RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 ATP6V0D1P61421 351 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 UBE2IP63279 158 aaKnown RBP5.97□□□□□ -1.45
SF3B1-209ENST00000479532 BNIP1Q12981 228 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 SP140Q13342 867 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 PUM1Q14671 1186 aaKnown RBP eCLIP5.97□□□□□ -1.45
SF3B1-209ENST00000479532 NDUFA5Q16718 116 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 FAM83EQ2M2I3 478 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 ZNF658BQ4V348 819 aaPredicted RBP5.97□□□□□ -1.45
SF3B1-209ENST00000479532 PDCD4Q53EL6 469 aaKnown RBP5.97□□□□□ -1.45
SF3B1-209ENST00000479532 CCDC157Q569K6 752 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 ACSBG2Q5FVE4 666 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 CFAP157Q5JU67 520 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.97□□□□□ -1.45
SF3B1-209ENST00000479532 BICRALQ6AI39 1079 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 GUSBP11Q6P575 273 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 PAQR3Q6TCH7 311 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 NAPRTQ6XQN6 538 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 TMEM26Q6ZUK4 368 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 PIM3Q86V86 326 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 OOSP2Q86WS3 158 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 C17orf82Q86X59 251 aaPredicted RBP5.97□□□□□ -1.45
SF3B1-209ENST00000479532 TDRPQ86YL5 185 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 PEX5LQ8IYB4 626 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 LILRA3Q8N6C8 439 aaPredicted RBP5.97□□□□□ -1.45
SF3B1-209ENST00000479532 MCOLN3Q8TDD5 553 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 DCAKDQ8WVC6 231 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 LCN9Q8WX39 176 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 PATE1Q8WXA2 126 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 RAD51AP1Q96B01 352 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 ARL8AQ96BM9 186 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 GRAMD1AQ96CP6 724 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 CAMK1GQ96NX5 476 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 ZNF317Q96PQ6 595 aaPredicted RBP5.97□□□□□ -1.45
SF3B1-209ENST00000479532 OLFM1Q99784 485 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 CCDC3Q9BQI4 270 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 HGH1Q9BTY7 390 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 CD244Q9BZW8 370 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 DERL2Q9GZP9 239 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 STMN4Q9H169 189 aaPredicted RBP5.97□□□□□ -1.45
SF3B1-209ENST00000479532 VPS11Q9H270 941 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 SRMSQ9H3Y6 488 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 KIR3DX1Q9H7L2 352 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 CAB39LQ9H9S4 337 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 NMRAL1Q9HBL8 299 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 SLC6A20Q9NP91 592 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 SNX15Q9NRS6 342 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 PTTG2Q9NZH5 202 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 LNPEPQ9UIQ6 1025 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 SRPK3Q9UPE1 567 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 CDYLQ9Y232 598 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 MTO1Q9Y2Z2 717 aaKnown RBP5.97□□□□□ -1.45
SF3B1-209ENST00000479532 ACOT9Q9Y305 439 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 RNF215Q9Y6U7 377 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 A0A096LPK6 155 aa5.96□□□□□ -1.46
SF3B1-209ENST00000479532 SYCE1LA8MT33 242 aa5.96□□□□□ -1.46
SF3B1-209ENST00000479532 TRIM49D1C9J1S8 452 aa5.96□□□□□ -1.46
SF3B1-209ENST00000479532 TMX2-CTNND1H3BSU7 103 aa5.96□□□□□ -1.46
SF3B1-209ENST00000479532 BTN3A1O00481 513 aa5.96□□□□□ -1.46
SF3B1-209ENST00000479532 PHGDHO43175 533 aaKnown RBP5.96□□□□□ -1.46
SF3B1-209ENST00000479532 PFDN1O60925 122 aa5.96□□□□□ -1.46
SF3B1-209ENST00000479532 PSIP1O75475 530 aaKnown RBP5.96□□□□□ -1.46
SF3B1-209ENST00000479532 TCEA3O75764 348 aa5.96□□□□□ -1.46
SF3B1-209ENST00000479532 UBXN7O94888 489 aa5.96□□□□□ -1.46
SF3B1-209ENST00000479532 MATN4O95460 622 aa5.96□□□□□ -1.46
SF3B1-209ENST00000479532 C1orf105O95561 183 aa5.96□□□□□ -1.46
SF3B1-209ENST00000479532 C1QAP02745 245 aa5.96□□□□□ -1.46
SF3B1-209ENST00000479532 HPXP02790 462 aa5.96□□□□□ -1.46
SF3B1-209ENST00000479532 MT-ND3P03897 115 aa5.96□□□□□ -1.46
SF3B1-209ENST00000479532 SHBGP04278 402 aa5.96□□□□□ -1.46
SF3B1-209ENST00000479532 RPLP0P05388 317 aaKnown RBP5.96□□□□□ -1.46
SF3B1-209ENST00000479532 PROS1P07225 676 aa5.96□□□□□ -1.46
SF3B1-209ENST00000479532 ENO2P09104 434 aaPredicted RBP5.96□□□□□ -1.46
SF3B1-209ENST00000479532 LTA4HP09960 611 aaKnown RBP5.96□□□□□ -1.46
SF3B1-209ENST00000479532 PABPC4LP0CB38 370 aaKnown RBP5.96□□□□□ -1.46
SF3B1-209ENST00000479532 ACADLP28330 430 aa5.96□□□□□ -1.46
SF3B1-209ENST00000479532 GDNFP39905 211 aa5.96□□□□□ -1.46
SF3B1-209ENST00000479532 SLC26A3P40879 764 aa5.96□□□□□ -1.46
SF3B1-209ENST00000479532 SLCO1A2P46721 670 aa5.96□□□□□ -1.46
SF3B1-209ENST00000479532 RASSF2P50749 326 aa5.96□□□□□ -1.46
SF3B1-209ENST00000479532 AP1S2P56377 157 aa5.96□□□□□ -1.46
SF3B1-209ENST00000479532 SIM1P81133 766 aaPredicted RBP5.96□□□□□ -1.46
SF3B1-209ENST00000479532 PRKG2Q13237 762 aa5.96□□□□□ -1.46
SF3B1-209ENST00000479532 BMPR2Q13873 1038 aa5.96□□□□□ -1.46
SF3B1-209ENST00000479532 GPR18Q14330 331 aa5.96□□□□□ -1.46
SF3B1-209ENST00000479532 CSHL1Q14406 222 aa5.96□□□□□ -1.46
SF3B1-209ENST00000479532 GBX1Q14549 363 aa5.96□□□□□ -1.46
SF3B1-209ENST00000479532 NR1D2Q14995 579 aa5.96□□□□□ -1.46
SF3B1-209ENST00000479532 RASA2Q15283 850 aa5.96□□□□□ -1.46
SF3B1-209ENST00000479532 UBAP2Q5T6F2 1119 aaKnown RBP5.96□□□□□ -1.46
SF3B1-209ENST00000479532 STEAP3Q658P3 488 aa5.96□□□□□ -1.46
SF3B1-209ENST00000479532 THOC7Q6I9Y2 204 aaKnown RBP5.96□□□□□ -1.46
SF3B1-209ENST00000479532 DUS1LQ6P1R4 473 aaKnown RBP5.96□□□□□ -1.46
SF3B1-209ENST00000479532 PIWIL4Q7Z3Z4 852 aaKnown RBP5.96□□□□□ -1.46
SF3B1-209ENST00000479532 SPRED1Q7Z699 444 aa5.96□□□□□ -1.46
SF3B1-209ENST00000479532 CPLX4Q7Z7G2 160 aa5.96□□□□□ -1.46
SF3B1-209ENST00000479532 ADAMTSL2Q86TH1 951 aa5.96□□□□□ -1.46
SF3B1-209ENST00000479532 EXOC3L1Q86VI1 746 aa5.96□□□□□ -1.46
SF3B1-209ENST00000479532 PLXDC1Q8IUK5 500 aa5.96□□□□□ -1.46
SF3B1-209ENST00000479532 VRK3Q8IV63 474 aa5.96□□□□□ -1.46
SF3B1-209ENST00000479532 Q8N9G6 341 aaPredicted RBP5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms