RNA–Protein interactions for RNA: ENST00000482000.1

PRKCB-206, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-206ENST00000482000 LYSMD1Q96S90 227 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 RIOK2Q9BVS4 552 aaKnown RBP4.84□□□□□ -1.63
PRKCB-206ENST00000482000 TDRD1Q9BXT4 1180 aaKnown RBP4.84□□□□□ -1.63
PRKCB-206ENST00000482000 KRTAP4-11Q9BYQ6 195 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 B3GNT4Q9C0J1 378 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 BRD8Q9H0E9 1235 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 RBM22Q9NW64 420 aaKnown RBP eCLIP4.84□□□□□ -1.63
PRKCB-206ENST00000482000 IFNKQ9P0W0 207 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 LRFN1Q9P244 771 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 SEMA5BQ9P283 1151 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 PDP2Q9P2J9 529 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 GRHPRQ9UBQ7 328 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 TBC1D29Q9UFV1 150 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 AMACRQ9UHK6 382 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 PTPN13Q12923 2485 aa4.84□□□□□ -1.64
PRKCB-206ENST00000482000 SEC16AO15027 2179 aa4.84□□□□□ -1.64
PRKCB-206ENST00000482000 FER1L5A0AVI2 2057 aa4.84□□□□□ -1.64
PRKCB-206ENST00000482000 CCDC88CQ9P219 2028 aa4.84□□□□□ -1.64
PRKCB-206ENST00000482000 UBR5O95071 2799 aaPredicted RBP4.83□□□□□ -1.64
PRKCB-206ENST00000482000 ANKRD66B4E2M5 251 aa4.83□□□□□ -1.64
PRKCB-206ENST00000482000 J3QKU1 62 aa4.83□□□□□ -1.64
PRKCB-206ENST00000482000 KCNK1O00180 336 aa4.83□□□□□ -1.64
PRKCB-206ENST00000482000 PRAMEF2O60811 474 aa4.83□□□□□ -1.64
PRKCB-206ENST00000482000 ATP1A1P05023 1023 aaKnown RBP4.83□□□□□ -1.64
PRKCB-206ENST00000482000 THRAP10827 490 aa4.83□□□□□ -1.64
PRKCB-206ENST00000482000 ZNF37AP17032 561 aaPredicted RBP4.83□□□□□ -1.64
PRKCB-206ENST00000482000 ITGB6P18564 788 aa4.83□□□□□ -1.64
PRKCB-206ENST00000482000 KDELR1P24390 212 aa4.83□□□□□ -1.64
PRKCB-206ENST00000482000 CD82P27701 267 aa4.83□□□□□ -1.64
PRKCB-206ENST00000482000 CASP14P31944 242 aa4.83□□□□□ -1.64
PRKCB-206ENST00000482000 MAN1A1P33908 653 aa4.83□□□□□ -1.64
PRKCB-206ENST00000482000 SSR1P43307 286 aaKnown RBP4.83□□□□□ -1.64
PRKCB-206ENST00000482000 GSTM5P46439 218 aa4.83□□□□□ -1.64
PRKCB-206ENST00000482000 POLE2P56282 527 aa4.83□□□□□ -1.64
PRKCB-206ENST00000482000 RPL26P61254 145 aaKnown RBP4.83□□□□□ -1.64
PRKCB-206ENST00000482000 IFI35P80217 286 aaPredicted RBP4.83□□□□□ -1.64
PRKCB-206ENST00000482000 PPIDQ08752 370 aaKnown RBP4.83□□□□□ -1.64
PRKCB-206ENST00000482000 TRA2AQ13595 282 aaKnown RBP eCLIP4.83□□□□□ -1.64
PRKCB-206ENST00000482000 GALNT3Q14435 633 aa4.83□□□□□ -1.64
PRKCB-206ENST00000482000 PDK2Q15119 407 aa4.83□□□□□ -1.64
PRKCB-206ENST00000482000 SLC18A3Q16572 532 aa4.83□□□□□ -1.64
PRKCB-206ENST00000482000 HADHQ16836 314 aaKnown RBP4.83□□□□□ -1.64
PRKCB-206ENST00000482000 MANEAQ5SRI9 462 aa4.83□□□□□ -1.64
PRKCB-206ENST00000482000 LIN54Q6MZP7 749 aa4.83□□□□□ -1.64
PRKCB-206ENST00000482000 PRIMA1Q86XR5 153 aa4.83□□□□□ -1.64
PRKCB-206ENST00000482000 GALNT13Q8IUC8 556 aa4.83□□□□□ -1.64
PRKCB-206ENST00000482000 P3H2Q8IVL5 708 aa4.83□□□□□ -1.64
PRKCB-206ENST00000482000 PLD5Q8N7P1 536 aa4.83□□□□□ -1.64
PRKCB-206ENST00000482000 KCTD6Q8NC69 237 aa4.83□□□□□ -1.64
PRKCB-206ENST00000482000 LPCAT1Q8NF37 534 aa4.83□□□□□ -1.64
PRKCB-206ENST00000482000 WDR60Q8WVS4 1066 aa4.83□□□□□ -1.64
PRKCB-206ENST00000482000 CTNNBL1Q8WYA6 563 aaPredicted RBP4.83□□□□□ -1.64
PRKCB-206ENST00000482000 ART4Q93070 314 aa4.83□□□□□ -1.64
PRKCB-206ENST00000482000 TADA1Q96BN2 335 aa4.83□□□□□ -1.64
PRKCB-206ENST00000482000 SGF29Q96ES7 293 aa4.83□□□□□ -1.64
PRKCB-206ENST00000482000 OLFM3Q96PB7 478 aa4.83□□□□□ -1.64
PRKCB-206ENST00000482000 RNF157Q96PX1 679 aa4.83□□□□□ -1.64
PRKCB-206ENST00000482000 TRIB3Q96RU7 358 aa4.83□□□□□ -1.64
PRKCB-206ENST00000482000 SPRY4Q9C004 299 aa4.83□□□□□ -1.64
PRKCB-206ENST00000482000 PCDH9Q9HC56 1237 aa4.83□□□□□ -1.64
PRKCB-206ENST00000482000 STARD5Q9NSY2 213 aa4.83□□□□□ -1.64
PRKCB-206ENST00000482000 SH3BP4Q9P0V3 963 aa4.83□□□□□ -1.64
PRKCB-206ENST00000482000 VPS18Q9P253 973 aa4.83□□□□□ -1.64
PRKCB-206ENST00000482000 UVRAGQ9P2Y5 699 aa4.83□□□□□ -1.64
PRKCB-206ENST00000482000 DNPEPQ9ULA0 475 aa4.83□□□□□ -1.64
PRKCB-206ENST00000482000 RPL26L1Q9UNX3 145 aaKnown RBP4.83□□□□□ -1.64
PRKCB-206ENST00000482000 TTLL3Q9Y4R7 772 aa4.83□□□□□ -1.64
PRKCB-206ENST00000482000 COX11Q9Y6N1 276 aa4.83□□□□□ -1.64
PRKCB-206ENST00000482000 TNRC6AQ8NDV7 1962 aaKnown RBP4.83□□□□□ -1.64
PRKCB-206ENST00000482000 C1orf232A0A0U1RR37 186 aa4.82□□□□□ -1.64
PRKCB-206ENST00000482000 ZNF487B1APH4 448 aa4.82□□□□□ -1.64
PRKCB-206ENST00000482000 B4E171 279 aa4.82□□□□□ -1.64
PRKCB-206ENST00000482000 STMND1H3BQB6 276 aa4.82□□□□□ -1.64
PRKCB-206ENST00000482000 FCHO1O14526 889 aa4.82□□□□□ -1.64
PRKCB-206ENST00000482000 MTA2O94776 668 aa4.82□□□□□ -1.64
PRKCB-206ENST00000482000 JCHAINP01591 159 aa4.82□□□□□ -1.64
PRKCB-206ENST00000482000 PYGLP06737 847 aa4.82□□□□□ -1.64
PRKCB-206ENST00000482000 KRT7P08729 469 aa4.82□□□□□ -1.64
PRKCB-206ENST00000482000 H2AFZP0C0S5 128 aa4.82□□□□□ -1.64
PRKCB-206ENST00000482000 PIRTP0C851 137 aa4.82□□□□□ -1.64
PRKCB-206ENST00000482000 NHLRC4P0CG21 123 aaPredicted RBP4.82□□□□□ -1.64
PRKCB-206ENST00000482000 ACP5P13686 325 aa4.82□□□□□ -1.64
PRKCB-206ENST00000482000 F3P13726 295 aa4.82□□□□□ -1.64
PRKCB-206ENST00000482000 LIFP15018 202 aa4.82□□□□□ -1.64
PRKCB-206ENST00000482000 ZNF8P17098 575 aaPredicted RBP4.82□□□□□ -1.64
PRKCB-206ENST00000482000 GALNSP34059 522 aa4.82□□□□□ -1.64
PRKCB-206ENST00000482000 UGT1A3P35503 534 aa4.82□□□□□ -1.64
PRKCB-206ENST00000482000 TSPAN7P41732 249 aa4.82□□□□□ -1.64
PRKCB-206ENST00000482000 CD86P42081 329 aa4.82□□□□□ -1.64
PRKCB-206ENST00000482000 PNLIPRP1P54315 467 aa4.82□□□□□ -1.64
PRKCB-206ENST00000482000 DCDC1P59894 354 aa4.82□□□□□ -1.64
PRKCB-206ENST00000482000 TXNL4AP83876 142 aaKnown RBP4.82□□□□□ -1.64
PRKCB-206ENST00000482000 PEX6Q13608 980 aa4.82□□□□□ -1.64
PRKCB-206ENST00000482000 MESDQ14696 234 aa4.82□□□□□ -1.64
PRKCB-206ENST00000482000 C4orf46Q504U0 113 aa4.82□□□□□ -1.64
PRKCB-206ENST00000482000 ACSM6Q6P461 480 aa4.82□□□□□ -1.64
PRKCB-206ENST00000482000 TMEM71Q6P5X7 295 aa4.82□□□□□ -1.64
PRKCB-206ENST00000482000 IYDQ6PHW0 289 aa4.82□□□□□ -1.64
PRKCB-206ENST00000482000 WDR74Q6RFH5 385 aaPredicted RBP4.82□□□□□ -1.64
PRKCB-206ENST00000482000 H2AFVQ71UI9 128 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms