RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 ATP1A2P50993 1020 aa18.41■□□□□ 0.54
PCOLCE-208ENST00000487172 ARFIP1P53367 373 aa18.41■□□□□ 0.54
PCOLCE-208ENST00000487172 HERC3Q15034 1050 aa18.41■□□□□ 0.54
PCOLCE-208ENST00000487172 TMEM35AQ53FP2 167 aa18.41■□□□□ 0.54
PCOLCE-208ENST00000487172 ARL13AQ5H913 290 aaPredicted RBP18.41■□□□□ 0.54
PCOLCE-208ENST00000487172 DEPDC1Q5TB30 811 aa18.41■□□□□ 0.54
PCOLCE-208ENST00000487172 TTC19Q6DKK2 380 aaPredicted RBP18.41■□□□□ 0.54
PCOLCE-208ENST00000487172 CHSY3Q70JA7 882 aa18.41■□□□□ 0.54
PCOLCE-208ENST00000487172 ABHD13Q7L211 337 aa18.41■□□□□ 0.54
PCOLCE-208ENST00000487172 CUZD1Q86UP6 607 aa18.41■□□□□ 0.54
PCOLCE-208ENST00000487172 TRIM42Q8IWZ5 723 aa18.41■□□□□ 0.54
PCOLCE-208ENST00000487172 CACNA2D3Q8IZS8 1091 aa18.41■□□□□ 0.54
PCOLCE-208ENST00000487172 SRFBP1Q8NEF9 429 aaKnown RBP18.41■□□□□ 0.54
PCOLCE-208ENST00000487172 RAB3IL1Q8TBN0 382 aa18.41■□□□□ 0.54
PCOLCE-208ENST00000487172 GAL3ST3Q96A11 431 aa18.41■□□□□ 0.54
PCOLCE-208ENST00000487172 DPH1Q9BZG8 443 aa18.41■□□□□ 0.54
PCOLCE-208ENST00000487172 REXO4Q9GZR2 422 aaKnown RBP18.41■□□□□ 0.54
PCOLCE-208ENST00000487172 KLHL31Q9H511 634 aa18.41■□□□□ 0.54
PCOLCE-208ENST00000487172 AKIRIN1Q9H9L7 192 aaPredicted RBP18.41■□□□□ 0.54
PCOLCE-208ENST00000487172 NDOR1Q9UHB4 597 aa18.41■□□□□ 0.54
PCOLCE-208ENST00000487172 MRPS2Q9Y399 296 aaKnown RBP18.41■□□□□ 0.54
PCOLCE-208ENST00000487172 SEC16AO15027 2179 aa18.4■□□□□ 0.54
PCOLCE-208ENST00000487172 MAGEB17A8MXT2 336 aa18.4■□□□□ 0.54
PCOLCE-208ENST00000487172 FFAR3O14843 346 aa18.4■□□□□ 0.54
PCOLCE-208ENST00000487172 GPR42O15529 346 aa18.4■□□□□ 0.54
PCOLCE-208ENST00000487172 TGFB1P01137 390 aa18.4■□□□□ 0.54
PCOLCE-208ENST00000487172 CHRNGP07510 517 aa18.4■□□□□ 0.54
PCOLCE-208ENST00000487172 UROSP10746 265 aa18.4■□□□□ 0.54
PCOLCE-208ENST00000487172 NEFHP12036 1026 aa18.4■□□□□ 0.54
PCOLCE-208ENST00000487172 ITGAXP20702 1163 aa18.4■□□□□ 0.54
PCOLCE-208ENST00000487172 BGNP21810 368 aa18.4■□□□□ 0.54
PCOLCE-208ENST00000487172 HNRNPH1P31943 449 aaKnown RBP18.4■□□□□ 0.54
PCOLCE-208ENST00000487172 STAT5AP42229 794 aa18.4■□□□□ 0.54
PCOLCE-208ENST00000487172 AVPR1BP47901 424 aa18.4■□□□□ 0.54
PCOLCE-208ENST00000487172 NEK2P51955 445 aa18.4■□□□□ 0.54
PCOLCE-208ENST00000487172 RPS13P62277 151 aaKnown RBP18.4■□□□□ 0.54
PCOLCE-208ENST00000487172 CUL3Q13618 768 aa18.4■□□□□ 0.54
PCOLCE-208ENST00000487172 NKAIN1Q4KMZ8 207 aa18.4■□□□□ 0.54
PCOLCE-208ENST00000487172 TOR1AIP1Q5JTV8 583 aa18.4■□□□□ 0.54
PCOLCE-208ENST00000487172 C1orf189Q5VU69 101 aa18.4■□□□□ 0.54
PCOLCE-208ENST00000487172 OR2L5Q8NG80 312 aa18.4■□□□□ 0.54
PCOLCE-208ENST00000487172 SELENOMQ8WWX9 145 aa18.4■□□□□ 0.54
PCOLCE-208ENST00000487172 MR1Q95460 341 aa18.4■□□□□ 0.54
PCOLCE-208ENST00000487172 RNF31Q96EP0 1072 aa18.4■□□□□ 0.54
PCOLCE-208ENST00000487172 MTERF1Q99551 399 aaKnown RBP18.4■□□□□ 0.54
PCOLCE-208ENST00000487172 C17orf62Q9BQA9 187 aa18.4■□□□□ 0.54
PCOLCE-208ENST00000487172 BRF2Q9HAW0 419 aa18.4■□□□□ 0.54
PCOLCE-208ENST00000487172 CLK4Q9HAZ1 481 aaKnown RBP18.4■□□□□ 0.54
PCOLCE-208ENST00000487172 ANKHQ9HCJ1 492 aa18.4■□□□□ 0.54
PCOLCE-208ENST00000487172 ZNF304Q9HCX3 659 aa18.4■□□□□ 0.54
PCOLCE-208ENST00000487172 NCOR2Q9Y618 2525 aa18.4■□□□□ 0.54
PCOLCE-208ENST00000487172 FER1L5A0AVI2 2057 aa18.39■□□□□ 0.53
PCOLCE-208ENST00000487172 MANBAO00462 879 aa18.39■□□□□ 0.53
PCOLCE-208ENST00000487172 ULK1O75385 1050 aa18.39■□□□□ 0.53
PCOLCE-208ENST00000487172 PDYNP01213 254 aa18.39■□□□□ 0.53
PCOLCE-208ENST00000487172 ZNF888P0CJ79 500 aaPredicted RBP18.39■□□□□ 0.53
PCOLCE-208ENST00000487172 HSD3B1P14060 373 aa18.39■□□□□ 0.53
PCOLCE-208ENST00000487172 HSD3B2P26439 372 aa18.39■□□□□ 0.53
PCOLCE-208ENST00000487172 ARRB2P32121 409 aa18.39■□□□□ 0.53
PCOLCE-208ENST00000487172 FOXA1P55317 472 aa18.39■□□□□ 0.53
PCOLCE-208ENST00000487172 ABCE1P61221 599 aaKnown RBP18.39■□□□□ 0.53
PCOLCE-208ENST00000487172 SNRPNP63162 240 aaKnown RBP18.39■□□□□ 0.53
PCOLCE-208ENST00000487172 SKP1P63208 163 aa18.39■□□□□ 0.53
PCOLCE-208ENST00000487172 TGM3Q08188 693 aa18.39■□□□□ 0.53
PCOLCE-208ENST00000487172 STX3Q13277 289 aa18.39■□□□□ 0.53
PCOLCE-208ENST00000487172 CLN3Q13286 438 aa18.39■□□□□ 0.53
PCOLCE-208ENST00000487172 DDX39BQ13838 428 aaKnown RBP18.39■□□□□ 0.53
PCOLCE-208ENST00000487172 KHDRBS2Q5VWX1 349 aaKnown RBP18.39■□□□□ 0.53
PCOLCE-208ENST00000487172 CES4AQ5XG92 561 aa18.39■□□□□ 0.53
PCOLCE-208ENST00000487172 ATG14Q6ZNE5 492 aa18.39■□□□□ 0.53
PCOLCE-208ENST00000487172 CLYBLQ8N0X4 340 aa18.39■□□□□ 0.53
PCOLCE-208ENST00000487172 RNF175Q8N4F7 328 aa18.39■□□□□ 0.53
PCOLCE-208ENST00000487172 KDF1Q8NAX2 398 aaPredicted RBP18.39■□□□□ 0.53
PCOLCE-208ENST00000487172 ZCCHC10Q8TBK6 192 aa18.39■□□□□ 0.53
PCOLCE-208ENST00000487172 KCNE4Q8WWG9 221 aa18.39■□□□□ 0.53
PCOLCE-208ENST00000487172 MTFMTQ96DP5 389 aaKnown RBP18.39■□□□□ 0.53
PCOLCE-208ENST00000487172 SERPINI1Q99574 410 aa18.39■□□□□ 0.53
PCOLCE-208ENST00000487172 CHST8Q9H2A9 424 aa18.39■□□□□ 0.53
PCOLCE-208ENST00000487172 TNFRSF12AQ9NP84 129 aa18.39■□□□□ 0.53
PCOLCE-208ENST00000487172 SLC22A11Q9NSA0 550 aa18.39■□□□□ 0.53
PCOLCE-208ENST00000487172 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.39■□□□□ 0.53
PCOLCE-208ENST00000487172 SSUH2Q9Y2M2 353 aa18.39■□□□□ 0.53
PCOLCE-208ENST00000487172 TIMM22Q9Y584 194 aa18.39■□□□□ 0.53
PCOLCE-208ENST00000487172 A0A0A6YYC8 382 aaPredicted RBP18.38■□□□□ 0.53
PCOLCE-208ENST00000487172 C21orf140B9A014 251 aa18.38■□□□□ 0.53
PCOLCE-208ENST00000487172 I3L1I5 382 aaPredicted RBP18.38■□□□□ 0.53
PCOLCE-208ENST00000487172 TERTO14746 1132 aaKnown RBP18.38■□□□□ 0.53
PCOLCE-208ENST00000487172 AZIN1O14977 448 aa18.38■□□□□ 0.53
PCOLCE-208ENST00000487172 GALR3O60755 368 aaPredicted RBP18.38■□□□□ 0.53
PCOLCE-208ENST00000487172 CRCPO75575 148 aa18.38■□□□□ 0.53
PCOLCE-208ENST00000487172 ALBP02768 609 aa18.38■□□□□ 0.53
PCOLCE-208ENST00000487172 CD63P08962 238 aa18.38■□□□□ 0.53
PCOLCE-208ENST00000487172 RAB40ALP0C0E4 278 aa18.38■□□□□ 0.53
PCOLCE-208ENST00000487172 CHN1P15882 459 aa18.38■□□□□ 0.53
PCOLCE-208ENST00000487172 IL1RNP18510 177 aa18.38■□□□□ 0.53
PCOLCE-208ENST00000487172 NR1D1P20393 614 aa18.38■□□□□ 0.53
PCOLCE-208ENST00000487172 EIF2S3P41091 472 aaKnown RBP18.38■□□□□ 0.53
PCOLCE-208ENST00000487172 OR1D4P47884 311 aa18.38■□□□□ 0.53
PCOLCE-208ENST00000487172 SLC1A6P48664 564 aa18.38■□□□□ 0.53
PCOLCE-208ENST00000487172 DSG2Q14126 1118 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms