RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 RAB3AP20336 220 aa12.69□□□□□ -0.38
CNKSR3-204ENST00000479339 MAP2K3P46734 347 aa12.69□□□□□ -0.38
CNKSR3-204ENST00000479339 IL1RL1Q01638 556 aa12.69□□□□□ -0.38
CNKSR3-204ENST00000479339 CYP4F3Q08477 520 aa12.69□□□□□ -0.38
CNKSR3-204ENST00000479339 ZNF273Q14593 569 aa12.69□□□□□ -0.38
CNKSR3-204ENST00000479339 HECTD2Q5U5R9 776 aa12.69□□□□□ -0.38
CNKSR3-204ENST00000479339 SAXO2Q658L1 398 aa12.69□□□□□ -0.38
CNKSR3-204ENST00000479339 TPGS2Q68CL5 300 aa12.69□□□□□ -0.38
CNKSR3-204ENST00000479339 GRASPQ7Z6J2 395 aaPredicted RBP12.69□□□□□ -0.38
CNKSR3-204ENST00000479339 GALNT10Q86SR1 603 aa12.69□□□□□ -0.38
CNKSR3-204ENST00000479339 TMEM130Q8N3G9 435 aa12.69□□□□□ -0.38
CNKSR3-204ENST00000479339 C1orf127Q8N9H9 656 aa12.69□□□□□ -0.38
CNKSR3-204ENST00000479339 ZNF461Q8TAF7 563 aa12.69□□□□□ -0.38
CNKSR3-204ENST00000479339 PROKR1Q8TCW9 393 aa12.69□□□□□ -0.38
CNKSR3-204ENST00000479339 RBPMSQ93062 196 aaKnown RBP12.69□□□□□ -0.38
CNKSR3-204ENST00000479339 TEKT5Q96M29 485 aa12.69□□□□□ -0.38
CNKSR3-204ENST00000479339 SECISBP2Q96T21 854 aaKnown RBP12.69□□□□□ -0.38
CNKSR3-204ENST00000479339 USB1Q9BQ65 265 aaKnown RBP12.69□□□□□ -0.38
CNKSR3-204ENST00000479339 TBL1YQ9BQ87 522 aa12.69□□□□□ -0.38
CNKSR3-204ENST00000479339 TNKS2Q9H2K2 1166 aa12.69□□□□□ -0.38
CNKSR3-204ENST00000479339 HEBP1Q9NRV9 189 aa12.69□□□□□ -0.38
CNKSR3-204ENST00000479339 KRT84Q9NSB2 600 aa12.69□□□□□ -0.38
CNKSR3-204ENST00000479339 TREX1Q9NSU2 369 aa12.69□□□□□ -0.38
CNKSR3-204ENST00000479339 KIF17Q9P2E2 1029 aa12.69□□□□□ -0.38
CNKSR3-204ENST00000479339 MAFFQ9ULX9 164 aa12.69□□□□□ -0.38
CNKSR3-204ENST00000479339 STUB1Q9UNE7 303 aa12.69□□□□□ -0.38
CNKSR3-204ENST00000479339 ANK1P16157 1881 aa12.69□□□□□ -0.38
CNKSR3-204ENST00000479339 RPS10-NUDT3A0A1W2PQS6 291 aa12.68□□□□□ -0.38
CNKSR3-204ENST00000479339 DFFAO00273 331 aa12.68□□□□□ -0.38
CNKSR3-204ENST00000479339 STAU1O95793 577 aaKnown RBP12.68□□□□□ -0.38
CNKSR3-204ENST00000479339 HLA-DQB1P01920 261 aa12.68□□□□□ -0.38
CNKSR3-204ENST00000479339 RPS17P08708 135 aaKnown RBP12.68□□□□□ -0.38
CNKSR3-204ENST00000479339 CSF3P09919 207 aa12.68□□□□□ -0.38
CNKSR3-204ENST00000479339 LAMP2P13473 410 aa12.68□□□□□ -0.38
CNKSR3-204ENST00000479339 AZGP1P25311 298 aaKnown RBP12.68□□□□□ -0.38
CNKSR3-204ENST00000479339 CLDN20P56880 219 aa12.68□□□□□ -0.38
CNKSR3-204ENST00000479339 RAB14P61106 215 aa12.68□□□□□ -0.38
CNKSR3-204ENST00000479339 CTXN3Q4LDR2 81 aa12.68□□□□□ -0.38
CNKSR3-204ENST00000479339 ZMAT1Q5H9K5 638 aa12.68□□□□□ -0.38
CNKSR3-204ENST00000479339 CACHD1Q5VU97 1274 aa12.68□□□□□ -0.38
CNKSR3-204ENST00000479339 OR2T5Q6IEZ7 315 aa12.68□□□□□ -0.38
CNKSR3-204ENST00000479339 ESRP1Q6NXG1 681 aaKnown RBP12.68□□□□□ -0.38
CNKSR3-204ENST00000479339 FAM131AQ6UXB0 335 aa12.68□□□□□ -0.38
CNKSR3-204ENST00000479339 LPCAT1Q8NF37 534 aa12.68□□□□□ -0.38
CNKSR3-204ENST00000479339 OR52H1Q8NGJ2 320 aa12.68□□□□□ -0.38
CNKSR3-204ENST00000479339 OR2T29Q8NH02 315 aa12.68□□□□□ -0.38
CNKSR3-204ENST00000479339 RHEBL1Q8TAI7 183 aa12.68□□□□□ -0.38
CNKSR3-204ENST00000479339 ST8SIA4Q92187 359 aa12.68□□□□□ -0.38
CNKSR3-204ENST00000479339 HRASLS5Q96KN8 279 aa12.68□□□□□ -0.38
CNKSR3-204ENST00000479339 GABARAPL3Q9BY60 117 aa12.68□□□□□ -0.38
CNKSR3-204ENST00000479339 RACGAP1Q9H0H5 632 aa12.68□□□□□ -0.38
CNKSR3-204ENST00000479339 PPIL3Q9H2H8 161 aaKnown RBP12.68□□□□□ -0.38
CNKSR3-204ENST00000479339 RASSF1Q9NS23 344 aa12.68□□□□□ -0.38
CNKSR3-204ENST00000479339 RBFOX1Q9NWB1 397 aaKnown RBP12.68□□□□□ -0.38
CNKSR3-204ENST00000479339 CUEDC1Q9NWM3 386 aaPredicted RBP12.68□□□□□ -0.38
CNKSR3-204ENST00000479339 UTS2RQ9UKP6 389 aa12.68□□□□□ -0.38
CNKSR3-204ENST00000479339 DUSP12Q9UNI6 340 aa12.68□□□□□ -0.38
CNKSR3-204ENST00000479339 TNPO3Q9Y5L0 923 aaKnown RBP12.68□□□□□ -0.38
CNKSR3-204ENST00000479339 A0A096LPI6 279 aa12.67□□□□□ -0.38
CNKSR3-204ENST00000479339 ANHXE9PGG2 379 aa12.67□□□□□ -0.38
CNKSR3-204ENST00000479339 CACNG3O60359 315 aa12.67□□□□□ -0.38
CNKSR3-204ENST00000479339 TSC22D2O75157 780 aa12.67□□□□□ -0.38
CNKSR3-204ENST00000479339 PTP4A3O75365 173 aa12.67□□□□□ -0.38
CNKSR3-204ENST00000479339 CREG1O75629 220 aa12.67□□□□□ -0.38
CNKSR3-204ENST00000479339 OAZ2O95190 189 aa12.67□□□□□ -0.38
CNKSR3-204ENST00000479339 NFICP08651 508 aa12.67□□□□□ -0.38
CNKSR3-204ENST00000479339 UROSP10746 265 aa12.67□□□□□ -0.38
CNKSR3-204ENST00000479339 ZNF37AP17032 561 aaPredicted RBP12.67□□□□□ -0.38
CNKSR3-204ENST00000479339 NPR3P17342 541 aa12.67□□□□□ -0.38
CNKSR3-204ENST00000479339 C21orf33P30042 268 aaPredicted RBP12.67□□□□□ -0.38
CNKSR3-204ENST00000479339 AIF1P55008 147 aa12.67□□□□□ -0.38
CNKSR3-204ENST00000479339 NTHL1P78549 312 aa12.67□□□□□ -0.38
CNKSR3-204ENST00000479339 FLI1Q01543 452 aaPredicted RBP12.67□□□□□ -0.38
CNKSR3-204ENST00000479339 PPP1R8Q12972 351 aaKnown RBP12.67□□□□□ -0.38
CNKSR3-204ENST00000479339 TMEM132DQ14C87 1099 aa12.67□□□□□ -0.38
CNKSR3-204ENST00000479339 SOWAHCQ53LP3 525 aaPredicted RBP12.67□□□□□ -0.38
CNKSR3-204ENST00000479339 INO80DQ53TQ3 878 aaPredicted RBP12.67□□□□□ -0.38
CNKSR3-204ENST00000479339 C10orf62Q5T681 223 aaPredicted RBP12.67□□□□□ -0.38
CNKSR3-204ENST00000479339 ZNF549Q6P9A3 640 aa12.67□□□□□ -0.38
CNKSR3-204ENST00000479339 TRIM69Q86WT6 500 aa12.67□□□□□ -0.38
CNKSR3-204ENST00000479339 ZSWIM9Q86XI8 627 aa12.67□□□□□ -0.38
CNKSR3-204ENST00000479339 ZDHHC21Q8IVQ6 265 aa12.67□□□□□ -0.38
CNKSR3-204ENST00000479339 TCEAL8Q8IYN2 117 aa12.67□□□□□ -0.38
CNKSR3-204ENST00000479339 NLGN4YQ8NFZ3 816 aaPredicted RBP12.67□□□□□ -0.38
CNKSR3-204ENST00000479339 CHTF18Q8WVB6 975 aa12.67□□□□□ -0.38
CNKSR3-204ENST00000479339 ANKRD49Q8WVL7 239 aa12.67□□□□□ -0.38
CNKSR3-204ENST00000479339 ZNF599Q96NL3 588 aa12.67□□□□□ -0.38
CNKSR3-204ENST00000479339 KCNA7Q96RP8 456 aa12.67□□□□□ -0.38
CNKSR3-204ENST00000479339 EVA1BQ9NVM1 165 aa12.67□□□□□ -0.38
CNKSR3-204ENST00000479339 UBQLN2Q9UHD9 624 aa12.67□□□□□ -0.38
CNKSR3-204ENST00000479339 MAN2B2Q9Y2E5 1009 aa12.67□□□□□ -0.38
CNKSR3-204ENST00000479339 NEUROG3Q9Y4Z2 214 aa12.67□□□□□ -0.38
CNKSR3-204ENST00000479339 ZNF98A6NK75 572 aa12.67□□□□□ -0.38
CNKSR3-204ENST00000479339 PIRO00625 290 aa12.67□□□□□ -0.38
CNKSR3-204ENST00000479339 KHNYNO15037 678 aaKnown RBP12.67□□□□□ -0.38
CNKSR3-204ENST00000479339 ADAM11O75078 769 aa12.67□□□□□ -0.38
CNKSR3-204ENST00000479339 TYMPP19971 482 aa12.67□□□□□ -0.38
CNKSR3-204ENST00000479339 PXNP49023 591 aaPredicted RBP12.67□□□□□ -0.38
CNKSR3-204ENST00000479339 CCT3P49368 545 aaKnown RBP12.67□□□□□ -0.38
CNKSR3-204ENST00000479339 RPP38P78345 283 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms