RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 SNAP47Q5SQN1 464 aa13.86□□□□□ -0.19
LRIF1-202ENST00000485275 HOMEZQ8IX15 550 aa13.86□□□□□ -0.19
LRIF1-202ENST00000485275 MIER2Q8N344 545 aa13.86□□□□□ -0.19
LRIF1-202ENST00000485275 ARHGEF39Q8N4T4 335 aa13.86□□□□□ -0.19
LRIF1-202ENST00000485275 NT5CQ8TCD5 201 aa13.86□□□□□ -0.19
LRIF1-202ENST00000485275 TMEM74Q96NL1 305 aa13.86□□□□□ -0.19
LRIF1-202ENST00000485275 CD180Q99467 661 aa13.86□□□□□ -0.19
LRIF1-202ENST00000485275 C17orf62Q9BQA9 187 aa13.86□□□□□ -0.19
LRIF1-202ENST00000485275 ZMYND15Q9H091 742 aa13.86□□□□□ -0.19
LRIF1-202ENST00000485275 PRM3Q9NNZ6 103 aa13.86□□□□□ -0.19
LRIF1-202ENST00000485275 STARD5Q9NSY2 213 aa13.86□□□□□ -0.19
LRIF1-202ENST00000485275 SIRT5Q9NXA8 310 aa13.86□□□□□ -0.19
LRIF1-202ENST00000485275 TMED5Q9Y3A6 229 aa13.86□□□□□ -0.19
LRIF1-202ENST00000485275 EP300Q09472 2414 aaPredicted RBP13.85□□□□□ -0.19
LRIF1-202ENST00000485275 LOC100653049A0A140TA62 436 aa13.85□□□□□ -0.19
LRIF1-202ENST00000485275 PCDH7O60245 1069 aa13.85□□□□□ -0.19
LRIF1-202ENST00000485275 RASSF9O75901 435 aa13.85□□□□□ -0.19
LRIF1-202ENST00000485275 KRT34O76011 436 aa13.85□□□□□ -0.19
LRIF1-202ENST00000485275 MED26O95402 600 aa13.85□□□□□ -0.19
LRIF1-202ENST00000485275 ACPPP15309 386 aa13.85□□□□□ -0.19
LRIF1-202ENST00000485275 CAPN3P20807 821 aa13.85□□□□□ -0.19
LRIF1-202ENST00000485275 SEPHS1P49903 392 aa13.85□□□□□ -0.19
LRIF1-202ENST00000485275 PLA2G16P53816 162 aa13.85□□□□□ -0.19
LRIF1-202ENST00000485275 SQSTM1Q13501 440 aa13.85□□□□□ -0.19
LRIF1-202ENST00000485275 AGKQ53H12 422 aa13.85□□□□□ -0.19
LRIF1-202ENST00000485275 CACHD1Q5VU97 1274 aa13.85□□□□□ -0.19
LRIF1-202ENST00000485275 ZNF771Q7L3S4 317 aaPredicted RBP13.85□□□□□ -0.19
LRIF1-202ENST00000485275 PRSS42Q7Z5A4 293 aa13.85□□□□□ -0.19
LRIF1-202ENST00000485275 SNX32Q86XE0 403 aa13.85□□□□□ -0.19
LRIF1-202ENST00000485275 PLXDC1Q8IUK5 500 aa13.85□□□□□ -0.19
LRIF1-202ENST00000485275 DTWD1Q8N5C7 304 aa13.85□□□□□ -0.19
LRIF1-202ENST00000485275 TRPV3Q8NET8 790 aa13.85□□□□□ -0.19
LRIF1-202ENST00000485275 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.85□□□□□ -0.192e-10■■■■□ 21.3
LRIF1-202ENST00000485275 RHBDD1Q8TEB9 315 aa13.85□□□□□ -0.19
LRIF1-202ENST00000485275 PHOX2BQ99453 314 aa13.85□□□□□ -0.19
LRIF1-202ENST00000485275 LRRN3Q9H3W5 708 aa13.85□□□□□ -0.19
LRIF1-202ENST00000485275 TMEM9BQ9NQ34 198 aa13.85□□□□□ -0.19
LRIF1-202ENST00000485275 NCDNQ9UBB6 729 aa13.85□□□□□ -0.19
LRIF1-202ENST00000485275 EXO1Q9UQ84 846 aaKnown RBP13.85□□□□□ -0.19
LRIF1-202ENST00000485275 EIF3LQ9Y262 564 aaKnown RBP13.85□□□□□ -0.19
LRIF1-202ENST00000485275 RUVBL1Q9Y265 456 aaKnown RBP13.85□□□□□ -0.19
LRIF1-202ENST00000485275 SPTBP11277 2137 aa13.85□□□□□ -0.19
LRIF1-202ENST00000485275 SCN3AQ9NY46 2000 aa13.84□□□□□ -0.19
LRIF1-202ENST00000485275 ASPDHA6ND91 283 aa13.84□□□□□ -0.19
LRIF1-202ENST00000485275 A8MU76 341 aa13.84□□□□□ -0.19
LRIF1-202ENST00000485275 SLC22A2O15244 555 aa13.84□□□□□ -0.19
LRIF1-202ENST00000485275 ERI3O43414 337 aaKnown RBP13.84□□□□□ -0.19
LRIF1-202ENST00000485275 TMPRSS11DO60235 418 aa13.84□□□□□ -0.19
LRIF1-202ENST00000485275 KLK1P06870 262 aa13.84□□□□□ -0.19
LRIF1-202ENST00000485275 JAK1P23458 1154 aa13.84□□□□□ -0.19
LRIF1-202ENST00000485275 VSX2P58304 361 aaPredicted RBP13.84□□□□□ -0.19
LRIF1-202ENST00000485275 RAB8AP61006 207 aa13.84□□□□□ -0.19
LRIF1-202ENST00000485275 STX1BP61266 288 aa13.84□□□□□ -0.19
LRIF1-202ENST00000485275 MAD2L1Q13257 205 aaPredicted RBP13.84□□□□□ -0.19
LRIF1-202ENST00000485275 SUZ12Q15022 739 aaKnown RBP13.84□□□□□ -0.19
LRIF1-202ENST00000485275 ABHD17CQ6PCB6 329 aa13.84□□□□□ -0.19
LRIF1-202ENST00000485275 PRSS41Q7RTY9 318 aa13.84□□□□□ -0.19
LRIF1-202ENST00000485275 NAXDQ8IW45 347 aa13.84□□□□□ -0.19
LRIF1-202ENST00000485275 MMP21Q8N119 569 aa13.84□□□□□ -0.19
LRIF1-202ENST00000485275 TBC1D19Q8N5T2 526 aa13.84□□□□□ -0.19
LRIF1-202ENST00000485275 ZCCHC10Q8TBK6 192 aa13.84□□□□□ -0.19
LRIF1-202ENST00000485275 GFM2Q969S9 779 aaKnown RBP13.84□□□□□ -0.19
LRIF1-202ENST00000485275 TCTN2Q96GX1 697 aa13.84□□□□□ -0.19
LRIF1-202ENST00000485275 METTL2AQ96IZ6 378 aaKnown RBP13.84□□□□□ -0.19
LRIF1-202ENST00000485275 PRDM7Q9NQW5 492 aa13.84□□□□□ -0.19
LRIF1-202ENST00000485275 ZIM2Q9NZV7 527 aa13.84□□□□□ -0.19
LRIF1-202ENST00000485275 A0A0A6YYD5 115 aa13.83□□□□□ -0.19
LRIF1-202ENST00000485275 C4orf47A7E2U8 309 aa13.83□□□□□ -0.19
LRIF1-202ENST00000485275 H3BMH7 237 aa13.83□□□□□ -0.19
LRIF1-202ENST00000485275 NTN3O00634 580 aaPredicted RBP13.83□□□□□ -0.19
LRIF1-202ENST00000485275 FBP2O00757 339 aa13.83□□□□□ -0.19
LRIF1-202ENST00000485275 UNC5CO95185 931 aa13.83□□□□□ -0.19
LRIF1-202ENST00000485275 LRATO95237 230 aa13.83□□□□□ -0.19
LRIF1-202ENST00000485275 ZBTB11O95625 1053 aaPredicted RBP13.83□□□□□ -0.19
LRIF1-202ENST00000485275 CPNE6O95741 557 aa13.83□□□□□ -0.19
LRIF1-202ENST00000485275 LDOC1O95751 146 aaPredicted RBP13.83□□□□□ -0.19
LRIF1-202ENST00000485275 EIF2S1P05198 315 aaKnown RBP13.83□□□□□ -0.19
LRIF1-202ENST00000485275 ANXA4P09525 319 aaPredicted RBP13.83□□□□□ -0.19
LRIF1-202ENST00000485275 ZNF888P0CJ79 500 aaPredicted RBP13.83□□□□□ -0.19
LRIF1-202ENST00000485275 THRAP10827 490 aa13.83□□□□□ -0.19
LRIF1-202ENST00000485275 COX4I1P13073 169 aa13.83□□□□□ -0.19
LRIF1-202ENST00000485275 CKMT2P17540 419 aa13.83□□□□□ -0.19
LRIF1-202ENST00000485275 ACP1P24666 158 aa13.83□□□□□ -0.19
LRIF1-202ENST00000485275 ADSLP30566 484 aaPredicted RBP13.83□□□□□ -0.19
LRIF1-202ENST00000485275 MLLT3P42568 568 aaPredicted RBP13.83□□□□□ -0.19
LRIF1-202ENST00000485275 ACADVLP49748 655 aa13.83□□□□□ -0.19
LRIF1-202ENST00000485275 PDX1P52945 283 aa13.83□□□□□ -0.19
LRIF1-202ENST00000485275 NCALDP61601 193 aa13.83□□□□□ -0.19
LRIF1-202ENST00000485275 SLC14A1Q13336 389 aa13.83□□□□□ -0.19
LRIF1-202ENST00000485275 PWP1Q13610 501 aa13.83□□□□□ -0.19
LRIF1-202ENST00000485275 RCAN2Q14206 197 aa13.83□□□□□ -0.19
LRIF1-202ENST00000485275 TMEM71Q6P5X7 295 aa13.83□□□□□ -0.19
LRIF1-202ENST00000485275 CCDC121Q6ZUS5 278 aa13.83□□□□□ -0.19
LRIF1-202ENST00000485275 MCATQ8IVS2 390 aaKnown RBP13.83□□□□□ -0.19
LRIF1-202ENST00000485275 RIMKLAQ8IXN7 391 aa13.83□□□□□ -0.19
LRIF1-202ENST00000485275 RCBTB1Q8NDN9 531 aa13.83□□□□□ -0.19
LRIF1-202ENST00000485275 OR2L5Q8NG80 312 aa13.83□□□□□ -0.19
LRIF1-202ENST00000485275 UTP15Q8TED0 518 aaKnown RBP13.83□□□□□ -0.19
LRIF1-202ENST00000485275 SLC7A6OSQ96CW6 309 aaPredicted RBP13.83□□□□□ -0.19
LRIF1-202ENST00000485275 THAP11Q96EK4 314 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms