RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 MRPS2Q9Y399 296 aaKnown RBP15.07■□□□□ 0
APOE-205ENST00000485628 FIS1Q9Y3D6 152 aa15.07■□□□□ 0
APOE-205ENST00000485628 SPTBN4Q9H254 2564 aa15.06■□□□□ 0
APOE-205ENST00000485628 CCDC187A0A096LP49 1063 aa15.06■□□□□ 0
APOE-205ENST00000485628 PMS2P1A4D2B8 440 aa15.06■□□□□ 0
APOE-205ENST00000485628 TRPC5OSA6NMA1 111 aa15.06■□□□□ 0
APOE-205ENST00000485628 EFCAB7A8K855 629 aa15.06■□□□□ 0
APOE-205ENST00000485628 PLPP1O14494 284 aa15.06■□□□□ 0
APOE-205ENST00000485628 NDUFS4O43181 175 aa15.06■□□□□ 0
APOE-205ENST00000485628 FOXS1O43638 330 aa15.06■□□□□ 0
APOE-205ENST00000485628 CRCPO75575 148 aa15.06■□□□□ 0
APOE-205ENST00000485628 SLC35G6P0C7Q6 338 aa15.06■□□□□ 0
APOE-205ENST00000485628 BSGP35613 385 aa15.06■□□□□ 0
APOE-205ENST00000485628 ETV5P41161 510 aa15.06■□□□□ 0
APOE-205ENST00000485628 TSFMP43897 325 aaKnown RBP15.06■□□□□ 0
APOE-205ENST00000485628 ARL4DP49703 201 aa15.06■□□□□ 0
APOE-205ENST00000485628 IDH3AP50213 366 aa15.06■□□□□ 0
APOE-205ENST00000485628 PHEXP78562 749 aa15.06■□□□□ 0
APOE-205ENST00000485628 HMGCS1Q01581 520 aa15.06■□□□□ 0
APOE-205ENST00000485628 TARDBPQ13148 414 aaKnown RBP eCLIP15.06■□□□□ 0
APOE-205ENST00000485628 TUBB3Q13509 450 aa15.06■□□□□ 0
APOE-205ENST00000485628 CAMK2BQ13554 666 aa15.06■□□□□ 0
APOE-205ENST00000485628 PDCD2Q16342 344 aaPredicted RBP15.06■□□□□ 0
APOE-205ENST00000485628 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.06■□□□□ 0
APOE-205ENST00000485628 SLC9B1Q4ZJI4 515 aa15.06■□□□□ 0
APOE-205ENST00000485628 SGO1Q5FBB7 561 aa15.06■□□□□ 0
APOE-205ENST00000485628 VWA5B1Q5TIE3 1220 aa15.06■□□□□ 0
APOE-205ENST00000485628 YOD1Q5VVQ6 348 aaPredicted RBP15.06■□□□□ 0
APOE-205ENST00000485628 OGFOD2Q6N063 350 aa15.06■□□□□ 0
APOE-205ENST00000485628 ABHD17CQ6PCB6 329 aa15.06■□□□□ 0
APOE-205ENST00000485628 CHSY3Q70JA7 882 aa15.06■□□□□ 0
APOE-205ENST00000485628 RAB11FIP2Q7L804 512 aa15.06■□□□□ 0
APOE-205ENST00000485628 DGLUCYQ7Z3D6 616 aa15.06■□□□□ 0
APOE-205ENST00000485628 PIGWQ7Z7B1 504 aa15.06■□□□□ 0
APOE-205ENST00000485628 GALNT15Q8N3T1 639 aa15.06■□□□□ 0
APOE-205ENST00000485628 RFWD2Q8NHY2 731 aa15.06■□□□□ 0
APOE-205ENST00000485628 ACTRT2Q8TDY3 377 aa15.06■□□□□ 0
APOE-205ENST00000485628 TRIM55Q9BYV6 548 aa15.06■□□□□ 0
APOE-205ENST00000485628 REXO4Q9GZR2 422 aaKnown RBP15.06■□□□□ 0
APOE-205ENST00000485628 DDX31Q9H8H2 851 aaKnown RBP15.06■□□□□ 0
APOE-205ENST00000485628 STARD5Q9NSY2 213 aa15.06■□□□□ 0
APOE-205ENST00000485628 LOXL2Q9Y4K0 774 aa15.06■□□□□ 0
APOE-205ENST00000485628 PCDHB3Q9Y5E6 796 aa15.06■□□□□ 0
APOE-205ENST00000485628 PCDHGA3Q9Y5H0 932 aa15.06■□□□□ 0
APOE-205ENST00000485628 WDFY3Q8IZQ1 3526 aa15.06■□□□□ 0
APOE-205ENST00000485628 SKAP2O75563 359 aaPredicted RBP15.05■□□□□ -0
APOE-205ENST00000485628 OR2B3O76000 313 aa15.05■□□□□ -0
APOE-205ENST00000485628 TIAF1O95411 115 aa15.05■□□□□ -0
APOE-205ENST00000485628 ACPPP15309 386 aa15.05■□□□□ -0
APOE-205ENST00000485628 STXBP1P61764 594 aaKnown RBP15.05■□□□□ -0
APOE-205ENST00000485628 RAE1P78406 368 aaKnown RBP15.05■□□□□ -0
APOE-205ENST00000485628 RGS1Q08116 209 aa15.05■□□□□ -0
APOE-205ENST00000485628 DDX39BQ13838 428 aaKnown RBP15.05■□□□□ -0
APOE-205ENST00000485628 PUM1Q14671 1186 aaKnown RBP eCLIP15.05■□□□□ -0
APOE-205ENST00000485628 GRM7Q14831 915 aa15.05■□□□□ -0
APOE-205ENST00000485628 C6orf136Q5SQH8 315 aa15.05■□□□□ -0
APOE-205ENST00000485628 PRAMEF17Q5VTA0 474 aa15.05■□□□□ -0
APOE-205ENST00000485628 ZNF385CQ66K41 422 aaPredicted RBP15.05■□□□□ -0
APOE-205ENST00000485628 PWWP2BQ6NUJ5 590 aa15.05■□□□□ -0
APOE-205ENST00000485628 IGF2-ASQ6U949 168 aa15.05■□□□□ -0
APOE-205ENST00000485628 ZNF655Q8N720 491 aaPredicted RBP15.05■□□□□ -0
APOE-205ENST00000485628 WDR36Q8NI36 951 aaKnown RBP15.05■□□□□ -0
APOE-205ENST00000485628 GAL3ST3Q96A11 431 aa15.05■□□□□ -0
APOE-205ENST00000485628 APIPQ96GX9 242 aa15.05■□□□□ -0
APOE-205ENST00000485628 TEFMQ96QE5 360 aaKnown RBP15.05■□□□□ -0
APOE-205ENST00000485628 DDA1Q9BW61 102 aa15.05■□□□□ -0
APOE-205ENST00000485628 AKTIPQ9H8T0 292 aa15.05■□□□□ -0
APOE-205ENST00000485628 KLHL14Q9P2G3 628 aa15.05■□□□□ -0
APOE-205ENST00000485628 ADAM29Q9UKF5 820 aa15.05■□□□□ -0
APOE-205ENST00000485628 RARRES3Q9UL19 164 aa15.05■□□□□ -0
APOE-205ENST00000485628 PCDHGA8Q9Y5G5 932 aa15.05■□□□□ -0
APOE-205ENST00000485628 SCN3AQ9NY46 2000 aa15.04■□□□□ -0
APOE-205ENST00000485628 HYKKA2RU49 373 aa15.04■□□□□ -0
APOE-205ENST00000485628 PLD2O14939 933 aa15.04■□□□□ -0
APOE-205ENST00000485628 ZNF749O43361 778 aa15.04■□□□□ -0
APOE-205ENST00000485628 RGS14O43566 566 aa15.04■□□□□ -0
APOE-205ENST00000485628 SNX3O60493 162 aa15.04■□□□□ -0
APOE-205ENST00000485628 VPS4BO75351 444 aa15.04■□□□□ -0
APOE-205ENST00000485628 STATHP02808 62 aa15.04■□□□□ -0
APOE-205ENST00000485628 ITIH1P19827 911 aa15.04■□□□□ -0
APOE-205ENST00000485628 ITGAXP20702 1163 aa15.04■□□□□ -0
APOE-205ENST00000485628 HOXD11P31277 338 aaPredicted RBP15.04■□□□□ -0
APOE-205ENST00000485628 AQP5P55064 265 aa15.04■□□□□ -0
APOE-205ENST00000485628 FAM214AQ32MH5 1076 aa15.04■□□□□ -0
APOE-205ENST00000485628 RFTN2Q52LD8 501 aaPredicted RBP15.04■□□□□ -0
APOE-205ENST00000485628 TOR1AIP1Q5JTV8 583 aa15.04■□□□□ -0
APOE-205ENST00000485628 MRM1Q6IN84 353 aaKnown RBP15.04■□□□□ -0
APOE-205ENST00000485628 RHBDD2Q6NTF9 364 aa15.04■□□□□ -0
APOE-205ENST00000485628 CYB5D1Q6P9G0 228 aa15.04■□□□□ -0
APOE-205ENST00000485628 ZNF793Q6ZN11 406 aa15.04■□□□□ -0
APOE-205ENST00000485628 MED25Q71SY5 747 aa15.04■□□□□ -0
APOE-205ENST00000485628 ZFAND4Q86XD8 727 aa15.04■□□□□ -0
APOE-205ENST00000485628 PPP1R3BQ86XI6 285 aa15.04■□□□□ -0
APOE-205ENST00000485628 PDSS2Q86YH6 399 aa15.04■□□□□ -0
APOE-205ENST00000485628 AMER3Q8N944 861 aa15.04■□□□□ -0
APOE-205ENST00000485628 SLC38A9Q8NBW4 561 aa15.04■□□□□ -0
APOE-205ENST00000485628 SRFBP1Q8NEF9 429 aaKnown RBP15.04■□□□□ -0
APOE-205ENST00000485628 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.04■□□□□ -0
APOE-205ENST00000485628 C10orf82Q8WW14 230 aa15.04■□□□□ -0
APOE-205ENST00000485628 PMEPA1Q969W9 287 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms