RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 CTAGE8P0CG41 777 aa16.66■□□□□ 0.26
COL6A1-204ENST00000486023 ITGAMP11215 1152 aa16.66■□□□□ 0.26
COL6A1-204ENST00000486023 TFEBP19484 476 aa16.66■□□□□ 0.26
COL6A1-204ENST00000486023 CRABP2P29373 138 aa16.66■□□□□ 0.26
COL6A1-204ENST00000486023 PHBP35232 272 aa16.66■□□□□ 0.26
COL6A1-204ENST00000486023 SLC6A12P48065 614 aa16.66■□□□□ 0.26
COL6A1-204ENST00000486023 KCNC1P48547 511 aa16.66■□□□□ 0.26
COL6A1-204ENST00000486023 UBAP2LQ14157 1087 aaKnown RBP16.66■□□□□ 0.26
COL6A1-204ENST00000486023 NSDHLQ15738 373 aa16.66■□□□□ 0.26
COL6A1-204ENST00000486023 EIF2S3LQ2VIR3 472 aaKnown RBP16.66■□□□□ 0.26
COL6A1-204ENST00000486023 BTBD16Q32M84 506 aa16.66■□□□□ 0.26
COL6A1-204ENST00000486023 UBAP2Q5T6F2 1119 aaKnown RBP16.66■□□□□ 0.26
COL6A1-204ENST00000486023 SULT1C3Q6IMI6 304 aa16.66■□□□□ 0.26
COL6A1-204ENST00000486023 TMEM205Q6UW68 189 aa16.66■□□□□ 0.26
COL6A1-204ENST00000486023 SLCO4C1Q6ZQN7 724 aa16.66■□□□□ 0.26
COL6A1-204ENST00000486023 Q6ZS92 163 aa16.66■□□□□ 0.26
COL6A1-204ENST00000486023 CPEB2Q7Z5Q1 589 aaKnown RBP16.66■□□□□ 0.26
COL6A1-204ENST00000486023 CTAGE4Q8IX94 777 aa16.66■□□□□ 0.26
COL6A1-204ENST00000486023 CYP4X1Q8N118 509 aa16.66■□□□□ 0.26
COL6A1-204ENST00000486023 TCAIMQ8N3R3 496 aa16.66■□□□□ 0.26
COL6A1-204ENST00000486023 MMGT1Q8N4V1 131 aa16.66■□□□□ 0.26
COL6A1-204ENST00000486023 TRPV3Q8NET8 790 aa16.66■□□□□ 0.26
COL6A1-204ENST00000486023 UTP15Q8TED0 518 aaKnown RBP16.66■□□□□ 0.26
COL6A1-204ENST00000486023 TMEM79Q9BSE2 394 aa16.66■□□□□ 0.26
COL6A1-204ENST00000486023 SARGQ9BW04 601 aa16.66■□□□□ 0.26
COL6A1-204ENST00000486023 NINJ2Q9NZG7 142 aa16.66■□□□□ 0.26
COL6A1-204ENST00000486023 C19orf25Q9UFG5 118 aaPredicted RBP16.66■□□□□ 0.26
COL6A1-204ENST00000486023 MDC1Q14676 2089 aaKnown RBP16.66■□□□□ 0.26
COL6A1-204ENST00000486023 RELNP78509 3460 aa16.66■□□□□ 0.26
COL6A1-204ENST00000486023 ASH1LQ9NR48 2969 aaKnown RBP16.65■□□□□ 0.26
COL6A1-204ENST00000486023 URADA6NGE7 173 aa16.65■□□□□ 0.26
COL6A1-204ENST00000486023 STK16O75716 305 aa16.65■□□□□ 0.26
COL6A1-204ENST00000486023 ACSL3O95573 720 aa16.65■□□□□ 0.26
COL6A1-204ENST00000486023 SLC35E2BP0CK96 405 aa16.65■□□□□ 0.26
COL6A1-204ENST00000486023 ST13P50502 369 aaKnown RBP16.65■□□□□ 0.26
COL6A1-204ENST00000486023 SKP1P63208 163 aa16.65■□□□□ 0.26
COL6A1-204ENST00000486023 BTN3A2P78410 334 aa16.65■□□□□ 0.26
COL6A1-204ENST00000486023 DLG1Q12959 904 aa16.65■□□□□ 0.26
COL6A1-204ENST00000486023 MFAP5Q13361 173 aa16.65■□□□□ 0.26
COL6A1-204ENST00000486023 MRPL49Q13405 166 aaKnown RBP16.65■□□□□ 0.26
COL6A1-204ENST00000486023 ABRAXAS2Q15018 415 aa16.65■□□□□ 0.26
COL6A1-204ENST00000486023 ZKSCAN8Q15776 578 aaPredicted RBP16.65■□□□□ 0.26
COL6A1-204ENST00000486023 XKR6Q5GH73 641 aa16.65■□□□□ 0.26
COL6A1-204ENST00000486023 CRB2Q5IJ48 1285 aa16.65■□□□□ 0.26
COL6A1-204ENST00000486023 TMIGD1Q6UXZ0 262 aa16.65■□□□□ 0.26
COL6A1-204ENST00000486023 ANKRD37Q7Z713 158 aa16.65■□□□□ 0.26
COL6A1-204ENST00000486023 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.65■□□□□ 0.26
COL6A1-204ENST00000486023 KRT78Q8N1N4 520 aa16.65■□□□□ 0.26
COL6A1-204ENST00000486023 AFAP1L2Q8N4X5 818 aa16.65■□□□□ 0.26
COL6A1-204ENST00000486023 GALNT11Q8NCW6 608 aa16.65■□□□□ 0.26
COL6A1-204ENST00000486023 OR1N1Q8NGS0 311 aa16.65■□□□□ 0.26
COL6A1-204ENST00000486023 UHMK1Q8TAS1 419 aaKnown RBP16.65■□□□□ 0.26
COL6A1-204ENST00000486023 PRR7Q8TB68 274 aa16.65■□□□□ 0.26
COL6A1-204ENST00000486023 STAG3L4Q8TBR4 150 aa16.65■□□□□ 0.26
COL6A1-204ENST00000486023 TSLPQ969D9 159 aa16.65■□□□□ 0.26
COL6A1-204ENST00000486023 KIAA1191Q96A73 305 aa16.65■□□□□ 0.26
COL6A1-204ENST00000486023 TBC1D20Q96BZ9 403 aa16.65■□□□□ 0.26
COL6A1-204ENST00000486023 NXNL1Q96CM4 212 aa16.65■□□□□ 0.26
COL6A1-204ENST00000486023 FAR2Q96K12 515 aa16.65■□□□□ 0.26
COL6A1-204ENST00000486023 UBXN10Q96LJ8 280 aa16.65■□□□□ 0.26
COL6A1-204ENST00000486023 TUBB6Q9BUF5 446 aa16.65■□□□□ 0.26
COL6A1-204ENST00000486023 CAPS2Q9BXY5 557 aa16.65■□□□□ 0.26
COL6A1-204ENST00000486023 NMRAL1Q9HBL8 299 aa16.65■□□□□ 0.26
COL6A1-204ENST00000486023 ACOT9Q9Y305 439 aa16.65■□□□□ 0.26
COL6A1-204ENST00000486023 HECTD1Q9ULT8 2610 aa16.64■□□□□ 0.25
COL6A1-204ENST00000486023 LOC102723996A0A087X1L8 192 aa16.64■□□□□ 0.25
COL6A1-204ENST00000486023 DYTNA2CJ06 578 aa16.64■□□□□ 0.25
COL6A1-204ENST00000486023 ANKDD1BA6NHY2 528 aa16.64■□□□□ 0.25
COL6A1-204ENST00000486023 FAM227AF5H4B4 570 aa16.64■□□□□ 0.25
COL6A1-204ENST00000486023 UBXN8O00124 270 aa16.64■□□□□ 0.25
COL6A1-204ENST00000486023 PSMD12O00232 456 aaPredicted RBP16.64■□□□□ 0.25
COL6A1-204ENST00000486023 FHP07954 510 aa16.64■□□□□ 0.25
COL6A1-204ENST00000486023 LTA4HP09960 611 aaKnown RBP16.64■□□□□ 0.25
COL6A1-204ENST00000486023 ICAM2P13598 275 aa16.64■□□□□ 0.25
COL6A1-204ENST00000486023 IRF9Q00978 393 aa16.64■□□□□ 0.25
COL6A1-204ENST00000486023 NAB1Q13506 487 aa16.64■□□□□ 0.25
COL6A1-204ENST00000486023 ZNF169Q14929 603 aaPredicted RBP16.64■□□□□ 0.25
COL6A1-204ENST00000486023 NR6A1Q15406 480 aa16.64■□□□□ 0.25
COL6A1-204ENST00000486023 SFT2D3Q587I9 215 aa16.64■□□□□ 0.25
COL6A1-204ENST00000486023 FCRLBQ6BAA4 426 aa16.64■□□□□ 0.25
COL6A1-204ENST00000486023 PPP4R1Q8TF05 950 aa16.64■□□□□ 0.25
COL6A1-204ENST00000486023 KCTD4Q8WVF5 259 aa16.64■□□□□ 0.25
COL6A1-204ENST00000486023 PSMF1Q92530 271 aa16.64■□□□□ 0.25
COL6A1-204ENST00000486023 TRIM44Q96DX7 344 aaPredicted RBP16.64■□□□□ 0.25
COL6A1-204ENST00000486023 LMF1Q96S06 567 aa16.64■□□□□ 0.25
COL6A1-204ENST00000486023 SLC29A3Q9BZD2 475 aa16.64■□□□□ 0.25
COL6A1-204ENST00000486023 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.64■□□□□ 0.25
COL6A1-204ENST00000486023 IGSF5Q9NSI5 407 aa16.64■□□□□ 0.25
COL6A1-204ENST00000486023 SCN3AQ9NY46 2000 aa16.63■□□□□ 0.25
COL6A1-204ENST00000486023 COL12A1Q99715 3063 aa16.63■□□□□ 0.25
COL6A1-204ENST00000486023 A8MUA0 341 aa16.63■□□□□ 0.25
COL6A1-204ENST00000486023 PCDH17O14917 1159 aa16.63■□□□□ 0.25
COL6A1-204ENST00000486023 SERPINA6P08185 405 aa16.63■□□□□ 0.25
COL6A1-204ENST00000486023 AGTR2P50052 363 aa16.63■□□□□ 0.25
COL6A1-204ENST00000486023 OR4D2P58180 307 aa16.63■□□□□ 0.25
COL6A1-204ENST00000486023 BTG2P78543 158 aa16.63■□□□□ 0.25
COL6A1-204ENST00000486023 ZNF33BQ06732 778 aa16.63■□□□□ 0.25
COL6A1-204ENST00000486023 HYAL2Q12891 473 aa16.63■□□□□ 0.25
COL6A1-204ENST00000486023 DOC2AQ14183 400 aa16.63■□□□□ 0.25
COL6A1-204ENST00000486023 TLR1Q15399 786 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms