RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 SELENOMQ8WWX9 145 aa10.84□□□□□ -0.67
NUP50-216ENST00000486184 GAL3ST3Q96A11 431 aa10.84□□□□□ -0.67
NUP50-216ENST00000486184 COL26A1Q96A83 441 aa10.84□□□□□ -0.67
NUP50-216ENST00000486184 MTFMTQ96DP5 389 aaKnown RBP10.84□□□□□ -0.67
NUP50-216ENST00000486184 MVB12AQ96EY5 273 aa10.84□□□□□ -0.67
NUP50-216ENST00000486184 MMABQ96EY8 250 aaPredicted RBP10.84□□□□□ -0.67
NUP50-216ENST00000486184 LRFN5Q96NI6 719 aa10.84□□□□□ -0.67
NUP50-216ENST00000486184 FRG2BQ96QU4 278 aa10.84□□□□□ -0.67
NUP50-216ENST00000486184 YIPF2Q9BWQ6 316 aa10.84□□□□□ -0.67
NUP50-216ENST00000486184 SYNPO2LQ9H987 977 aa10.84□□□□□ -0.67
NUP50-216ENST00000486184 ENAMQ9NRM1 1142 aa10.84□□□□□ -0.67
NUP50-216ENST00000486184 DKK4Q9UBT3 224 aa10.84□□□□□ -0.67
NUP50-216ENST00000486184 ACSL6Q9UKU0 697 aa10.84□□□□□ -0.67
NUP50-216ENST00000486184 PADI1Q9ULC6 663 aa10.84□□□□□ -0.67
NUP50-216ENST00000486184 FIS1Q9Y3D6 152 aa10.84□□□□□ -0.67
NUP50-216ENST00000486184 TSC22D4Q9Y3Q8 395 aa10.84□□□□□ -0.67
NUP50-216ENST00000486184 FER1L5A0AVI2 2057 aa10.84□□□□□ -0.67
NUP50-216ENST00000486184 DCHS1Q96JQ0 3298 aa10.84□□□□□ -0.67
NUP50-216ENST00000486184 NUP210LQ5VU65 1888 aa10.83□□□□□ -0.68
NUP50-216ENST00000486184 A0A0A6YYC8 382 aaPredicted RBP10.83□□□□□ -0.68
NUP50-216ENST00000486184 TEX51A0A1B0GUA7 166 aa10.83□□□□□ -0.68
NUP50-216ENST00000486184 TMEM8BA6NDV4 472 aa10.83□□□□□ -0.68
NUP50-216ENST00000486184 C1QTNF9BB2RNN3 333 aa10.83□□□□□ -0.68
NUP50-216ENST00000486184 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.83□□□□□ -0.68
NUP50-216ENST00000486184 I3L1I5 382 aaPredicted RBP10.83□□□□□ -0.68
NUP50-216ENST00000486184 RRP8O43159 456 aaKnown RBP10.83□□□□□ -0.68
NUP50-216ENST00000486184 ERI3O43414 337 aaKnown RBP10.83□□□□□ -0.68
NUP50-216ENST00000486184 ULK1O75385 1050 aa10.83□□□□□ -0.68
NUP50-216ENST00000486184 TGFB1P01137 390 aa10.83□□□□□ -0.68
NUP50-216ENST00000486184 C1QTNF9P0C862 333 aa10.83□□□□□ -0.68
NUP50-216ENST00000486184 ZNF888P0CJ79 500 aaPredicted RBP10.83□□□□□ -0.68
NUP50-216ENST00000486184 CHN1P15882 459 aa10.83□□□□□ -0.68
NUP50-216ENST00000486184 ALOX12P18054 663 aa10.83□□□□□ -0.68
NUP50-216ENST00000486184 IL1RNP18510 177 aa10.83□□□□□ -0.68
NUP50-216ENST00000486184 FBLP22087 321 aaKnown RBP10.83□□□□□ -0.68
NUP50-216ENST00000486184 PTX3P26022 381 aaPredicted RBP10.83□□□□□ -0.68
NUP50-216ENST00000486184 CCR10P46092 362 aa10.83□□□□□ -0.68
NUP50-216ENST00000486184 WDR4P57081 412 aaKnown RBP10.83□□□□□ -0.68
NUP50-216ENST00000486184 ABCE1P61221 599 aaKnown RBP10.83□□□□□ -0.68
NUP50-216ENST00000486184 GALNT1Q10472 559 aaPredicted RBP10.83□□□□□ -0.68
NUP50-216ENST00000486184 STX3Q13277 289 aa10.83□□□□□ -0.68
NUP50-216ENST00000486184 FAM53BQ14153 422 aa10.83□□□□□ -0.68
NUP50-216ENST00000486184 TMEM35AQ53FP2 167 aa10.83□□□□□ -0.68
NUP50-216ENST00000486184 ARL13AQ5H913 290 aaPredicted RBP10.83□□□□□ -0.68
NUP50-216ENST00000486184 ARHGAP40Q5TG30 622 aa10.83□□□□□ -0.68
NUP50-216ENST00000486184 ADNP2Q6IQ32 1131 aa10.83□□□□□ -0.68
NUP50-216ENST00000486184 TMEM214Q6NUQ4 689 aaKnown RBP10.83□□□□□ -0.68
NUP50-216ENST00000486184 LRRC69Q6ZNQ3 347 aa10.83□□□□□ -0.68
NUP50-216ENST00000486184 KIRREL3Q8IZU9 778 aa10.83□□□□□ -0.68
NUP50-216ENST00000486184 RAB3IL1Q8TBN0 382 aa10.83□□□□□ -0.68
NUP50-216ENST00000486184 WDR20Q8TBZ3 569 aa10.83□□□□□ -0.68
NUP50-216ENST00000486184 CREB3L4Q8TEY5 395 aa10.83□□□□□ -0.68
NUP50-216ENST00000486184 ZNF473Q8WTR7 871 aaKnown RBP10.83□□□□□ -0.68
NUP50-216ENST00000486184 ZCCHC14Q8WYQ9 949 aaKnown RBP10.83□□□□□ -0.68
NUP50-216ENST00000486184 MARVELD3Q96A59 401 aa10.83□□□□□ -0.68
NUP50-216ENST00000486184 NAF1Q96HR8 494 aaKnown RBP10.83□□□□□ -0.68
NUP50-216ENST00000486184 C10orf90Q96M02 699 aa10.83□□□□□ -0.68
NUP50-216ENST00000486184 SERPINI1Q99574 410 aa10.83□□□□□ -0.68
NUP50-216ENST00000486184 MS4A8Q9BY19 250 aa10.83□□□□□ -0.68
NUP50-216ENST00000486184 SLC6A16Q9GZN6 736 aa10.83□□□□□ -0.68
NUP50-216ENST00000486184 ROGDIQ9GZN7 287 aa10.83□□□□□ -0.68
NUP50-216ENST00000486184 REXO4Q9GZR2 422 aaKnown RBP10.83□□□□□ -0.68
NUP50-216ENST00000486184 ZNF304Q9HCX3 659 aa10.83□□□□□ -0.68
NUP50-216ENST00000486184 LHX9Q9NQ69 397 aa10.83□□□□□ -0.68
NUP50-216ENST00000486184 DMRT3Q9NQL9 472 aa10.83□□□□□ -0.68
NUP50-216ENST00000486184 INTS9Q9NV88 658 aaKnown RBP10.83□□□□□ -0.68
NUP50-216ENST00000486184 NMRK1Q9NWW6 199 aa10.83□□□□□ -0.68
NUP50-216ENST00000486184 IFT80Q9P2H3 777 aaPredicted RBP10.83□□□□□ -0.68
NUP50-216ENST00000486184 SLC22A7Q9Y694 548 aa10.83□□□□□ -0.68
NUP50-216ENST00000486184 CCDC88CQ9P219 2028 aa10.82□□□□□ -0.68
NUP50-216ENST00000486184 AKAP13Q12802 2813 aa10.82□□□□□ -0.68
NUP50-216ENST00000486184 A0A1B0GTL3 188 aa10.82□□□□□ -0.68
NUP50-216ENST00000486184 LRIT2A6NDA9 550 aa10.82□□□□□ -0.68
NUP50-216ENST00000486184 MAGEB17A8MXT2 336 aa10.82□□□□□ -0.68
NUP50-216ENST00000486184 FOXE1O00358 373 aaPredicted RBP10.82□□□□□ -0.68
NUP50-216ENST00000486184 MANBAO00462 879 aa10.82□□□□□ -0.68
NUP50-216ENST00000486184 UBFD1O14562 309 aaKnown RBP10.82□□□□□ -0.68
NUP50-216ENST00000486184 AZIN1O14977 448 aa10.82□□□□□ -0.68
NUP50-216ENST00000486184 SH3BGRLO75368 114 aa10.82□□□□□ -0.68
NUP50-216ENST00000486184 NSA2O95478 260 aaKnown RBP10.82□□□□□ -0.68
NUP50-216ENST00000486184 PDYNP01213 254 aa10.82□□□□□ -0.68
NUP50-216ENST00000486184 CHRNGP07510 517 aa10.82□□□□□ -0.68
NUP50-216ENST00000486184 CD63P08962 238 aa10.82□□□□□ -0.68
NUP50-216ENST00000486184 UROSP10746 265 aa10.82□□□□□ -0.68
NUP50-216ENST00000486184 TCN2P20062 427 aa10.82□□□□□ -0.68
NUP50-216ENST00000486184 HNRNPH1P31943 449 aaKnown RBP10.82□□□□□ -0.68
NUP50-216ENST00000486184 RORAP35398 523 aa10.82□□□□□ -0.68
NUP50-216ENST00000486184 STAT5AP42229 794 aa10.82□□□□□ -0.68
NUP50-216ENST00000486184 SLC1A6P48664 564 aa10.82□□□□□ -0.68
NUP50-216ENST00000486184 NEK2P51955 445 aa10.82□□□□□ -0.68
NUP50-216ENST00000486184 PLA2G16P53816 162 aa10.82□□□□□ -0.68
NUP50-216ENST00000486184 RAB8AP61006 207 aa10.82□□□□□ -0.68
NUP50-216ENST00000486184 RPS13P62277 151 aaKnown RBP10.82□□□□□ -0.68
NUP50-216ENST00000486184 RPS15P62841 145 aaKnown RBP10.82□□□□□ -0.68
NUP50-216ENST00000486184 ZNF33BQ06732 778 aa10.82□□□□□ -0.68
NUP50-216ENST00000486184 CSTF3Q12996 717 aaKnown RBP10.82□□□□□ -0.68
NUP50-216ENST00000486184 COL9A2Q14055 689 aaPredicted RBP10.82□□□□□ -0.68
NUP50-216ENST00000486184 SLC9A5Q14940 896 aa10.82□□□□□ -0.68
NUP50-216ENST00000486184 IMPG1Q17R60 797 aa10.82□□□□□ -0.68
NUP50-216ENST00000486184 NKAIN1Q4KMZ8 207 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms