RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 CYC1P08574 325 aa13.04□□□□□ -0.32
VARS-226ENST00000483275 NPPBP16860 134 aa13.04□□□□□ -0.32
VARS-226ENST00000483275 NME2P22392 152 aa13.04□□□□□ -0.32
VARS-226ENST00000483275 ITGA8P53708 1063 aa13.04□□□□□ -0.32
VARS-226ENST00000483275 RIPPLY3P57055 190 aa13.04□□□□□ -0.32
VARS-226ENST00000483275 TAS2R50P59544 299 aa13.04□□□□□ -0.32
VARS-226ENST00000483275 HYAL2Q12891 473 aa13.04□□□□□ -0.32
VARS-226ENST00000483275 CATSPEREQ5SY80 951 aa13.04□□□□□ -0.32
VARS-226ENST00000483275 SLC25A25Q6KCM7 469 aa13.04□□□□□ -0.32
VARS-226ENST00000483275 RPS19BP1Q86WX3 136 aaKnown RBP13.04□□□□□ -0.32
VARS-226ENST00000483275 MAIP1Q8WWC4 291 aa13.04□□□□□ -0.32
VARS-226ENST00000483275 TBC1D20Q96BZ9 403 aa13.04□□□□□ -0.32
VARS-226ENST00000483275 THAP11Q96EK4 314 aa13.04□□□□□ -0.32
VARS-226ENST00000483275 OR4K3Q96R72 315 aa13.04□□□□□ -0.32
VARS-226ENST00000483275 RHBGQ9H310 441 aa13.04□□□□□ -0.32
VARS-226ENST00000483275 PARVBQ9HBI1 364 aa13.04□□□□□ -0.32
VARS-226ENST00000483275 XAB2Q9HCS7 855 aaKnown RBP13.04□□□□□ -0.32
VARS-226ENST00000483275 IKZF3Q9UKT9 509 aa13.04□□□□□ -0.32
VARS-226ENST00000483275 PPT2Q9UMR5 302 aa13.04□□□□□ -0.32
VARS-226ENST00000483275 ASB1Q9Y576 335 aa13.04□□□□□ -0.32
VARS-226ENST00000483275 PCDHGB6Q9Y5F9 930 aa13.04□□□□□ -0.32
VARS-226ENST00000483275 CDC40O60508 579 aaKnown RBP eCLIP13.03□□□□□ -0.32
VARS-226ENST00000483275 GALR3O60755 368 aaPredicted RBP13.03□□□□□ -0.32
VARS-226ENST00000483275 GUCA1CO95843 209 aa13.03□□□□□ -0.32
VARS-226ENST00000483275 HRH2P25021 359 aa13.03□□□□□ -0.32
VARS-226ENST00000483275 GABRB3P28472 473 aa13.03□□□□□ -0.32
VARS-226ENST00000483275 MAGEA3P43357 314 aa13.03□□□□□ -0.32
VARS-226ENST00000483275 RAB8AP61006 207 aa13.03□□□□□ -0.32
VARS-226ENST00000483275 CRYMQ14894 314 aa13.03□□□□□ -0.32
VARS-226ENST00000483275 KRTCAP3Q53RY4 240 aa13.03□□□□□ -0.32
VARS-226ENST00000483275 LCTLQ6UWM7 567 aa13.03□□□□□ -0.32
VARS-226ENST00000483275 MEX3BQ6ZN04 569 aaKnown RBP13.03□□□□□ -0.32
VARS-226ENST00000483275 CDH24Q86UP0 819 aa13.03□□□□□ -0.32
VARS-226ENST00000483275 LRRC8AQ8IWT6 810 aa13.03□□□□□ -0.32
VARS-226ENST00000483275 MYO1HQ8N1T3 1032 aa13.03□□□□□ -0.32
VARS-226ENST00000483275 GHDCQ8N2G8 530 aa13.03□□□□□ -0.32
VARS-226ENST00000483275 MARVELD2Q8N4S9 558 aa13.03□□□□□ -0.32
VARS-226ENST00000483275 AFAP1L2Q8N4X5 818 aa13.03□□□□□ -0.32
VARS-226ENST00000483275 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.03□□□□□ -0.323e-8■■■■■ 66.7
VARS-226ENST00000483275 ELP5Q8TE02 316 aa13.03□□□□□ -0.32
VARS-226ENST00000483275 MAGOHBQ96A72 148 aaKnown RBP13.03□□□□□ -0.32
VARS-226ENST00000483275 SDCCAG3Q96C92 435 aa13.03□□□□□ -0.32
VARS-226ENST00000483275 SIGLEC10Q96LC7 697 aa13.03□□□□□ -0.32
VARS-226ENST00000483275 PTCHD1Q96NR3 888 aa13.03□□□□□ -0.32
VARS-226ENST00000483275 OR1F2PQ96R84 312 aa13.03□□□□□ -0.32
VARS-226ENST00000483275 FAM167BQ9BTA0 163 aa13.03□□□□□ -0.32
VARS-226ENST00000483275 PCBD2Q9H0N5 130 aa13.03□□□□□ -0.32
VARS-226ENST00000483275 GPAMQ9HCL2 828 aa13.03□□□□□ -0.32
VARS-226ENST00000483275 ARL15Q9NXU5 204 aa13.03□□□□□ -0.32
VARS-226ENST00000483275 SLC22A7Q9Y694 548 aa13.03□□□□□ -0.32
VARS-226ENST00000483275 AKAP6Q13023 2319 aa13.02□□□□□ -0.32
VARS-226ENST00000483275 HRNRQ86YZ3 2850 aaPredicted RBP13.02□□□□□ -0.33
VARS-226ENST00000483275 TFECO14948 347 aaPredicted RBP13.02□□□□□ -0.33
VARS-226ENST00000483275 KRT38O76015 456 aa13.02□□□□□ -0.33
VARS-226ENST00000483275 TSPAN12O95859 305 aa13.02□□□□□ -0.33
VARS-226ENST00000483275 C8GP07360 202 aa13.02□□□□□ -0.33
VARS-226ENST00000483275 CCDC175P0C221 793 aa13.02□□□□□ -0.33
VARS-226ENST00000483275 MLNP12872 115 aa13.02□□□□□ -0.33
VARS-226ENST00000483275 ALOX12P18054 663 aa13.02□□□□□ -0.33
VARS-226ENST00000483275 AGAP20933 346 aa13.02□□□□□ -0.33
VARS-226ENST00000483275 PPP2R1BP30154 601 aa13.02□□□□□ -0.33
VARS-226ENST00000483275 SSTR2P30874 369 aa13.02□□□□□ -0.33
VARS-226ENST00000483275 GRK3P35626 688 aa13.02□□□□□ -0.33
VARS-226ENST00000483275 RGS4P49798 205 aa13.02□□□□□ -0.33
VARS-226ENST00000483275 MEOX1P50221 254 aa13.02□□□□□ -0.33
VARS-226ENST00000483275 CCR8P51685 355 aa13.02□□□□□ -0.33
VARS-226ENST00000483275 GPR85P60893 370 aa13.02□□□□□ -0.33
VARS-226ENST00000483275 TLE4Q04727 773 aa13.02□□□□□ -0.33
VARS-226ENST00000483275 HERC3Q15034 1050 aa13.02□□□□□ -0.33
VARS-226ENST00000483275 PCGF5Q86SE9 256 aa13.02□□□□□ -0.33
VARS-226ENST00000483275 CD163Q86VB7 1156 aa13.02□□□□□ -0.33
VARS-226ENST00000483275 PALM2Q8IXS6 379 aa13.02□□□□□ -0.33
VARS-226ENST00000483275 RPRMLQ8N4K4 120 aa13.02□□□□□ -0.33
VARS-226ENST00000483275 FAM98AQ8NCA5 519 aaKnown RBP13.02□□□□□ -0.33
VARS-226ENST00000483275 C2CD4AQ8NCU7 369 aaPredicted RBP13.02□□□□□ -0.33
VARS-226ENST00000483275 MCUQ8NE86 351 aa13.02□□□□□ -0.33
VARS-226ENST00000483275 PLPP5Q8NEB5 264 aa13.02□□□□□ -0.33
VARS-226ENST00000483275 NEIL2Q969S2 332 aa13.02□□□□□ -0.33
VARS-226ENST00000483275 DMRTA2Q96SC8 542 aa13.02□□□□□ -0.33
VARS-226ENST00000483275 AICDAQ9GZX7 198 aa13.02□□□□□ -0.33
VARS-226ENST00000483275 KLHL31Q9H511 634 aa13.02□□□□□ -0.33
VARS-226ENST00000483275 NECTIN3Q9NQS3 549 aa13.02□□□□□ -0.33
VARS-226ENST00000483275 NEU2Q9Y3R4 380 aa13.02□□□□□ -0.33
VARS-226ENST00000483275 COMMD10Q9Y6G5 202 aa13.02□□□□□ -0.33
VARS-226ENST00000483275 A0A0G2JN53 185 aa13.01□□□□□ -0.33
VARS-226ENST00000483275 TRBV11-1A0A0K0K1C0 115 aa13.01□□□□□ -0.33
VARS-226ENST00000483275 A0A1B0GTH9 108 aa13.01□□□□□ -0.33
VARS-226ENST00000483275 SAGE2PA6NJ88 616 aa13.01□□□□□ -0.33
VARS-226ENST00000483275 FAM90A27PA6NNH2 459 aa13.01□□□□□ -0.33
VARS-226ENST00000483275 PDE9AO76083 593 aa13.01□□□□□ -0.33
VARS-226ENST00000483275 MLYCDO95822 493 aa13.01□□□□□ -0.33
VARS-226ENST00000483275 TPOP07202 933 aa13.01□□□□□ -0.33
VARS-226ENST00000483275 CYB561P49447 251 aa13.01□□□□□ -0.33
VARS-226ENST00000483275 MLF1P58340 268 aa13.01□□□□□ -0.33
VARS-226ENST00000483275 SP140Q13342 867 aa13.01□□□□□ -0.33
VARS-226ENST00000483275 MSS51Q4VC12 460 aa13.01□□□□□ -0.33
VARS-226ENST00000483275 HP1BP3Q5SSJ5 553 aaPredicted RBP13.01□□□□□ -0.33
VARS-226ENST00000483275 C16orf47Q6ZP98 133 aaPredicted RBP13.01□□□□□ -0.33
VARS-226ENST00000483275 CEP128Q6ZU80 1094 aa13.01□□□□□ -0.33
VARS-226ENST00000483275 HORMAD2Q8N7B1 307 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms