RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 ATAD3AQ9NVI7 634 aa25.1■■□□□ 1.61
SHOX2-204ENST00000483851 AP1M2Q9Y6Q5 423 aa25.1■■□□□ 1.61
SHOX2-204ENST00000483851 GABRR3A8MPY1 467 aa25.09■■□□□ 1.61
SHOX2-204ENST00000483851 DFNA5O60443 496 aa25.09■■□□□ 1.61
SHOX2-204ENST00000483851 NME1P15531 152 aaKnown RBP25.09■■□□□ 1.61
SHOX2-204ENST00000483851 HOXB9P17482 250 aaPredicted RBP25.09■■□□□ 1.61
SHOX2-204ENST00000483851 JUNDP17535 347 aa25.09■■□□□ 1.61
SHOX2-204ENST00000483851 HOXA6P31267 233 aa25.09■■□□□ 1.61
SHOX2-204ENST00000483851 WNT3P56703 355 aa25.09■■□□□ 1.61
SHOX2-204ENST00000483851 MED21Q13503 144 aa25.09■■□□□ 1.61
SHOX2-204ENST00000483851 PLCL1Q15111 1095 aa25.09■■□□□ 1.61
SHOX2-204ENST00000483851 HKDC1Q2TB90 917 aa25.09■■□□□ 1.61
SHOX2-204ENST00000483851 TNIP2Q8NFZ5 429 aa25.09■■□□□ 1.61
SHOX2-204ENST00000483851 WDR48Q8TAF3 677 aa25.09■■□□□ 1.61
SHOX2-204ENST00000483851 CREB3L4Q8TEY5 395 aa25.09■■□□□ 1.61
SHOX2-204ENST00000483851 C16orf78Q8WTQ4 265 aa25.09■■□□□ 1.61
SHOX2-204ENST00000483851 RGMAQ96B86 450 aa25.09■■□□□ 1.61
SHOX2-204ENST00000483851 BHLHE41Q9C0J9 482 aaPredicted RBP25.09■■□□□ 1.61
SHOX2-204ENST00000483851 SLC25A37Q9NYZ2 338 aa25.09■■□□□ 1.61
SHOX2-204ENST00000483851 ANKMY1Q9P2S6 941 aa25.09■■□□□ 1.61
SHOX2-204ENST00000483851 NIPSNAP3AQ9UFN0 247 aaPredicted RBP25.09■■□□□ 1.61
SHOX2-204ENST00000483851 BTNL2Q9UIR0 455 aa25.09■■□□□ 1.61
SHOX2-204ENST00000483851 PCDHB3Q9Y5E6 796 aa25.09■■□□□ 1.61
SHOX2-204ENST00000483851 SNX13Q9Y5W8 968 aa25.09■■□□□ 1.61
SHOX2-204ENST00000483851 ARHGEF17Q96PE2 2063 aaPredicted RBP25.09■■□□□ 1.61
SHOX2-204ENST00000483851 CROCCQ5TZA2 2017 aa25.09■■□□□ 1.61
SHOX2-204ENST00000483851 TLR4O00206 839 aa25.09■■□□□ 1.61
SHOX2-204ENST00000483851 BTN3A3O00478 584 aa25.09■■□□□ 1.61
SHOX2-204ENST00000483851 PLPP1O14494 284 aa25.09■■□□□ 1.61
SHOX2-204ENST00000483851 RFXANKO14593 260 aa25.09■■□□□ 1.61
SHOX2-204ENST00000483851 DENRO43583 198 aaKnown RBP25.09■■□□□ 1.61
SHOX2-204ENST00000483851 LCMT2O60294 686 aaKnown RBP25.09■■□□□ 1.61
SHOX2-204ENST00000483851 PDE7AQ13946 482 aa25.09■■□□□ 1.61
SHOX2-204ENST00000483851 GPR18Q14330 331 aa25.09■■□□□ 1.61
SHOX2-204ENST00000483851 TCEA2Q15560 299 aa25.09■■□□□ 1.61
SHOX2-204ENST00000483851 FAM71E1Q6IPT2 247 aa25.09■■□□□ 1.61
SHOX2-204ENST00000483851 PROSER1Q86XN7 944 aa25.09■■□□□ 1.61
SHOX2-204ENST00000483851 MSRB3Q8IXL7 192 aa25.09■■□□□ 1.61
SHOX2-204ENST00000483851 FBXL6Q8N531 539 aa25.09■■□□□ 1.61
SHOX2-204ENST00000483851 SLCO1B1Q9Y6L6 691 aa25.09■■□□□ 1.61
SHOX2-204ENST00000483851 CAPN5O15484 640 aaPredicted RBP25.08■■□□□ 1.61
SHOX2-204ENST00000483851 MAP3K13O43283 966 aa25.08■■□□□ 1.61
SHOX2-204ENST00000483851 WNT1P04628 370 aa25.08■■□□□ 1.61
SHOX2-204ENST00000483851 KLK1P06870 262 aa25.08■■□□□ 1.61
SHOX2-204ENST00000483851 PTPN6P29350 595 aa25.08■■□□□ 1.61
SHOX2-204ENST00000483851 CYP4F3Q08477 520 aa25.08■■□□□ 1.61
SHOX2-204ENST00000483851 ELOCQ15369 112 aa25.08■■□□□ 1.61
SHOX2-204ENST00000483851 ZIC1Q15915 447 aa25.08■■□□□ 1.61
SHOX2-204ENST00000483851 NAGSQ8N159 534 aa25.08■■□□□ 1.61
SHOX2-204ENST00000483851 SDR16C5Q8N3Y7 309 aa25.08■■□□□ 1.61
SHOX2-204ENST00000483851 CCDC115Q96NT0 180 aa25.08■■□□□ 1.61
SHOX2-204ENST00000483851 GMPR2Q9P2T1 348 aaKnown RBP25.08■■□□□ 1.61
SHOX2-204ENST00000483851 CNOT11Q9UKZ1 510 aaKnown RBP25.08■■□□□ 1.61
SHOX2-204ENST00000483851 AP4S1Q9Y587 144 aa25.08■■□□□ 1.61
SHOX2-204ENST00000483851 PCDHB14Q9Y5E9 798 aa25.08■■□□□ 1.61
SHOX2-204ENST00000483851 TRBV23OR9-2A0A075B6M9 112 aa25.07■■□□□ 1.6
SHOX2-204ENST00000483851 CCDC163A0A0D9SF12 145 aa25.07■■□□□ 1.6
SHOX2-204ENST00000483851 SAP18O00422 153 aaKnown RBP25.07■■□□□ 1.6
SHOX2-204ENST00000483851 NDUFS4O43181 175 aa25.07■■□□□ 1.6
SHOX2-204ENST00000483851 DDX5P17844 614 aaKnown RBP25.07■■□□□ 1.6
SHOX2-204ENST00000483851 TPP2P29144 1249 aaPredicted RBP25.07■■□□□ 1.6
SHOX2-204ENST00000483851 SLC7A1P30825 629 aa25.07■■□□□ 1.6
SHOX2-204ENST00000483851 BSGP35613 385 aa25.07■■□□□ 1.6
SHOX2-204ENST00000483851 FOLH1Q04609 750 aa25.07■■□□□ 1.6
SHOX2-204ENST00000483851 ZNF542PQ5EBM4 170 aa25.07■■□□□ 1.6
SHOX2-204ENST00000483851 KIAA1614Q5VZ46 1190 aa25.07■■□□□ 1.6
SHOX2-204ENST00000483851 MFSD9Q8NBP5 474 aa25.07■■□□□ 1.6
SHOX2-204ENST00000483851 CDC26Q8NHZ8 85 aa25.07■■□□□ 1.6
SHOX2-204ENST00000483851 DNASE2BQ8WZ79 361 aa25.07■■□□□ 1.6
SHOX2-204ENST00000483851 F2RL3Q96RI0 385 aa25.07■■□□□ 1.6
SHOX2-204ENST00000483851 LRRC61Q9BV99 259 aa25.07■■□□□ 1.6
SHOX2-204ENST00000483851 ZNF717Q9BY31 904 aaPredicted RBP25.07■■□□□ 1.6
SHOX2-204ENST00000483851 PDP2Q9P2J9 529 aa25.07■■□□□ 1.6
SHOX2-204ENST00000483851 KLK4Q9Y5K2 254 aa25.07■■□□□ 1.6
SHOX2-204ENST00000483851 RNASET2O00584 256 aaKnown RBP25.06■■□□□ 1.6
SHOX2-204ENST00000483851 TNFSF14O43557 240 aa25.06■■□□□ 1.6
SHOX2-204ENST00000483851 MTPNP58546 118 aa25.06■■□□□ 1.6
SHOX2-204ENST00000483851 CYP4F2P78329 520 aa25.06■■□□□ 1.6
SHOX2-204ENST00000483851 RELAQ04206 551 aa25.06■■□□□ 1.6
SHOX2-204ENST00000483851 ADPRMQ3LIE5 342 aa25.06■■□□□ 1.6
SHOX2-204ENST00000483851 CCNYL2Q5T2Q4 361 aa25.06■■□□□ 1.6
SHOX2-204ENST00000483851 NUDT13Q86X67 352 aa25.06■■□□□ 1.6
SHOX2-204ENST00000483851 NATD1Q8N6N6 113 aa25.06■■□□□ 1.6
SHOX2-204ENST00000483851 C1orf216Q8TAB5 229 aa25.06■■□□□ 1.6
SHOX2-204ENST00000483851 FLVCR1-AS1Q8TAF5 88 aa25.06■■□□□ 1.6
SHOX2-204ENST00000483851 SLC37A2Q8TED4 501 aa25.06■■□□□ 1.6
SHOX2-204ENST00000483851 PHF12Q96QT6 1004 aa25.06■■□□□ 1.6
SHOX2-204ENST00000483851 THUMPD3Q9BV44 507 aaKnown RBP25.06■■□□□ 1.6
SHOX2-204ENST00000483851 TM9SF3Q9HD45 589 aa25.06■■□□□ 1.6
SHOX2-204ENST00000483851 MAGEL2Q9UJ55 1249 aa25.06■■□□□ 1.6
SHOX2-204ENST00000483851 GMEB1Q9Y692 573 aa25.06■■□□□ 1.6
SHOX2-204ENST00000483851 TBX19O60806 448 aa25.06■■□□□ 1.6
SHOX2-204ENST00000483851 KLHL18O94889 574 aa25.06■■□□□ 1.6
SHOX2-204ENST00000483851 DCNP07585 359 aaKnown RBP25.06■■□□□ 1.6
SHOX2-204ENST00000483851 FURINP09958 794 aa25.06■■□□□ 1.6
SHOX2-204ENST00000483851 ZCCHC18P0CG32 403 aa25.06■■□□□ 1.6
SHOX2-204ENST00000483851 LAMP1P11279 417 aa25.06■■□□□ 1.6
SHOX2-204ENST00000483851 BCL6P41182 706 aa25.06■■□□□ 1.6
SHOX2-204ENST00000483851 TRA2BP62995 288 aaKnown RBP25.06■■□□□ 1.6
SHOX2-204ENST00000483851 PLIN5Q00G26 463 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms