RNA–Protein interactions for RNA: ENST00000485399.5

NECAB3-211, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 1,373 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-211ENST00000485399 NPIPB8E9PQR5 432 aa20.78■□□□□ 0.92
NECAB3-211ENST00000485399 NDUFS4O43181 175 aa20.78■□□□□ 0.92
NECAB3-211ENST00000485399 ATP6AP2O75787 350 aa20.78■□□□□ 0.92
NECAB3-211ENST00000485399 RSL1D1O76021 490 aaKnown RBP20.78■□□□□ 0.92
NECAB3-211ENST00000485399 PRPH2P23942 346 aa20.78■□□□□ 0.92
NECAB3-211ENST00000485399 EPHA3P29320 983 aa20.78■□□□□ 0.92
NECAB3-211ENST00000485399 VSX2P58304 361 aaPredicted RBP20.78■□□□□ 0.92
NECAB3-211ENST00000485399 STXBP1P61764 594 aaKnown RBP20.78■□□□□ 0.92
NECAB3-211ENST00000485399 INSM1Q01101 510 aaPredicted RBP20.78■□□□□ 0.92
NECAB3-211ENST00000485399 HMGCS1Q01581 520 aa20.78■□□□□ 0.92
NECAB3-211ENST00000485399 DEFB110Q30KQ9 67 aa20.78■□□□□ 0.92
NECAB3-211ENST00000485399 TMEM35AQ53FP2 167 aa20.78■□□□□ 0.92
NECAB3-211ENST00000485399 SPDYAQ5MJ70 313 aa20.78■□□□□ 0.92
NECAB3-211ENST00000485399 DEPDC1Q5TB30 811 aa20.78■□□□□ 0.92
NECAB3-211ENST00000485399 GKAP1Q5VSY0 366 aaPredicted RBP20.78■□□□□ 0.92
NECAB3-211ENST00000485399 OR4N4Q8N0Y3 316 aa20.78■□□□□ 0.92
NECAB3-211ENST00000485399 OR2T11Q8NH01 316 aa20.78■□□□□ 0.92
NECAB3-211ENST00000485399 CEP70Q8NHQ1 597 aa20.78■□□□□ 0.92
NECAB3-211ENST00000485399 C10orf82Q8WW14 230 aa20.78■□□□□ 0.92
NECAB3-211ENST00000485399 METTL2AQ96IZ6 378 aaKnown RBP20.78■□□□□ 0.92
NECAB3-211ENST00000485399 EBF4Q9BQW3 602 aa20.78■□□□□ 0.92
NECAB3-211ENST00000485399 SYNPO2LQ9H987 977 aa20.78■□□□□ 0.92
NECAB3-211ENST00000485399 ACACAQ13085 2346 aa20.78■□□□□ 0.92
NECAB3-211ENST00000485399 IGSF10Q6WRI0 2623 aa20.77■□□□□ 0.92
NECAB3-211ENST00000485399 GOLGA8QA0A0J9YX86 632 aa20.77■□□□□ 0.92
NECAB3-211ENST00000485399 GOLGA8OA6NCC3 632 aa20.77■□□□□ 0.92
NECAB3-211ENST00000485399 GOLGA8NF8WBI6 632 aa20.77■□□□□ 0.92
NECAB3-211ENST00000485399 NDUFAB1O14561 156 aa20.77■□□□□ 0.92
NECAB3-211ENST00000485399 EIF2S1P05198 315 aaKnown RBP20.77■□□□□ 0.92
NECAB3-211ENST00000485399 CCKBRP32239 447 aa20.77■□□□□ 0.92
NECAB3-211ENST00000485399 COL9A2Q14055 689 aaPredicted RBP20.77■□□□□ 0.92
NECAB3-211ENST00000485399 KCNAB1Q14722 419 aa20.77■□□□□ 0.92
NECAB3-211ENST00000485399 ATP6AP1LQ52LC2 224 aa20.77■□□□□ 0.92
NECAB3-211ENST00000485399 TCTE1Q5JU00 501 aa20.77■□□□□ 0.92
NECAB3-211ENST00000485399 KHDRBS2Q5VWX1 349 aaKnown RBP20.77■□□□□ 0.92
NECAB3-211ENST00000485399 CDCP2Q5VXM1 449 aa20.77■□□□□ 0.92
NECAB3-211ENST00000485399 NXNQ6DKJ4 435 aa20.77■□□□□ 0.92
NECAB3-211ENST00000485399 TMPRSS7Q7RTY8 843 aa20.77■□□□□ 0.92
NECAB3-211ENST00000485399 CSNK1A1LQ8N752 337 aa20.77■□□□□ 0.92
NECAB3-211ENST00000485399 RCBTB1Q8NDN9 531 aa20.77■□□□□ 0.92
NECAB3-211ENST00000485399 RILPQ96NA2 401 aa20.77■□□□□ 0.92
NECAB3-211ENST00000485399 OR51B5Q9H339 312 aa20.77■□□□□ 0.92
NECAB3-211ENST00000485399 AKTIPQ9H8T0 292 aa20.77■□□□□ 0.92
NECAB3-211ENST00000485399 FANCEQ9HB96 536 aa20.77■□□□□ 0.92
NECAB3-211ENST00000485399 LRTM1Q9HBL6 345 aa20.77■□□□□ 0.92
NECAB3-211ENST00000485399 TCF7L2Q9NQB0 619 aa20.77■□□□□ 0.92
NECAB3-211ENST00000485399 C1orf109Q9NX04 203 aa20.77■□□□□ 0.92
NECAB3-211ENST00000485399 AHSPQ9NZD4 102 aa20.77■□□□□ 0.92
NECAB3-211ENST00000485399 COL27A1Q8IZC6 1860 aaPredicted RBP20.76■□□□□ 0.91
NECAB3-211ENST00000485399 LRIT2A6NDA9 550 aa20.76■□□□□ 0.91
NECAB3-211ENST00000485399 URADA6NGE7 173 aa20.76■□□□□ 0.91
NECAB3-211ENST00000485399 LSM1O15116 133 aaKnown RBP20.76■□□□□ 0.91
NECAB3-211ENST00000485399 ZSCAN9O15535 394 aaPredicted RBP20.76■□□□□ 0.91
NECAB3-211ENST00000485399 HCRTR1O43613 425 aa20.76■□□□□ 0.91
NECAB3-211ENST00000485399 PEX11AO75192 247 aa20.76■□□□□ 0.91
NECAB3-211ENST00000485399 SEMA3DO95025 777 aa20.76■□□□□ 0.91
NECAB3-211ENST00000485399 TBX6O95947 436 aaPredicted RBP20.76■□□□□ 0.91
NECAB3-211ENST00000485399 LBPP18428 481 aa20.76■□□□□ 0.91
NECAB3-211ENST00000485399 CSTF2P33240 577 aaKnown RBP eCLIP20.76■□□□□ 0.91
NECAB3-211ENST00000485399 ACY1Q03154 408 aa20.76■□□□□ 0.91
NECAB3-211ENST00000485399 SMU1Q2TAY7 513 aa20.76■□□□□ 0.91
NECAB3-211ENST00000485399 ADPRMQ3LIE5 342 aa20.76■□□□□ 0.91
NECAB3-211ENST00000485399 TOR1AIP1Q5JTV8 583 aa20.76■□□□□ 0.91
NECAB3-211ENST00000485399 WASHC2DQ5SRD0 308 aa20.76■□□□□ 0.91
NECAB3-211ENST00000485399 LARP4Q71RC2 724 aaKnown RBP eCLIP20.76■□□□□ 0.91
NECAB3-211ENST00000485399 B3GNT8Q7Z7M8 397 aa20.76■□□□□ 0.91
NECAB3-211ENST00000485399 SRFBP1Q8NEF9 429 aaKnown RBP20.76■□□□□ 0.91
NECAB3-211ENST00000485399 ZNF285Q96NJ3 590 aa20.76■□□□□ 0.91
NECAB3-211ENST00000485399 OR52B2Q96RD2 323 aa20.76■□□□□ 0.91
NECAB3-211ENST00000485399 F2RL3Q96RI0 385 aa20.76■□□□□ 0.91
NECAB3-211ENST00000485399 SLC6A16Q9GZN6 736 aa20.76■□□□□ 0.91
NECAB3-211ENST00000485399 CCDC86Q9H6F5 360 aaKnown RBP20.76■□□□□ 0.91
NECAB3-211ENST00000485399 SH3BGRLO75368 114 aa20.75■□□□□ 0.91
NECAB3-211ENST00000485399 SEC22BO75396 215 aa20.75■□□□□ 0.91
NECAB3-211ENST00000485399 ETHE1O95571 254 aa20.75■□□□□ 0.91
NECAB3-211ENST00000485399 STATHP02808 62 aa20.75■□□□□ 0.91
NECAB3-211ENST00000485399 PRR35P0CG20 571 aa20.75■□□□□ 0.91
NECAB3-211ENST00000485399 FOLR1P15328 257 aa20.75■□□□□ 0.91
NECAB3-211ENST00000485399 RAP1GDS1P52306 607 aa20.75■□□□□ 0.91
NECAB3-211ENST00000485399 ARFIP1P53367 373 aa20.75■□□□□ 0.91
NECAB3-211ENST00000485399 TGM3Q08188 693 aa20.75■□□□□ 0.91
NECAB3-211ENST00000485399 HYAL2Q12891 473 aa20.75■□□□□ 0.91
NECAB3-211ENST00000485399 AP5B1Q2VPB7 878 aa20.75■□□□□ 0.91
NECAB3-211ENST00000485399 LSM12Q3MHD2 195 aaKnown RBP20.75■□□□□ 0.91
NECAB3-211ENST00000485399 GALNTL6Q49A17 601 aa20.75■□□□□ 0.91
NECAB3-211ENST00000485399 CYB5D1Q6P9G0 228 aa20.75■□□□□ 0.91
NECAB3-211ENST00000485399 ZFAND4Q86XD8 727 aa20.75■□□□□ 0.91
NECAB3-211ENST00000485399 AGBL5Q8NDL9 886 aa20.75■□□□□ 0.91
NECAB3-211ENST00000485399 RGMAQ96B86 450 aa20.75■□□□□ 0.91
NECAB3-211ENST00000485399 STRADBQ9C0K7 418 aa20.75■□□□□ 0.91
NECAB3-211ENST00000485399 REXO4Q9GZR2 422 aaKnown RBP20.75■□□□□ 0.91
NECAB3-211ENST00000485399 AKAP7Q9P0M2 348 aaPredicted RBP20.75■□□□□ 0.91
NECAB3-211ENST00000485399 SERTAD3Q9UJW9 196 aa20.75■□□□□ 0.91
NECAB3-211ENST00000485399 ARL2BPQ9Y2Y0 163 aa20.75■□□□□ 0.91
NECAB3-211ENST00000485399 TMEM150CB9EJG8 249 aa20.74■□□□□ 0.91
NECAB3-211ENST00000485399 P2RX6O15547 441 aa20.74■□□□□ 0.91
NECAB3-211ENST00000485399 MT-CO3P00414 261 aa20.74■□□□□ 0.91
NECAB3-211ENST00000485399 HNRNPH1P31943 449 aaKnown RBP20.74■□□□□ 0.91
NECAB3-211ENST00000485399 PDX1P52945 283 aa20.74■□□□□ 0.91
NECAB3-211ENST00000485399 ACSM2AQ08AH3 577 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms