RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	PRSS35	Q8N3Z0	413 aa		3.58	□□□□□ -1.84
VPS8-223	ENST00000485024	ANKRD13C	Q8N6S4	541 aa		3.58	□□□□□ -1.84
VPS8-223	ENST00000485024	CCDC63	Q8NA47	563 aa		3.58	□□□□□ -1.84
VPS8-223	ENST00000485024	OR2T12	Q8NG77	320 aa		3.58	□□□□□ -1.84
VPS8-223	ENST00000485024	OR1J1	Q8NGS3	322 aa		3.58	□□□□□ -1.84
VPS8-223	ENST00000485024	FGFBP3	Q8TAT2	258 aa		3.58	□□□□□ -1.84
VPS8-223	ENST00000485024	ZNF473	Q8WTR7	871 aa	Known RBP	3.58	□□□□□ -1.84
VPS8-223	ENST00000485024	PHLDA1	Q8WV24	401 aa	Predicted RBP	3.58	□□□□□ -1.84
VPS8-223	ENST00000485024	BCL2L2	Q92843	193 aa	Predicted RBP	3.58	□□□□□ -1.84
VPS8-223	ENST00000485024	TSACC	Q96A04	125 aa	Predicted RBP	3.58	□□□□□ -1.84
VPS8-223	ENST00000485024	PYCR2	Q96C36	320 aa		3.58	□□□□□ -1.84
VPS8-223	ENST00000485024	AP2M1	Q96CW1	435 aa		3.58	□□□□□ -1.84
VPS8-223	ENST00000485024	IGSF21	Q96ID5	467 aa		3.58	□□□□□ -1.84
VPS8-223	ENST00000485024	C17orf77	Q96MU5	243 aa		3.58	□□□□□ -1.84
VPS8-223	ENST00000485024	NAP1L3	Q99457	506 aa	Predicted RBP	3.58	□□□□□ -1.84
VPS8-223	ENST00000485024	IDI2	Q9BXS1	227 aa		3.58	□□□□□ -1.84
VPS8-223	ENST00000485024	SLC2A11	Q9BYW1	496 aa		3.58	□□□□□ -1.84
VPS8-223	ENST00000485024	FAM49A	Q9H0Q0	323 aa	Predicted RBP	3.58	□□□□□ -1.84
VPS8-223	ENST00000485024	UBQLN3	Q9H347	655 aa		3.58	□□□□□ -1.84
VPS8-223	ENST00000485024	GPR173	Q9NS66	373 aa		3.58	□□□□□ -1.84
VPS8-223	ENST00000485024	ANO10	Q9NW15	660 aa		3.58	□□□□□ -1.84
VPS8-223	ENST00000485024	AKAP7	Q9P0M2	348 aa	Predicted RBP	3.58	□□□□□ -1.84
VPS8-223	ENST00000485024	SLC12A6	Q9UHW9	1150 aa		3.58	□□□□□ -1.84
VPS8-223	ENST00000485024	GMEB2	Q9UKD1	530 aa		3.58	□□□□□ -1.84
VPS8-223	ENST00000485024	MAN1B1	Q9UKM7	699 aa		3.58	□□□□□ -1.84
VPS8-223	ENST00000485024	TMED3	Q9Y3Q3	217 aa		3.58	□□□□□ -1.84
VPS8-223	ENST00000485024	RIMS2	Q9UQ26	1411 aa		3.58	□□□□□ -1.84
VPS8-223	ENST00000485024	PIK3C2B	O00750	1634 aa		3.58	□□□□□ -1.84
VPS8-223	ENST00000485024	PEAK1	Q9H792	1746 aa		3.58	□□□□□ -1.84
VPS8-223	ENST00000485024	ZNF292	O60281	2723 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	TRBV2	A0A0J9YWF9	115 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	RNF103-CHMP3	A0A140T963	221 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	SYCE3	A1L190	88 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	C5orf60	A6NFR6	353 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	RNF103	O00237	685 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	SCO2	O43819	266 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	PRAF2	O60831	178 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	CTSV	O60911	334 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	SEC22B	O75396	215 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	ZFYVE9	O95405	1425 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	SERPINB2	P05120	415 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	TYMP	P19971	482 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	CDH3	P22223	829 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	JAK1	P23458	1154 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	CD27	P26842	260 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	MAPK3	P27361	379 aa	Predicted RBP	3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	CSTF2	P33240	577 aa	Known RBP eCLIP	3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	SFTPD	P35247	375 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	CLK1	P49759	484 aa	Known RBP	3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	GSDMD	P57764	484 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	BRWD1-AS2	P59051	145 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	POU3F1	Q03052	451 aa	Predicted RBP	3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	MBTD1	Q05BQ5	628 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	DMP1	Q13316	513 aa	Predicted RBP	3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	TSTA3	Q13630	321 aa	Predicted RBP	3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	STXBP2	Q15833	593 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	ACKR1	Q16570	336 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	ARHGAP31	Q2M1Z3	1444 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	ITPRIPL2	Q3MIP1	535 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	IFI44L	Q53G44	452 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	PARP10	Q53GL7	1025 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	FAM76B	Q5HYJ3	339 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	TOR1AIP1	Q5JTV8	583 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	SIRPB2	Q5JXA9	342 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	SLC35D3	Q5M8T2	416 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	C20orf194	Q5TEA3	1177 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	NHLRC1	Q6VVB1	395 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	TOM1L2	Q6ZVM7	507 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	SMG6	Q86US8	1419 aa	Known RBP	3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	ERC1	Q8IUD2	1116 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	TMEM139	Q8IV31	216 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	MMD2	Q8IY49	270 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	KLHDC8A	Q8IYD2	350 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	ZNF444	Q8N0Y2	327 aa	Predicted RBP	3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	ZNF619	Q8N2I2	560 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	ZNF441	Q8N8Z8	693 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	ANKRD20A12P	Q8NF67	263 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	OR52N5	Q8NH56	324 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	SECTM1	Q8WVN6	248 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	HSD17B8	Q92506	261 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	GDAP1L1	Q96MZ0	367 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	TSSK2	Q96PF2	358 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	CSTL1	Q9H114	145 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	ABCG8	Q9H221	673 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	C6orf106	Q9H6K1	298 aa	Predicted RBP	3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	C10orf88	Q9H8K7	445 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	RNF121	Q9H920	327 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	UPF2	Q9HAU5	1272 aa	Known RBP	3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	PRMT8	Q9NR22	394 aa	Predicted RBP	3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	FLRT3	Q9NZU0	649 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	DAPK2	Q9UIK4	370 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	APPL1	Q9UKG1	709 aa		3.57	□□□□□ -1.84
VPS8-223	ENST00000485024	CASKIN1	Q8WXD9	1431 aa		3.56	□□□□□ -1.84
VPS8-223	ENST00000485024	INSR	P06213	1382 aa		3.56	□□□□□ -1.84
VPS8-223	ENST00000485024	TRAV18	A0A075B6X5	111 aa		3.56	□□□□□ -1.84
VPS8-223	ENST00000485024	ANTXRL	A6NF34	631 aa		3.56	□□□□□ -1.84
VPS8-223	ENST00000485024	CCDC69	A6NI79	296 aa		3.56	□□□□□ -1.84
VPS8-223	ENST00000485024	SLC9B1P1	A6NJY1	282 aa		3.56	□□□□□ -1.84
VPS8-223	ENST00000485024	SRRM3	A6NNA2	597 aa	Predicted RBP	3.56	□□□□□ -1.84
VPS8-223	ENST00000485024	XPNPEP2	O43895	674 aa		3.56	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms