RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 PLXNA3P51805 1871 aa13.78□□□□□ -0.2
COL9A2-207ENST00000482722 A0A075B6Q4 140 aa13.77□□□□□ -0.2
COL9A2-207ENST00000482722 TMEM189-UBE2V1I3L0A0 370 aa13.77□□□□□ -0.2
COL9A2-207ENST00000482722 CDK2AP1O14519 115 aa13.77□□□□□ -0.2
COL9A2-207ENST00000482722 PRAMEF1O95521 474 aa13.77□□□□□ -0.2
COL9A2-207ENST00000482722 GGT2P36268 569 aa13.77□□□□□ -0.2
COL9A2-207ENST00000482722 PTGER3P43115 390 aa13.77□□□□□ -0.2
COL9A2-207ENST00000482722 PLD1Q13393 1074 aa13.77□□□□□ -0.2
COL9A2-207ENST00000482722 PDE12Q6L8Q7 609 aaKnown RBP13.77□□□□□ -0.2
COL9A2-207ENST00000482722 SERPINA9Q86WD7 417 aa13.77□□□□□ -0.2
COL9A2-207ENST00000482722 LAX1Q8IWV1 398 aa13.77□□□□□ -0.2
COL9A2-207ENST00000482722 ZFAND1Q8TCF1 268 aa13.77□□□□□ -0.2
COL9A2-207ENST00000482722 VPS35Q96QK1 796 aa13.77□□□□□ -0.2
COL9A2-207ENST00000482722 BARHL1Q9BZE3 327 aa13.77□□□□□ -0.2
COL9A2-207ENST00000482722 ABCB8Q9NUT2 735 aa13.77□□□□□ -0.2
COL9A2-207ENST00000482722 KCNN3Q9UGI6 736 aa13.77□□□□□ -0.2
COL9A2-207ENST00000482722 CCDC182A6NF36 153 aa13.77□□□□□ -0.21
COL9A2-207ENST00000482722 POLR1CO15160 346 aaPredicted RBP13.77□□□□□ -0.21
COL9A2-207ENST00000482722 BNIP3LO60238 219 aa13.77□□□□□ -0.21
COL9A2-207ENST00000482722 GPX5O75715 221 aa13.77□□□□□ -0.21
COL9A2-207ENST00000482722 SLC25A14O95258 325 aaPredicted RBP13.77□□□□□ -0.21
COL9A2-207ENST00000482722 C9P02748 559 aa13.77□□□□□ -0.21
COL9A2-207ENST00000482722 CSF2P04141 144 aa13.77□□□□□ -0.21
COL9A2-207ENST00000482722 ADRA2AP08913 450 aa13.77□□□□□ -0.21
COL9A2-207ENST00000482722 CD72P21854 359 aa13.77□□□□□ -0.21
COL9A2-207ENST00000482722 FAPQ12884 760 aa13.77□□□□□ -0.21
COL9A2-207ENST00000482722 MED22Q15528 200 aa13.77□□□□□ -0.21
COL9A2-207ENST00000482722 TAF12Q16514 161 aa13.77□□□□□ -0.21
COL9A2-207ENST00000482722 PTCHD3Q3KNS1 767 aa13.77□□□□□ -0.21
COL9A2-207ENST00000482722 USP39Q53GS9 565 aaKnown RBP13.77□□□□□ -0.21
COL9A2-207ENST00000482722 MLIPQ5VWP3 458 aa13.77□□□□□ -0.21
COL9A2-207ENST00000482722 OR4F3Q6IEY1 312 aa13.77□□□□□ -0.21
COL9A2-207ENST00000482722 TMPRSS11AQ6ZMR5 421 aa13.77□□□□□ -0.21
COL9A2-207ENST00000482722 ATCAYQ86WG3 371 aa13.77□□□□□ -0.21
COL9A2-207ENST00000482722 RNF175Q8N4F7 328 aa13.77□□□□□ -0.21
COL9A2-207ENST00000482722 CDC26Q8NHZ8 85 aa13.77□□□□□ -0.21
COL9A2-207ENST00000482722 POP5Q969H6 163 aaKnown RBP13.77□□□□□ -0.21
COL9A2-207ENST00000482722 CNPPD1Q9BV87 410 aa13.77□□□□□ -0.21
COL9A2-207ENST00000482722 ASB8Q9H765 288 aa13.77□□□□□ -0.21
COL9A2-207ENST00000482722 EFCAB10A6NFE3 127 aa13.77□□□□□ -0.21
COL9A2-207ENST00000482722 RFXANKO14593 260 aa13.77□□□□□ -0.21
COL9A2-207ENST00000482722 AKR7A2O43488 359 aa13.77□□□□□ -0.21
COL9A2-207ENST00000482722 STC2O76061 302 aa13.77□□□□□ -0.21
COL9A2-207ENST00000482722 GJA1P17302 382 aa13.77□□□□□ -0.21
COL9A2-207ENST00000482722 HOXB9P17482 250 aaPredicted RBP13.77□□□□□ -0.21
COL9A2-207ENST00000482722 MYL9P24844 172 aa13.77□□□□□ -0.21
COL9A2-207ENST00000482722 RPS19P39019 145 aaKnown RBP13.77□□□□□ -0.21
COL9A2-207ENST00000482722 TGM4P49221 684 aa13.77□□□□□ -0.21
COL9A2-207ENST00000482722 RPS14P62263 151 aaKnown RBP13.77□□□□□ -0.21
COL9A2-207ENST00000482722 SNRPD2P62316 118 aaKnown RBP13.77□□□□□ -0.21
COL9A2-207ENST00000482722 ZXDBP98169 803 aa13.77□□□□□ -0.21
COL9A2-207ENST00000482722 MAD2L1Q13257 205 aaPredicted RBP13.77□□□□□ -0.21
COL9A2-207ENST00000482722 ARHGEF6Q15052 776 aa13.77□□□□□ -0.21
COL9A2-207ENST00000482722 PAMR1Q6UXH9 720 aa13.77□□□□□ -0.21
COL9A2-207ENST00000482722 GLRX5Q86SX6 157 aa13.77□□□□□ -0.21
COL9A2-207ENST00000482722 ADAMTSL2Q86TH1 951 aa13.77□□□□□ -0.21
COL9A2-207ENST00000482722 UBE2J2Q8N2K1 259 aa13.77□□□□□ -0.21
COL9A2-207ENST00000482722 OR4M1Q8NGD0 313 aa13.77□□□□□ -0.21
COL9A2-207ENST00000482722 SRRQ9GZT4 340 aa13.77□□□□□ -0.21
COL9A2-207ENST00000482722 C3orf14Q9HBI5 128 aa13.77□□□□□ -0.21
COL9A2-207ENST00000482722 ZNF226Q9NYT6 803 aa13.77□□□□□ -0.21
COL9A2-207ENST00000482722 PPT2Q9UMR5 302 aa13.77□□□□□ -0.21
COL9A2-207ENST00000482722 PRSS21Q9Y6M0 314 aa13.77□□□□□ -0.21
COL9A2-207ENST00000482722 B4DXG7 233 aa13.76□□□□□ -0.21
COL9A2-207ENST00000482722 H3BM21 787 aa13.76□□□□□ -0.21
COL9A2-207ENST00000482722 F11P03951 625 aa13.76□□□□□ -0.21
COL9A2-207ENST00000482722 M6PRP20645 277 aa13.76□□□□□ -0.21
COL9A2-207ENST00000482722 IL12RB1P42701 662 aa13.76□□□□□ -0.21
COL9A2-207ENST00000482722 ITGA1P56199 1179 aa13.76□□□□□ -0.21
COL9A2-207ENST00000482722 OLR1P78380 273 aa13.76□□□□□ -0.21
COL9A2-207ENST00000482722 ARHGEF7Q14155 803 aa13.76□□□□□ -0.21
COL9A2-207ENST00000482722 HECTD3Q5T447 861 aa13.76□□□□□ -0.21
COL9A2-207ENST00000482722 ZNF648Q5T619 568 aaPredicted RBP13.76□□□□□ -0.21
COL9A2-207ENST00000482722 OTOP2Q7RTS6 562 aa13.76□□□□□ -0.21
COL9A2-207ENST00000482722 ZNF605Q86T29 641 aa13.76□□□□□ -0.21
COL9A2-207ENST00000482722 YIPF7Q8N8F6 280 aa13.76□□□□□ -0.21
COL9A2-207ENST00000482722 VANGL1Q8TAA9 524 aaPredicted RBP13.76□□□□□ -0.21
COL9A2-207ENST00000482722 SKA2Q8WVK7 121 aaPredicted RBP13.76□□□□□ -0.21
COL9A2-207ENST00000482722 MGLLQ99685 303 aa13.76□□□□□ -0.21
COL9A2-207ENST00000482722 ACPTQ9BZG2 426 aa13.76□□□□□ -0.21
COL9A2-207ENST00000482722 SLC22A4Q9H015 551 aa13.76□□□□□ -0.21
COL9A2-207ENST00000482722 NARFLQ9H6Q4 476 aa13.76□□□□□ -0.21
COL9A2-207ENST00000482722 PRM3Q9NNZ6 103 aa13.76□□□□□ -0.21
COL9A2-207ENST00000482722 EXOSC4Q9NPD3 245 aaKnown RBP13.76□□□□□ -0.21
COL9A2-207ENST00000482722 TMEM39AQ9NV64 488 aa13.76□□□□□ -0.21
COL9A2-207ENST00000482722 TMEM184CQ9NVA4 438 aa13.76□□□□□ -0.21
COL9A2-207ENST00000482722 MAT2BQ9NZL9 334 aa13.76□□□□□ -0.21
COL9A2-207ENST00000482722 SNX7Q9UNH6 387 aa13.76□□□□□ -0.21
COL9A2-207ENST00000482722 DHRS7Q9Y394 339 aa13.76□□□□□ -0.21
COL9A2-207ENST00000482722 A0A1B0GVM2 712 aa13.76□□□□□ -0.21
COL9A2-207ENST00000482722 MANBAO00462 879 aa13.76□□□□□ -0.21
COL9A2-207ENST00000482722 NRG2O14511 850 aaPredicted RBP13.76□□□□□ -0.21
COL9A2-207ENST00000482722 KDELR2P33947 212 aa13.76□□□□□ -0.21
COL9A2-207ENST00000482722 PRIM2P49643 509 aa13.76□□□□□ -0.21
COL9A2-207ENST00000482722 HOXC5Q00444 222 aa13.76□□□□□ -0.21
COL9A2-207ENST00000482722 CACNG1Q06432 222 aa13.76□□□□□ -0.21
COL9A2-207ENST00000482722 TARDBPQ13148 414 aaKnown RBP eCLIP13.76□□□□□ -0.21
COL9A2-207ENST00000482722 SSX1Q16384 188 aa13.76□□□□□ -0.21
COL9A2-207ENST00000482722 SLC39A5Q6ZMH5 540 aa13.76□□□□□ -0.21
COL9A2-207ENST00000482722 DPY19L3Q6ZPD9 716 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms