RNA–Protein interactions for RNA: ENST00000478840.1

UPF3B-203, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3B, Length 748 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-203ENST00000478840 NR0B1P51843 470 aaKnown RBP4.61□□□□□ -1.67
UPF3B-203ENST00000478840 OR1D5P58170 312 aa4.61□□□□□ -1.67
UPF3B-203ENST00000478840 NANOS2P60321 138 aaKnown RBP4.61□□□□□ -1.67
UPF3B-203ENST00000478840 GMFBP60983 142 aa4.61□□□□□ -1.67
UPF3B-203ENST00000478840 POLR2FP61218 127 aaKnown RBP4.61□□□□□ -1.67
UPF3B-203ENST00000478840 CDH18Q13634 790 aa4.61□□□□□ -1.67
UPF3B-203ENST00000478840 TRIM29Q14134 588 aa4.61□□□□□ -1.67
UPF3B-203ENST00000478840 P2RY6Q15077 328 aa4.61□□□□□ -1.67
UPF3B-203ENST00000478840 STX1AQ16623 288 aa4.61□□□□□ -1.67
UPF3B-203ENST00000478840 ACCSLQ4AC99 568 aa4.61□□□□□ -1.67
UPF3B-203ENST00000478840 LCN1P1Q5VSP4 162 aa4.61□□□□□ -1.67
UPF3B-203ENST00000478840 PRAMEF7Q5VXH5 474 aa4.61□□□□□ -1.67
UPF3B-203ENST00000478840 OR6B2Q6IFH4 312 aa4.61□□□□□ -1.67
UPF3B-203ENST00000478840 DHRS11Q6UWP2 260 aa4.61□□□□□ -1.67
UPF3B-203ENST00000478840 CYP4V2Q6ZWL3 525 aaPredicted RBP4.61□□□□□ -1.67
UPF3B-203ENST00000478840 TAF8Q7Z7C8 310 aa4.61□□□□□ -1.67
UPF3B-203ENST00000478840 SMYD1Q8NB12 490 aa4.61□□□□□ -1.67
UPF3B-203ENST00000478840 KLHDC9Q8NEP7 349 aa4.61□□□□□ -1.67
UPF3B-203ENST00000478840 OR4C15Q8NGM1 316 aa4.61□□□□□ -1.67
UPF3B-203ENST00000478840 OR13A1Q8NGR1 328 aa4.61□□□□□ -1.67
UPF3B-203ENST00000478840 NUDCD2Q8WVJ2 157 aa4.61□□□□□ -1.67
UPF3B-203ENST00000478840 SEPT8Q92599 483 aa4.61□□□□□ -1.67
UPF3B-203ENST00000478840 ATG10Q9H0Y0 220 aa4.61□□□□□ -1.67
UPF3B-203ENST00000478840 TRPV6Q9H1D0 765 aa4.61□□□□□ -1.67
UPF3B-203ENST00000478840 EGLN3Q9H6Z9 239 aa4.61□□□□□ -1.67
UPF3B-203ENST00000478840 TBC1D13Q9NVG8 400 aa4.61□□□□□ -1.67
UPF3B-203ENST00000478840 PSORS1C1Q9UIG5 152 aa4.61□□□□□ -1.67
UPF3B-203ENST00000478840 ELF5Q9UKW6 265 aaPredicted RBP4.61□□□□□ -1.67
UPF3B-203ENST00000478840 FAF1Q9UNN5 650 aaPredicted RBP4.61□□□□□ -1.67
UPF3B-203ENST00000478840 ERVK-19Q9WJR5 959 aa4.61□□□□□ -1.67
UPF3B-203ENST00000478840 MRPS2Q9Y399 296 aaKnown RBP4.61□□□□□ -1.67
UPF3B-203ENST00000478840 SYT7O43581 403 aa4.6□□□□□ -1.67
UPF3B-203ENST00000478840 KIF5CO60282 957 aa4.6□□□□□ -1.67
UPF3B-203ENST00000478840 OR6B1O95007 311 aa4.6□□□□□ -1.67
UPF3B-203ENST00000478840 GPIP06744 558 aa4.6□□□□□ -1.67
UPF3B-203ENST00000478840 HEXBP07686 556 aa4.6□□□□□ -1.67
UPF3B-203ENST00000478840 SERPINF2P08697 491 aa4.6□□□□□ -1.67
UPF3B-203ENST00000478840 NUDT17P0C025 328 aa4.6□□□□□ -1.67
UPF3B-203ENST00000478840 GHRP10912 638 aa4.6□□□□□ -1.67
UPF3B-203ENST00000478840 CETPP11597 493 aa4.6□□□□□ -1.67
UPF3B-203ENST00000478840 ANPEPP15144 967 aa4.6□□□□□ -1.67
UPF3B-203ENST00000478840 FCARP24071 287 aa4.6□□□□□ -1.67
UPF3B-203ENST00000478840 ITGA3P26006 1051 aa4.6□□□□□ -1.67
UPF3B-203ENST00000478840 CEACAM8P31997 349 aaPredicted RBP4.6□□□□□ -1.67
UPF3B-203ENST00000478840 MAGEA11P43364 429 aa4.6□□□□□ -1.67
UPF3B-203ENST00000478840 NSFP46459 744 aaKnown RBP4.6□□□□□ -1.67
UPF3B-203ENST00000478840 IRX4P78413 519 aa4.6□□□□□ -1.67
UPF3B-203ENST00000478840 GABPAQ06546 454 aa4.6□□□□□ -1.67
UPF3B-203ENST00000478840 GPR50Q13585 617 aa4.6□□□□□ -1.67
UPF3B-203ENST00000478840 DPYSQ14117 519 aa4.6□□□□□ -1.67
UPF3B-203ENST00000478840 GIT2Q14161 759 aa4.6□□□□□ -1.67
UPF3B-203ENST00000478840 GRB14Q14449 540 aa4.6□□□□□ -1.67
UPF3B-203ENST00000478840 SQLEQ14534 574 aa4.6□□□□□ -1.67
UPF3B-203ENST00000478840 TRADDQ15628 312 aa4.6□□□□□ -1.67
UPF3B-203ENST00000478840 WDR38Q5JTN6 314 aa4.6□□□□□ -1.67
UPF3B-203ENST00000478840 ZNF776Q68DI1 518 aaPredicted RBP4.6□□□□□ -1.67
UPF3B-203ENST00000478840 LEKR1Q6ZMV7 388 aa4.6□□□□□ -1.67
UPF3B-203ENST00000478840 WDR88Q6ZMY6 472 aa4.6□□□□□ -1.67
UPF3B-203ENST00000478840 C15orf52Q6ZUT6 534 aaKnown RBP4.6□□□□□ -1.67
UPF3B-203ENST00000478840 SYVN1Q86TM6 617 aa4.6□□□□□ -1.67
UPF3B-203ENST00000478840 POC1AQ8NBT0 407 aa4.6□□□□□ -1.67
UPF3B-203ENST00000478840 DMBX1Q8NFW5 382 aa4.6□□□□□ -1.67
UPF3B-203ENST00000478840 OR4A16Q8NH70 328 aa4.6□□□□□ -1.67
UPF3B-203ENST00000478840 OR1L3Q8NH93 324 aa4.6□□□□□ -1.67
UPF3B-203ENST00000478840 HPSE2Q8WWQ2 592 aa4.6□□□□□ -1.67
UPF3B-203ENST00000478840 LPAR4Q99677 370 aa4.6□□□□□ -1.67
UPF3B-203ENST00000478840 CCM2Q9BSQ5 444 aa4.6□□□□□ -1.67
UPF3B-203ENST00000478840 NUSAP1Q9BXS6 441 aaKnown RBP4.6□□□□□ -1.67
UPF3B-203ENST00000478840 PITPNM3Q9BZ71 974 aa4.6□□□□□ -1.67
UPF3B-203ENST00000478840 FAM49AQ9H0Q0 323 aaPredicted RBP4.6□□□□□ -1.67
UPF3B-203ENST00000478840 DPEP3Q9H4B8 488 aa4.6□□□□□ -1.67
UPF3B-203ENST00000478840 PPANQ9NQ55 473 aaKnown RBP4.6□□□□□ -1.67
UPF3B-203ENST00000478840 ACOXLQ9NUZ1 547 aa4.6□□□□□ -1.67
UPF3B-203ENST00000478840 SH3BGRL2Q9UJC5 107 aa4.6□□□□□ -1.67
UPF3B-203ENST00000478840 UMODL1Q5DID0 1318 aa4.6□□□□□ -1.67
UPF3B-203ENST00000478840 SPATA31D1Q6ZQQ2 1576 aa4.6□□□□□ -1.67
UPF3B-203ENST00000478840 A0A1B0GUV1 79 aa4.59□□□□□ -1.67
UPF3B-203ENST00000478840 ATP6AP2A0A1C7CYW4 349 aa4.59□□□□□ -1.67
UPF3B-203ENST00000478840 ZNF732B4DXR9 585 aa4.59□□□□□ -1.67
UPF3B-203ENST00000478840 FPGTO14772 594 aa4.59□□□□□ -1.67
UPF3B-203ENST00000478840 CHUKO15111 745 aa4.59□□□□□ -1.67
UPF3B-203ENST00000478840 EPHB6O15197 1021 aa4.59□□□□□ -1.67
UPF3B-203ENST00000478840 NME2P1O60361 137 aa4.59□□□□□ -1.67
UPF3B-203ENST00000478840 ATP8B3O60423 1300 aa4.59□□□□□ -1.67
UPF3B-203ENST00000478840 PAK4O96013 591 aaPredicted RBP4.59□□□□□ -1.67
UPF3B-203ENST00000478840 VTNP04004 478 aa4.59□□□□□ -1.67
UPF3B-203ENST00000478840 EDN1P05305 212 aa4.59□□□□□ -1.67
UPF3B-203ENST00000478840 KRT5P13647 590 aa4.59□□□□□ -1.67
UPF3B-203ENST00000478840 PLA2G2AP14555 144 aa4.59□□□□□ -1.67
UPF3B-203ENST00000478840 ITGB6P18564 788 aa4.59□□□□□ -1.67
UPF3B-203ENST00000478840 OR1D2P34982 312 aa4.59□□□□□ -1.67
UPF3B-203ENST00000478840 HSD17B7P56937 341 aa4.59□□□□□ -1.67
UPF3B-203ENST00000478840 SSTP61278 116 aa4.59□□□□□ -1.67
UPF3B-203ENST00000478840 CCZ1BP86790 482 aa4.59□□□□□ -1.67
UPF3B-203ENST00000478840 CCZ1P86791 482 aaPredicted RBP4.59□□□□□ -1.67
UPF3B-203ENST00000478840 PLPP4Q5VZY2 271 aa4.59□□□□□ -1.67
UPF3B-203ENST00000478840 OR4C11Q6IEV9 310 aa4.59□□□□□ -1.67
UPF3B-203ENST00000478840 SLC27A4Q6P1M0 643 aa4.59□□□□□ -1.67
UPF3B-203ENST00000478840 UNC5DQ6UXZ4 953 aa4.59□□□□□ -1.67
UPF3B-203ENST00000478840 C9orf139Q6ZV77 190 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms