RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 HMGB1P1B2RPK0 211 aaPredicted RBP11.63□□□□□ -0.55
TRA2B-212ENST00000480461 DYNC1I1O14576 645 aa11.63□□□□□ -0.55
TRA2B-212ENST00000480461 FFAR3O14843 346 aa11.63□□□□□ -0.55
TRA2B-212ENST00000480461 GPR42O15529 346 aa11.63□□□□□ -0.55
TRA2B-212ENST00000480461 ATP8B1O43520 1251 aa11.63□□□□□ -0.55
TRA2B-212ENST00000480461 UGDHO60701 494 aa11.63□□□□□ -0.55
TRA2B-212ENST00000480461 OTCP00480 354 aa11.63□□□□□ -0.55
TRA2B-212ENST00000480461 CAPN1P07384 714 aa11.63□□□□□ -0.55
TRA2B-212ENST00000480461 CXCR2P25025 360 aa11.63□□□□□ -0.55
TRA2B-212ENST00000480461 SERPINB3P29508 390 aa11.63□□□□□ -0.55
TRA2B-212ENST00000480461 HNRNPH1P31943 449 aaKnown RBP11.63□□□□□ -0.55
TRA2B-212ENST00000480461 HPDP32754 393 aaPredicted RBP11.63□□□□□ -0.55
TRA2B-212ENST00000480461 GRK3P35626 688 aa11.63□□□□□ -0.55
TRA2B-212ENST00000480461 HNF4AP41235 474 aa11.63□□□□□ -0.55
TRA2B-212ENST00000480461 LCP2Q13094 533 aa11.63□□□□□ -0.55
TRA2B-212ENST00000480461 LAPTM5Q13571 262 aa11.63□□□□□ -0.55
TRA2B-212ENST00000480461 RBBP7Q16576 425 aa11.63□□□□□ -0.55
TRA2B-212ENST00000480461 ARL13AQ5H913 290 aaPredicted RBP11.63□□□□□ -0.55
TRA2B-212ENST00000480461 TCTE1Q5JU00 501 aa11.63□□□□□ -0.55
TRA2B-212ENST00000480461 C1orf189Q5VU69 101 aa11.63□□□□□ -0.55
TRA2B-212ENST00000480461 RHBDD2Q6NTF9 364 aa11.63□□□□□ -0.55
TRA2B-212ENST00000480461 TMEM214Q6NUQ4 689 aaKnown RBP11.63□□□□□ -0.55
TRA2B-212ENST00000480461 MED27Q6P2C8 311 aa11.63□□□□□ -0.55
TRA2B-212ENST00000480461 ZNF517Q6ZMY9 492 aaPredicted RBP11.63□□□□□ -0.55
TRA2B-212ENST00000480461 TMEM126BQ8IUX1 230 aa11.63□□□□□ -0.55
TRA2B-212ENST00000480461 GPR135Q8IZ08 494 aa11.63□□□□□ -0.55
TRA2B-212ENST00000480461 KRT78Q8N1N4 520 aa11.63□□□□□ -0.55
TRA2B-212ENST00000480461 HUS1BQ8NHY5 278 aa11.63□□□□□ -0.55
TRA2B-212ENST00000480461 NT5CQ8TCD5 201 aa11.63□□□□□ -0.55
TRA2B-212ENST00000480461 AGAP11Q8TF27 550 aa11.63□□□□□ -0.55
TRA2B-212ENST00000480461 N4BP2L2Q92802 583 aaPredicted RBP11.63□□□□□ -0.55
TRA2B-212ENST00000480461 CNDP1Q96KN2 507 aa11.63□□□□□ -0.55
TRA2B-212ENST00000480461 TEFMQ96QE5 360 aaKnown RBP11.63□□□□□ -0.55
TRA2B-212ENST00000480461 SLC6A16Q9GZN6 736 aa11.63□□□□□ -0.55
TRA2B-212ENST00000480461 ACTR5Q9H9F9 607 aaPredicted RBP11.63□□□□□ -0.55
TRA2B-212ENST00000480461 CUTCQ9NTM9 273 aa11.63□□□□□ -0.55
TRA2B-212ENST00000480461 TIMM22Q9Y584 194 aa11.63□□□□□ -0.55
TRA2B-212ENST00000480461 LRRK2Q5S007 2527 aa11.63□□□□□ -0.55
TRA2B-212ENST00000480461 TLN1Q9Y490 2541 aaKnown RBP11.63□□□□□ -0.55
TRA2B-212ENST00000480461 USP9XQ93008 2570 aaPredicted RBP11.62□□□□□ -0.55
TRA2B-212ENST00000480461 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.62□□□□□ -0.55
TRA2B-212ENST00000480461 MEN1O00255 615 aa11.62□□□□□ -0.55
TRA2B-212ENST00000480461 NDUFS4O43181 175 aa11.62□□□□□ -0.55
TRA2B-212ENST00000480461 NPHS1O60500 1241 aa11.62□□□□□ -0.55
TRA2B-212ENST00000480461 SH3BGRLO75368 114 aa11.62□□□□□ -0.55
TRA2B-212ENST00000480461 LYPLA1O75608 230 aaPredicted RBP11.62□□□□□ -0.55
TRA2B-212ENST00000480461 ETHE1O95571 254 aa11.62□□□□□ -0.55
TRA2B-212ENST00000480461 ESRRBO95718 433 aa11.62□□□□□ -0.55
TRA2B-212ENST00000480461 MLYCDO95822 493 aa11.62□□□□□ -0.55
TRA2B-212ENST00000480461 TGFB1P01137 390 aa11.62□□□□□ -0.55
TRA2B-212ENST00000480461 SERPIND1P05546 499 aa11.62□□□□□ -0.55
TRA2B-212ENST00000480461 SERPINA6P08185 405 aa11.62□□□□□ -0.55
TRA2B-212ENST00000480461 BGNP21810 368 aa11.62□□□□□ -0.55
TRA2B-212ENST00000480461 EMP3P54852 163 aa11.62□□□□□ -0.55
TRA2B-212ENST00000480461 SRSF6Q13247 344 aaKnown RBP11.62□□□□□ -0.55
TRA2B-212ENST00000480461 PWP1Q13610 501 aa11.62□□□□□ -0.55
TRA2B-212ENST00000480461 GRM7Q14831 915 aa11.62□□□□□ -0.55
TRA2B-212ENST00000480461 CHI3L2Q15782 390 aa11.62□□□□□ -0.55
TRA2B-212ENST00000480461 UGT3A2Q3SY77 523 aa11.62□□□□□ -0.55
TRA2B-212ENST00000480461 GGTA1PQ4G0N0 100 aa11.62□□□□□ -0.55
TRA2B-212ENST00000480461 SGO1Q5FBB7 561 aa11.62□□□□□ -0.55
TRA2B-212ENST00000480461 TMEM164Q5U3C3 297 aa11.62□□□□□ -0.55
TRA2B-212ENST00000480461 CCDC81Q6ZN84 652 aa11.62□□□□□ -0.55
TRA2B-212ENST00000480461 GPRIN3Q6ZVF9 776 aa11.62□□□□□ -0.55
TRA2B-212ENST00000480461 TTLL10Q6ZVT0 673 aa11.62□□□□□ -0.55
TRA2B-212ENST00000480461 PDSS2Q86YH6 399 aa11.62□□□□□ -0.55
TRA2B-212ENST00000480461 MYLK4Q86YV6 388 aaPredicted RBP11.62□□□□□ -0.55
TRA2B-212ENST00000480461 AFAP1L2Q8N4X5 818 aa11.62□□□□□ -0.55
TRA2B-212ENST00000480461 METTL27Q8N6F8 245 aaPredicted RBP11.62□□□□□ -0.55
TRA2B-212ENST00000480461 CDYL2Q8N8U2 506 aa11.62□□□□□ -0.55
TRA2B-212ENST00000480461 AMER3Q8N944 861 aa11.62□□□□□ -0.55
TRA2B-212ENST00000480461 NKD1Q969G9 470 aa11.62□□□□□ -0.55
TRA2B-212ENST00000480461 RERGQ96A58 199 aaPredicted RBP11.62□□□□□ -0.55
TRA2B-212ENST00000480461 GBP5Q96PP8 586 aa11.62□□□□□ -0.55
TRA2B-212ENST00000480461 F2RL3Q96RI0 385 aa11.62□□□□□ -0.55
TRA2B-212ENST00000480461 MTERF1Q99551 399 aaKnown RBP11.62□□□□□ -0.55
TRA2B-212ENST00000480461 PAIP2Q9BPZ3 127 aaKnown RBP11.62□□□□□ -0.55
TRA2B-212ENST00000480461 PITHD1Q9GZP4 211 aaPredicted RBP11.62□□□□□ -0.55
TRA2B-212ENST00000480461 DRC3Q9H069 523 aa11.62□□□□□ -0.55
TRA2B-212ENST00000480461 FANCEQ9HB96 536 aa11.62□□□□□ -0.55
TRA2B-212ENST00000480461 MID1IP1Q9NPA3 183 aa11.62□□□□□ -0.55
TRA2B-212ENST00000480461 MID2Q9UJV3 735 aa11.62□□□□□ -0.55
TRA2B-212ENST00000480461 TSC22D4Q9Y3Q8 395 aa11.62□□□□□ -0.55
TRA2B-212ENST00000480461 MDC1Q14676 2089 aaKnown RBP11.61□□□□□ -0.55
TRA2B-212ENST00000480461 ANKDD1BA6NHY2 528 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 MAGEB17A8MXT2 336 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 TMEM233B4DJY2 109 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 MANBAO00462 879 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 DSCR3O14972 297 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 EFSO43281 561 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 CNOT3O75175 753 aaKnown RBP11.61□□□□□ -0.55
TRA2B-212ENST00000480461 CLEC3AO75596 197 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 ONECUT2O95948 504 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 PDYNP01213 254 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 ATXN8OSP0DMR3 200 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 PCNAP12004 261 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 CHN1P15882 459 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 ALAS2P22557 587 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 F8A1P23610 371 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 OR1D4P47884 311 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms