RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 RDH16O75452 317 aa17.4■□□□□ 0.38
SMIM4-204ENST00000482728 CLEC3AO75596 197 aa17.4■□□□□ 0.38
SMIM4-204ENST00000482728 BMP10O95393 424 aa17.4■□□□□ 0.38
SMIM4-204ENST00000482728 ACPPP15309 386 aa17.4■□□□□ 0.38
SMIM4-204ENST00000482728 CASP2P42575 452 aa17.4■□□□□ 0.38
SMIM4-204ENST00000482728 XCR1P46094 333 aa17.4■□□□□ 0.38
SMIM4-204ENST00000482728 PIK3CGP48736 1102 aa17.4■□□□□ 0.38
SMIM4-204ENST00000482728 PGDP52209 483 aa17.4■□□□□ 0.38
SMIM4-204ENST00000482728 RAB8AP61006 207 aa17.4■□□□□ 0.38
SMIM4-204ENST00000482728 SNRPNP63162 240 aaKnown RBP17.4■□□□□ 0.38
SMIM4-204ENST00000482728 NAA30Q147X3 362 aaPredicted RBP17.4■□□□□ 0.38
SMIM4-204ENST00000482728 PCBP2Q15366 365 aaKnown RBP eCLIP17.4■□□□□ 0.38
SMIM4-204ENST00000482728 MINDY4Q4G0A6 757 aa17.4■□□□□ 0.38
SMIM4-204ENST00000482728 TOR1AIP1Q5JTV8 583 aa17.4■□□□□ 0.38
SMIM4-204ENST00000482728 PDSS2Q86YH6 399 aa17.4■□□□□ 0.38
SMIM4-204ENST00000482728 ZC3H7AQ8IWR0 971 aaKnown RBP17.4■□□□□ 0.38
SMIM4-204ENST00000482728 PTGR2Q8N8N7 351 aaPredicted RBP17.4■□□□□ 0.38
SMIM4-204ENST00000482728 UTP15Q8TED0 518 aaKnown RBP17.4■□□□□ 0.38
SMIM4-204ENST00000482728 METTL21AQ8WXB1 218 aa17.4■□□□□ 0.38
SMIM4-204ENST00000482728 FAR2Q96K12 515 aa17.4■□□□□ 0.38
SMIM4-204ENST00000482728 SLC6A16Q9GZN6 736 aa17.4■□□□□ 0.38
SMIM4-204ENST00000482728 MRPL46Q9H2W6 279 aaKnown RBP17.4■□□□□ 0.38
SMIM4-204ENST00000482728 KLHL31Q9H511 634 aa17.4■□□□□ 0.38
SMIM4-204ENST00000482728 PPCSQ9HAB8 311 aa17.4■□□□□ 0.38
SMIM4-204ENST00000482728 COPG2Q9UBF2 871 aa17.4■□□□□ 0.38
SMIM4-204ENST00000482728 XPR1Q9UBH6 696 aa17.4■□□□□ 0.38
SMIM4-204ENST00000482728 ZNF490Q9ULM2 529 aaPredicted RBP17.4■□□□□ 0.38
SMIM4-204ENST00000482728 TP53TG5Q9Y2B4 290 aa17.4■□□□□ 0.38
SMIM4-204ENST00000482728 PCDHGA9Q9Y5G4 932 aaKnown RBP17.4■□□□□ 0.38
SMIM4-204ENST00000482728 HEMK1Q9Y5R4 338 aaPredicted RBP17.4■□□□□ 0.38
SMIM4-204ENST00000482728 FASNP49327 2511 aaKnown RBP17.4■□□□□ 0.38
SMIM4-204ENST00000482728 B8ZZF3 427 aa17.39■□□□□ 0.37
SMIM4-204ENST00000482728 SOCS6O14544 535 aa17.39■□□□□ 0.37
SMIM4-204ENST00000482728 PCDH17O14917 1159 aa17.39■□□□□ 0.37
SMIM4-204ENST00000482728 KLHL41O60662 606 aa17.39■□□□□ 0.37
SMIM4-204ENST00000482728 PRAMEF4O60810 478 aa17.39■□□□□ 0.37
SMIM4-204ENST00000482728 WFS1O76024 890 aa17.39■□□□□ 0.37
SMIM4-204ENST00000482728 EPORP19235 508 aa17.39■□□□□ 0.37
SMIM4-204ENST00000482728 IL10P22301 178 aa17.39■□□□□ 0.37
SMIM4-204ENST00000482728 VSNL1P62760 191 aa17.39■□□□□ 0.37
SMIM4-204ENST00000482728 TUBB8Q3ZCM7 444 aa17.39■□□□□ 0.37
SMIM4-204ENST00000482728 PRAMEF9Q5VWM5 478 aa17.39■□□□□ 0.37
SMIM4-204ENST00000482728 FAAH2Q6GMR7 532 aa17.39■□□□□ 0.37
SMIM4-204ENST00000482728 METTL2BQ6P1Q9 378 aaKnown RBP17.39■□□□□ 0.37
SMIM4-204ENST00000482728 MED27Q6P2C8 311 aa17.39■□□□□ 0.37
SMIM4-204ENST00000482728 ASB18Q6ZVZ8 466 aa17.39■□□□□ 0.37
SMIM4-204ENST00000482728 PTRH1Q86Y79 214 aaKnown RBP17.39■□□□□ 0.37
SMIM4-204ENST00000482728 MYLK4Q86YV6 388 aaPredicted RBP17.39■□□□□ 0.37
SMIM4-204ENST00000482728 ACMSDQ8TDX5 336 aa17.39■□□□□ 0.37
SMIM4-204ENST00000482728 PHF21BQ96EK2 531 aa17.39■□□□□ 0.37
SMIM4-204ENST00000482728 ACTR8Q9H981 624 aa17.39■□□□□ 0.37
SMIM4-204ENST00000482728 CLK4Q9HAZ1 481 aaKnown RBP17.39■□□□□ 0.37
SMIM4-204ENST00000482728 GPR83Q9NYM4 423 aa17.39■□□□□ 0.37
SMIM4-204ENST00000482728 CNTRLQ7Z7A1 2325 aa17.39■□□□□ 0.37
SMIM4-204ENST00000482728 ZNF462Q96JM2 2506 aa17.39■□□□□ 0.37
SMIM4-204ENST00000482728 LRIT2A6NDA9 550 aa17.38■□□□□ 0.37
SMIM4-204ENST00000482728 GOLGA8RI6L899 631 aa17.38■□□□□ 0.37
SMIM4-204ENST00000482728 CHST10O43529 356 aa17.38■□□□□ 0.37
SMIM4-204ENST00000482728 JRKO75564 520 aa17.38■□□□□ 0.37
SMIM4-204ENST00000482728 SIX3O95343 332 aaPredicted RBP17.38■□□□□ 0.37
SMIM4-204ENST00000482728 SHBGP04278 402 aa17.38■□□□□ 0.37
SMIM4-204ENST00000482728 SLCO1A2P46721 670 aa17.38■□□□□ 0.37
SMIM4-204ENST00000482728 PCDH1Q08174 1060 aa17.38■□□□□ 0.37
SMIM4-204ENST00000482728 TGM3Q08188 693 aa17.38■□□□□ 0.37
SMIM4-204ENST00000482728 HYAL2Q12891 473 aa17.38■□□□□ 0.37
SMIM4-204ENST00000482728 AIMP2Q13155 320 aaKnown RBP17.38■□□□□ 0.37
SMIM4-204ENST00000482728 GTF2H2Q13888 395 aa17.38■□□□□ 0.37
SMIM4-204ENST00000482728 IRAK1BP1Q5VVH5 260 aa17.38■□□□□ 0.37
SMIM4-204ENST00000482728 GTF2H2CQ6P1K8 395 aa17.38■□□□□ 0.37
SMIM4-204ENST00000482728 ZNF605Q86T29 641 aa17.38■□□□□ 0.37
SMIM4-204ENST00000482728 LCA5Q86VQ0 697 aa17.38■□□□□ 0.37
SMIM4-204ENST00000482728 GALNT16Q8N428 558 aa17.38■□□□□ 0.37
SMIM4-204ENST00000482728 FDCSPQ8NFU4 85 aa17.38■□□□□ 0.37
SMIM4-204ENST00000482728 OR11G2Q8NGC1 345 aa17.38■□□□□ 0.37
SMIM4-204ENST00000482728 ATP6V1E2Q96A05 226 aa17.38■□□□□ 0.37
SMIM4-204ENST00000482728 PEX11GQ96HA9 241 aa17.38■□□□□ 0.37
SMIM4-204ENST00000482728 RHBGQ9H310 441 aa17.38■□□□□ 0.37
SMIM4-204ENST00000482728 IPPKQ9H8X2 491 aa17.38■□□□□ 0.37
SMIM4-204ENST00000482728 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.38■□□□□ 0.37
SMIM4-204ENST00000482728 V9GYY5 206 aaPredicted RBP17.38■□□□□ 0.37
SMIM4-204ENST00000482728 A0A088AWK7 358 aa17.37■□□□□ 0.37
SMIM4-204ENST00000482728 LRRC14BA6NHZ5 514 aa17.37■□□□□ 0.37
SMIM4-204ENST00000482728 SMIM23A6NLE4 172 aa17.37■□□□□ 0.37
SMIM4-204ENST00000482728 STX16-NPEPL1H3BU86 382 aa17.37■□□□□ 0.37
SMIM4-204ENST00000482728 STX16O14662 325 aa17.37■□□□□ 0.37
SMIM4-204ENST00000482728 ERI3O43414 337 aaKnown RBP17.37■□□□□ 0.37
SMIM4-204ENST00000482728 ALOX12BO75342 701 aa17.37■□□□□ 0.37
SMIM4-204ENST00000482728 CEACAM4O75871 244 aa17.37■□□□□ 0.37
SMIM4-204ENST00000482728 B3GALT4O96024 378 aa17.37■□□□□ 0.37
SMIM4-204ENST00000482728 SMIM10L1P0DMW3 83 aa17.37■□□□□ 0.37
SMIM4-204ENST00000482728 PYGBP11216 843 aa17.37■□□□□ 0.37
SMIM4-204ENST00000482728 PCNAP12004 261 aa17.37■□□□□ 0.37
SMIM4-204ENST00000482728 KRT15P19012 456 aa17.37■□□□□ 0.37
SMIM4-204ENST00000482728 CD22P20273 847 aa17.37■□□□□ 0.37
SMIM4-204ENST00000482728 TAC1P20366 129 aa17.37■□□□□ 0.37
SMIM4-204ENST00000482728 ZNF10P21506 573 aaPredicted RBP17.37■□□□□ 0.37
SMIM4-204ENST00000482728 EEF1DP29692 281 aaKnown RBP17.37■□□□□ 0.37
SMIM4-204ENST00000482728 HSD17B3P37058 310 aa17.37■□□□□ 0.37
SMIM4-204ENST00000482728 ARL1P40616 181 aaPredicted RBP17.37■□□□□ 0.37
SMIM4-204ENST00000482728 OLR1P78380 273 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms