RNA–Protein interactions for RNA: ENST00000485967.1

SCAP-211, Transcript of SREBF chaperone, human

TSL 2

Gene SCAP, Length 508 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAP-211	ENST00000485967	CHST8	Q9H2A9	424 aa		13.16	□□□□□ -0.3
SCAP-211	ENST00000485967	GPN2	Q9H9Y4	310 aa	Predicted RBP	13.16	□□□□□ -0.3
SCAP-211	ENST00000485967	ANKH	Q9HCJ1	492 aa		13.16	□□□□□ -0.3
SCAP-211	ENST00000485967	ZNF304	Q9HCX3	659 aa		13.16	□□□□□ -0.3
SCAP-211	ENST00000485967	NKIRAS1	Q9NYS0	192 aa		13.16	□□□□□ -0.3
SCAP-211	ENST00000485967	IFT80	Q9P2H3	777 aa	Predicted RBP	13.16	□□□□□ -0.3
SCAP-211	ENST00000485967	ADGRE2	Q9UHX3	823 aa		13.16	□□□□□ -0.3
SCAP-211	ENST00000485967	SDK2	Q58EX2	2172 aa		13.15	□□□□□ -0.3
SCAP-211	ENST00000485967	LOC101059948	A0A1B0GTJ6	334 aa		13.15	□□□□□ -0.3
SCAP-211	ENST00000485967	WDR91	A4D1P6	747 aa		13.15	□□□□□ -0.3
SCAP-211	ENST00000485967	PPP6C	O00743	305 aa		13.15	□□□□□ -0.3
SCAP-211	ENST00000485967	CRCP	O75575	148 aa		13.15	□□□□□ -0.3
SCAP-211	ENST00000485967	CLEC3A	O75596	197 aa		13.15	□□□□□ -0.3
SCAP-211	ENST00000485967	OR1D4	P47884	311 aa		13.15	□□□□□ -0.3
SCAP-211	ENST00000485967	PKNOX1	P55347	436 aa		13.15	□□□□□ -0.3
SCAP-211	ENST00000485967	LCP2	Q13094	533 aa		13.15	□□□□□ -0.3
SCAP-211	ENST00000485967	IFT88	Q13099	833 aa		13.15	□□□□□ -0.3
SCAP-211	ENST00000485967	FAM53B	Q14153	422 aa		13.15	□□□□□ -0.3
SCAP-211	ENST00000485967	E2F2	Q14209	437 aa		13.15	□□□□□ -0.3
SCAP-211	ENST00000485967	ZRSR2	Q15696	482 aa	Known RBP	13.15	□□□□□ -0.3
SCAP-211	ENST00000485967	HHAT	Q5VTY9	493 aa		13.15	□□□□□ -0.3
SCAP-211	ENST00000485967	TMEM214	Q6NUQ4	689 aa	Known RBP	13.15	□□□□□ -0.3
SCAP-211	ENST00000485967	GPRIN3	Q6ZVF9	776 aa		13.15	□□□□□ -0.3
SCAP-211	ENST00000485967	ABHD13	Q7L211	337 aa		13.15	□□□□□ -0.3
SCAP-211	ENST00000485967	VASH2	Q86V25	355 aa		13.15	□□□□□ -0.3
SCAP-211	ENST00000485967	NUDCD3	Q8IVD9	361 aa		13.15	□□□□□ -0.3
SCAP-211	ENST00000485967	LAS2	Q8IYD9	372 aa		13.15	□□□□□ -0.3
SCAP-211	ENST00000485967	OR7G3	Q8NG95	312 aa		13.15	□□□□□ -0.3
SCAP-211	ENST00000485967	CREB3L4	Q8TEY5	395 aa		13.15	□□□□□ -0.3
SCAP-211	ENST00000485967	CT55	Q8WUE5	264 aa		13.15	□□□□□ -0.3
SCAP-211	ENST00000485967	ARL8A	Q96BM9	186 aa		13.15	□□□□□ -0.3
SCAP-211	ENST00000485967	MTFMT	Q96DP5	389 aa	Known RBP	13.15	□□□□□ -0.3
SCAP-211	ENST00000485967	MVB12A	Q96EY5	273 aa		13.15	□□□□□ -0.3
SCAP-211	ENST00000485967	MMAB	Q96EY8	250 aa	Predicted RBP	13.15	□□□□□ -0.3
SCAP-211	ENST00000485967	FAR2	Q96K12	515 aa		13.15	□□□□□ -0.3
SCAP-211	ENST00000485967	ATP6V1G3	Q96LB4	118 aa		13.15	□□□□□ -0.3
SCAP-211	ENST00000485967	C10orf90	Q96M02	699 aa		13.15	□□□□□ -0.3
SCAP-211	ENST00000485967	CCNL2	Q96S94	520 aa	Predicted RBP	13.15	□□□□□ -0.3
SCAP-211	ENST00000485967	RHBG	Q9H310	441 aa		13.15	□□□□□ -0.3
SCAP-211	ENST00000485967	GSTO2	Q9H4Y5	243 aa		13.15	□□□□□ -0.3
SCAP-211	ENST00000485967	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	13.15	□□□□□ -0.3
SCAP-211	ENST00000485967	KCND3	Q9UK17	655 aa		13.15	□□□□□ -0.3
SCAP-211	ENST00000485967	CROT	Q9UKG9	612 aa		13.15	□□□□□ -0.3
SCAP-211	ENST00000485967	MAU2	Q9Y6X3	613 aa		13.15	□□□□□ -0.3
SCAP-211	ENST00000485967	TLN1	Q9Y490	2541 aa	Known RBP	13.15	□□□□□ -0.3
SCAP-211	ENST00000485967		A0A0A6YYC8	382 aa	Predicted RBP	13.14	□□□□□ -0.31
SCAP-211	ENST00000485967	TMEM120B	A0PK00	339 aa		13.14	□□□□□ -0.31
SCAP-211	ENST00000485967	C21orf140	B9A014	251 aa		13.14	□□□□□ -0.31
SCAP-211	ENST00000485967		H0YIV9	168 aa		13.14	□□□□□ -0.31
SCAP-211	ENST00000485967		I3L1I5	382 aa	Predicted RBP	13.14	□□□□□ -0.31
SCAP-211	ENST00000485967	FFAR3	O14843	346 aa		13.14	□□□□□ -0.31
SCAP-211	ENST00000485967	GPR42	O15529	346 aa		13.14	□□□□□ -0.31
SCAP-211	ENST00000485967	OR4F21	O95013	312 aa		13.14	□□□□□ -0.31
SCAP-211	ENST00000485967	MED26	O95402	600 aa		13.14	□□□□□ -0.31
SCAP-211	ENST00000485967	BPGM	P07738	259 aa		13.14	□□□□□ -0.31
SCAP-211	ENST00000485967	CD63	P08962	238 aa		13.14	□□□□□ -0.31
SCAP-211	ENST00000485967	ZNF888	P0CJ79	500 aa	Predicted RBP	13.14	□□□□□ -0.31
SCAP-211	ENST00000485967	FBL	P22087	321 aa	Known RBP	13.14	□□□□□ -0.31
SCAP-211	ENST00000485967	HMOX2	P30519	316 aa		13.14	□□□□□ -0.31
SCAP-211	ENST00000485967	GCGR	P47871	477 aa		13.14	□□□□□ -0.31
SCAP-211	ENST00000485967	SERPINB4	P48594	390 aa		13.14	□□□□□ -0.31
SCAP-211	ENST00000485967	SKP1	P63208	163 aa		13.14	□□□□□ -0.31
SCAP-211	ENST00000485967	CXADR	P78310	365 aa		13.14	□□□□□ -0.31
SCAP-211	ENST00000485967	TGM3	Q08188	693 aa		13.14	□□□□□ -0.31
SCAP-211	ENST00000485967	TRAF3	Q13114	568 aa		13.14	□□□□□ -0.31
SCAP-211	ENST00000485967	DNASE1L3	Q13609	305 aa		13.14	□□□□□ -0.31
SCAP-211	ENST00000485967	SLC9A5	Q14940	896 aa		13.14	□□□□□ -0.31
SCAP-211	ENST00000485967	HERC3	Q15034	1050 aa		13.14	□□□□□ -0.31
SCAP-211	ENST00000485967	SGO1	Q5FBB7	561 aa		13.14	□□□□□ -0.31
SCAP-211	ENST00000485967	ARHGAP40	Q5TG30	622 aa		13.14	□□□□□ -0.31
SCAP-211	ENST00000485967	LCN10	Q6JVE6	187 aa		13.14	□□□□□ -0.31
SCAP-211	ENST00000485967	FRMD7	Q6ZUT3	714 aa		13.14	□□□□□ -0.31
SCAP-211	ENST00000485967	CHSY3	Q70JA7	882 aa		13.14	□□□□□ -0.31
SCAP-211	ENST00000485967	ZSCAN1	Q8NBB4	408 aa		13.14	□□□□□ -0.31
SCAP-211	ENST00000485967	METTL6	Q8TCB7	284 aa		13.14	□□□□□ -0.31
SCAP-211	ENST00000485967	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	13.14	□□□□□ -0.31
SCAP-211	ENST00000485967	CMTM7	Q96FZ5	175 aa		13.14	□□□□□ -0.31
SCAP-211	ENST00000485967	CNDP1	Q96KN2	507 aa		13.14	□□□□□ -0.31
SCAP-211	ENST00000485967	ZNF382	Q96SR6	550 aa		13.14	□□□□□ -0.31
SCAP-211	ENST00000485967	MTERF1	Q99551	399 aa	Known RBP	13.14	□□□□□ -0.31
SCAP-211	ENST00000485967	MECR	Q9BV79	373 aa		13.14	□□□□□ -0.31
SCAP-211	ENST00000485967	GATA5	Q9BWX5	397 aa	Predicted RBP	13.14	□□□□□ -0.31
SCAP-211	ENST00000485967	SLC6A16	Q9GZN6	736 aa		13.14	□□□□□ -0.31
SCAP-211	ENST00000485967	REXO4	Q9GZR2	422 aa	Known RBP	13.14	□□□□□ -0.31
SCAP-211	ENST00000485967	KLHL31	Q9H511	634 aa		13.14	□□□□□ -0.31
SCAP-211	ENST00000485967	ELOVL6	Q9H5J4	265 aa		13.14	□□□□□ -0.31
SCAP-211	ENST00000485967	MID1IP1	Q9NPA3	183 aa		13.14	□□□□□ -0.31
SCAP-211	ENST00000485967	SNX6	Q9UNH7	406 aa		13.14	□□□□□ -0.31
SCAP-211	ENST00000485967	FARSA	Q9Y285	508 aa	Known RBP	13.14	□□□□□ -0.31
SCAP-211	ENST00000485967	MRPS2	Q9Y399	296 aa	Known RBP	13.14	□□□□□ -0.31
SCAP-211	ENST00000485967	SLC22A7	Q9Y694	548 aa		13.14	□□□□□ -0.31
SCAP-211	ENST00000485967	SEC16A	O15027	2179 aa		13.14	□□□□□ -0.31
SCAP-211	ENST00000485967	LRIT2	A6NDA9	550 aa		13.13	□□□□□ -0.31
SCAP-211	ENST00000485967		H3BQF6	201 aa		13.13	□□□□□ -0.31
SCAP-211	ENST00000485967	SH3BGRL	O75368	114 aa		13.13	□□□□□ -0.31
SCAP-211	ENST00000485967	TGFB1	P01137	390 aa		13.13	□□□□□ -0.31
SCAP-211	ENST00000485967	KRT6A	P02538	564 aa		13.13	□□□□□ -0.31
SCAP-211	ENST00000485967	KRT6B	P04259	564 aa		13.13	□□□□□ -0.31
SCAP-211	ENST00000485967	LIF	P15018	202 aa		13.13	□□□□□ -0.31
SCAP-211	ENST00000485967	ALOX12	P18054	663 aa		13.13	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms