000487215 TRMT6Q9UJA5 497 aaKnown RBP18.18■□□□□ 0.5
SMPDL3A-202ENST00000487215 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.17■□□□□ 0.5
SMPDL3A-202ENST00000487215 TCRBV16S1A1N1A0A5B0 115 aa18.17■□□□□ 0.5
SMPDL3A-202ENST00000487215 MAGEB16A2A368 324 aa18.17■□□□□ 0.5
SMPDL3A-202ENST00000487215 PEX1O43933 1283 aa18.17■□□□□ 0.5
SMPDL3A-202ENST00000487215 TOXO94900 526 aa18.17■□□□□ 0.5
SMPDL3A-202ENST00000487215 HAUS5O94927 633 aa18.17■□□□□ 0.5
SMPDL3A-202ENST00000487215 SERPIND1P05546 499 aa18.17■□□□□ 0.5
SMPDL3A-202ENST00000487215 ZNF888P0CJ79 500 aaPredicted RBP18.17■□□□□ 0.5
SMPDL3A-202ENST00000487215 MAOAP21397 527 aa18.17■□□□□ 0.5
SMPDL3A-202ENST00000487215 CCR8P51685 355 aa18.17■□□□□ 0.5
SMPDL3A-202ENST00000487215 SKP1P63208 163 aa18.17■□□□□ 0.5
SMPDL3A-202ENST00000487215 GPS1Q13098 491 aa18.17■□□□□ 0.5
SMPDL3A-202ENST00000487215 SP140Q13342 867 aa18.17■□□□□ 0.5
SMPDL3A-202ENST00000487215 PHKG1Q16816 387 aa18.17■□□□□ 0.5
SMPDL3A-202ENST00000487215 DMRTC2Q8IXT2 367 aaPredicted RBP18.17■□□□□ 0.5
SMPDL3A-202ENST00000487215 RPRMLQ8N4K4 120 aa18.17■□□□□ 0.5
SMPDL3A-202ENST00000487215 OR4K1Q8NGD4 311 aa18.17■□□□□ 0.5
SMPDL3A-202ENST00000487215 MAIP1Q8WWC4 291 aa18.17■□□□□ 0.5
SMPDL3A-202ENST00000487215 HAUS8Q9BT25 410 aa18.17■□□□□ 0.5
SMPDL3A-202ENST00000487215 TP63Q9H3D4 680 aaPredicted RBP18.17■□□□□ 0.5
SMPDL3A-202ENST00000487215 PLSCR2Q9NRY7 297 aa18.17■□□□□ 0.5
SMPDL3A-202ENST00000487215 C20orf96Q9NUD7 363 aaPredicted RBP18.17■□□□□ 0.5
SMPDL3A-202ENST00000487215 FBXO5Q9UKT4 447 aa18.17■□□□□ 0.5
SMPDL3A-202ENST00000487215 IGKV3D-11A0A0A0MRZ8 115 aa18.16■□□□□ 0.5
SMPDL3A-202ENST00000487215 TRBC2A0A5B9 178 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms