RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 TSNAXIP1Q2TAA8 658 aa15.36■□□□□ 0.05
DDR1-246ENST00000485023 KIRREL2Q6UWL6 708 aa15.36■□□□□ 0.05
DDR1-246ENST00000485023 ABHD13Q7L211 337 aa15.36■□□□□ 0.05
DDR1-246ENST00000485023 PRICKLE2Q7Z3G6 844 aa15.36■□□□□ 0.05
DDR1-246ENST00000485023 CLEC1AQ8NC01 280 aa15.36■□□□□ 0.05
DDR1-246ENST00000485023 TRPV3Q8NET8 790 aa15.36■□□□□ 0.05
DDR1-246ENST00000485023 FDCSPQ8NFU4 85 aa15.36■□□□□ 0.05
DDR1-246ENST00000485023 UTP15Q8TED0 518 aaKnown RBP15.36■□□□□ 0.05
DDR1-246ENST00000485023 MTBPQ96DY7 904 aa15.36■□□□□ 0.05
DDR1-246ENST00000485023 PHF21BQ96EK2 531 aa15.36■□□□□ 0.05
DDR1-246ENST00000485023 PEX11GQ96HA9 241 aa15.36■□□□□ 0.05
DDR1-246ENST00000485023 FER1L6-AS2Q96M78 137 aa15.36■□□□□ 0.05
DDR1-246ENST00000485023 IP6K3Q96PC2 410 aa15.36■□□□□ 0.05
DDR1-246ENST00000485023 CCDC77Q9BR77 488 aa15.36■□□□□ 0.05
DDR1-246ENST00000485023 SLC6A16Q9GZN6 736 aa15.36■□□□□ 0.05
DDR1-246ENST00000485023 AICDAQ9GZX7 198 aa15.36■□□□□ 0.05
DDR1-246ENST00000485023 EHD1Q9H4M9 534 aa15.36■□□□□ 0.05
DDR1-246ENST00000485023 MKL2Q9ULH7 1088 aa15.36■□□□□ 0.05
DDR1-246ENST00000485023 KALRNO60229 2985 aa15.36■□□□□ 0.05
DDR1-246ENST00000485023 ANKDD1BA6NHY2 528 aa15.35■□□□□ 0.05
DDR1-246ENST00000485023 SMIM24O75264 130 aa15.35■□□□□ 0.05
DDR1-246ENST00000485023 SH3BGRLO75368 114 aa15.35■□□□□ 0.05
DDR1-246ENST00000485023 IGHEP01854 428 aa15.35■□□□□ 0.05
DDR1-246ENST00000485023 RBP1P09455 135 aa15.35■□□□□ 0.05
DDR1-246ENST00000485023 PCNAP12004 261 aa15.35■□□□□ 0.05
DDR1-246ENST00000485023 EPB42P16452 691 aa15.35■□□□□ 0.05
DDR1-246ENST00000485023 EEF1DP29692 281 aaKnown RBP15.35■□□□□ 0.05
DDR1-246ENST00000485023 HNRNPH1P31943 449 aaKnown RBP15.35■□□□□ 0.05
DDR1-246ENST00000485023 ARL1P40616 181 aaPredicted RBP15.35■□□□□ 0.05
DDR1-246ENST00000485023 PGDP52209 483 aa15.35■□□□□ 0.05
DDR1-246ENST00000485023 NAA30Q147X3 362 aaPredicted RBP15.35■□□□□ 0.05
DDR1-246ENST00000485023 TUBB8Q3ZCM7 444 aa15.35■□□□□ 0.05
DDR1-246ENST00000485023 PAGE2BQ5JRK9 111 aa15.35■□□□□ 0.05
DDR1-246ENST00000485023 ASB18Q6ZVZ8 466 aa15.35■□□□□ 0.05
DDR1-246ENST00000485023 VN1R5Q7Z5H4 357 aa15.35■□□□□ 0.05
DDR1-246ENST00000485023 AFAP1L2Q8N4X5 818 aa15.35■□□□□ 0.05
DDR1-246ENST00000485023 OR11G2Q8NGC1 345 aa15.35■□□□□ 0.05
DDR1-246ENST00000485023 EPS8L3Q8TE67 593 aaKnown RBP15.35■□□□□ 0.05
DDR1-246ENST00000485023 EFCAB11Q9BUY7 163 aa15.35■□□□□ 0.05
DDR1-246ENST00000485023 NUDT9Q9BW91 350 aa15.35■□□□□ 0.05
DDR1-246ENST00000485023 RHBGQ9H310 441 aa15.35■□□□□ 0.05
DDR1-246ENST00000485023 ZNF490Q9ULM2 529 aaPredicted RBP15.35■□□□□ 0.05
DDR1-246ENST00000485023 HEMK1Q9Y5R4 338 aaPredicted RBP15.35■□□□□ 0.05
DDR1-246ENST00000485023 B8ZZF3 427 aa15.34■□□□□ 0.05
DDR1-246ENST00000485023 ERI3O43414 337 aaKnown RBP15.34■□□□□ 0.05
DDR1-246ENST00000485023 KLK8O60259 260 aa15.34■□□□□ 0.05
DDR1-246ENST00000485023 BMP10O95393 424 aa15.34■□□□□ 0.05
DDR1-246ENST00000485023 SERPINA6P08185 405 aa15.34■□□□□ 0.05
DDR1-246ENST00000485023 COL6A2P12110 1019 aa15.34■□□□□ 0.05
DDR1-246ENST00000485023 ITGA3P26006 1051 aa15.34■□□□□ 0.05
DDR1-246ENST00000485023 HSD17B3P37058 310 aa15.34■□□□□ 0.05
DDR1-246ENST00000485023 DDX39BQ13838 428 aaKnown RBP15.34■□□□□ 0.05
DDR1-246ENST00000485023 GTF2H2Q13888 395 aa15.34■□□□□ 0.05
DDR1-246ENST00000485023 HIST2H2ACQ16777 129 aaPredicted RBP15.34■□□□□ 0.05
DDR1-246ENST00000485023 HIST2H2AA3Q6FI13 130 aa15.34■□□□□ 0.05
DDR1-246ENST00000485023 GTF2H2CQ6P1K8 395 aa15.34■□□□□ 0.05
DDR1-246ENST00000485023 GOLGA7Q7Z5G4 137 aa15.34■□□□□ 0.05
DDR1-246ENST00000485023 PARP9Q8IXQ6 854 aa15.34■□□□□ 0.05
DDR1-246ENST00000485023 GALNT16Q8N428 558 aa15.34■□□□□ 0.05
DDR1-246ENST00000485023 AMER2Q8N7J2 671 aa15.34■□□□□ 0.05
DDR1-246ENST00000485023 TTLQ8NG68 377 aa15.34■□□□□ 0.05
DDR1-246ENST00000485023 OR2W6PQ8NHA6 318 aa15.34■□□□□ 0.05
DDR1-246ENST00000485023 WDR34Q96EX3 536 aa15.34■□□□□ 0.05
DDR1-246ENST00000485023 TGIF2Q9GZN2 237 aa15.34■□□□□ 0.05
DDR1-246ENST00000485023 MRPL46Q9H2W6 279 aaKnown RBP15.34■□□□□ 0.05
DDR1-246ENST00000485023 NT5DC2Q9H857 520 aa15.34■□□□□ 0.05
DDR1-246ENST00000485023 ACTR8Q9H981 624 aa15.34■□□□□ 0.05
DDR1-246ENST00000485023 ZNF160Q9HCG1 818 aa15.34■□□□□ 0.05
DDR1-246ENST00000485023 GPR83Q9NYM4 423 aa15.34■□□□□ 0.05
DDR1-246ENST00000485023 FETUBQ9UGM5 382 aa15.34■□□□□ 0.05
DDR1-246ENST00000485023 G3BP2Q9UN86 482 aaKnown RBP15.34■□□□□ 0.05
DDR1-246ENST00000485023 CCDC88CQ9P219 2028 aa15.33■□□□□ 0.04
DDR1-246ENST00000485023 IGHV3-20A0A0C4DH32 117 aa15.33■□□□□ 0.04
DDR1-246ENST00000485023 A0A1W2PPM1 405 aa15.33■□□□□ 0.04
DDR1-246ENST00000485023 CCDC189A1A4V9 331 aa15.33■□□□□ 0.04
DDR1-246ENST00000485023 URADA6NGE7 173 aa15.33■□□□□ 0.04
DDR1-246ENST00000485023 CHST10O43529 356 aa15.33■□□□□ 0.04
DDR1-246ENST00000485023 SLC28A2O43868 658 aa15.33■□□□□ 0.04
DDR1-246ENST00000485023 PYGBP11216 843 aa15.33■□□□□ 0.04
DDR1-246ENST00000485023 PLA2G16P53816 162 aa15.33■□□□□ 0.04
DDR1-246ENST00000485023 STXBP1P61764 594 aaKnown RBP15.33■□□□□ 0.04
DDR1-246ENST00000485023 SKP1P63208 163 aa15.33■□□□□ 0.04
DDR1-246ENST00000485023 BTN3A2P78410 334 aa15.33■□□□□ 0.04
DDR1-246ENST00000485023 LAPTM5Q13571 262 aa15.33■□□□□ 0.04
DDR1-246ENST00000485023 PCBP2Q15366 365 aaKnown RBP eCLIP15.33■□□□□ 0.04
DDR1-246ENST00000485023 ERCC6LQ2NKX8 1250 aa15.33■□□□□ 0.04
DDR1-246ENST00000485023 TCTN3Q6NUS6 607 aa15.33■□□□□ 0.04
DDR1-246ENST00000485023 MED27Q6P2C8 311 aa15.33■□□□□ 0.04
DDR1-246ENST00000485023 TIFABQ6ZNK6 161 aa15.33■□□□□ 0.04
DDR1-246ENST00000485023 LANCL3Q6ZV70 420 aa15.33■□□□□ 0.04
DDR1-246ENST00000485023 RPS27LQ71UM5 84 aaKnown RBP15.33■□□□□ 0.04
DDR1-246ENST00000485023 RNF175Q8N4F7 328 aa15.33■□□□□ 0.04
DDR1-246ENST00000485023 MZB1Q8WU39 189 aa15.33■□□□□ 0.04
DDR1-246ENST00000485023 GAL3ST3Q96A11 431 aa15.33■□□□□ 0.04
DDR1-246ENST00000485023 MS4A6EQ96DS6 147 aa15.33■□□□□ 0.04
DDR1-246ENST00000485023 FAR2Q96K12 515 aa15.33■□□□□ 0.04
DDR1-246ENST00000485023 CDK15Q96Q40 435 aa15.33■□□□□ 0.04
DDR1-246ENST00000485023 MRPL57Q9BQC6 102 aaKnown RBP15.33■□□□□ 0.04
DDR1-246ENST00000485023 VN1R1Q9GZP7 353 aa15.33■□□□□ 0.04
DDR1-246ENST00000485023 IPPKQ9H8X2 491 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms