RNA–Protein interactions for RNA: ENST00000478769.1

NUDCD3-207, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 315 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-207ENST00000478769 FOXE1O00358 373 aaPredicted RBP12.88□□□□□ -0.35
NUDCD3-207ENST00000478769 DSCR3O14972 297 aa12.88□□□□□ -0.35
NUDCD3-207ENST00000478769 B3GALT4O96024 378 aa12.88□□□□□ -0.35
NUDCD3-207ENST00000478769 TGFB1P01137 390 aa12.88□□□□□ -0.35
NUDCD3-207ENST00000478769 KRT6AP02538 564 aa12.88□□□□□ -0.35
NUDCD3-207ENST00000478769 KRT6BP04259 564 aa12.88□□□□□ -0.35
NUDCD3-207ENST00000478769 FGF4P08620 206 aa12.88□□□□□ -0.35
NUDCD3-207ENST00000478769 RORAP35398 523 aa12.88□□□□□ -0.35
NUDCD3-207ENST00000478769 KRT6CP48668 564 aa12.88□□□□□ -0.35
NUDCD3-207ENST00000478769 EMP3P54852 163 aa12.88□□□□□ -0.35
NUDCD3-207ENST00000478769 PHEXP78562 749 aa12.88□□□□□ -0.35
NUDCD3-207ENST00000478769 MUM1Q2TAK8 710 aa12.88□□□□□ -0.35
NUDCD3-207ENST00000478769 UGT3A2Q3SY77 523 aa12.88□□□□□ -0.35
NUDCD3-207ENST00000478769 MANEAQ5SRI9 462 aa12.88□□□□□ -0.35
NUDCD3-207ENST00000478769 C10orf62Q5T681 223 aaPredicted RBP12.88□□□□□ -0.35
NUDCD3-207ENST00000478769 TMEM164Q5U3C3 297 aa12.88□□□□□ -0.35
NUDCD3-207ENST00000478769 C1orf189Q5VU69 101 aa12.88□□□□□ -0.35
NUDCD3-207ENST00000478769 GARNL3Q5VVW2 1013 aa12.88□□□□□ -0.35
NUDCD3-207ENST00000478769 KHDRBS2Q5VWX1 349 aaKnown RBP12.88□□□□□ -0.35
NUDCD3-207ENST00000478769 ZNF385CQ66K41 422 aaPredicted RBP12.88□□□□□ -0.35
NUDCD3-207ENST00000478769 SCIMPQ6UWF3 145 aa12.88□□□□□ -0.35
NUDCD3-207ENST00000478769 TTLL10Q6ZVT0 673 aa12.88□□□□□ -0.35
NUDCD3-207ENST00000478769 UBE3DQ7Z6J8 389 aa12.88□□□□□ -0.35
NUDCD3-207ENST00000478769 PDSS2Q86YH6 399 aa12.88□□□□□ -0.35
NUDCD3-207ENST00000478769 AFAP1L2Q8N4X5 818 aa12.88□□□□□ -0.35
NUDCD3-207ENST00000478769 UTP15Q8TED0 518 aaKnown RBP12.88□□□□□ -0.35
NUDCD3-207ENST00000478769 GAL3ST3Q96A11 431 aa12.88□□□□□ -0.35
NUDCD3-207ENST00000478769 MS4A6EQ96DS6 147 aa12.88□□□□□ -0.35
NUDCD3-207ENST00000478769 CMTM7Q96FZ5 175 aa12.88□□□□□ -0.35
NUDCD3-207ENST00000478769 MAGEB18Q96M61 343 aa12.88□□□□□ -0.35
NUDCD3-207ENST00000478769 GBP5Q96PP8 586 aa12.88□□□□□ -0.35
NUDCD3-207ENST00000478769 ACPTQ9BZG2 426 aa12.88□□□□□ -0.35
NUDCD3-207ENST00000478769 REXO4Q9GZR2 422 aaKnown RBP12.88□□□□□ -0.35
NUDCD3-207ENST00000478769 TUBB1Q9H4B7 451 aa12.88□□□□□ -0.35
NUDCD3-207ENST00000478769 PRM3Q9NNZ6 103 aa12.88□□□□□ -0.35
NUDCD3-207ENST00000478769 THAP1Q9NVV9 213 aa12.88□□□□□ -0.35
NUDCD3-207ENST00000478769 ANGPTL2Q9UKU9 493 aa12.88□□□□□ -0.35
NUDCD3-207ENST00000478769 PPT2Q9UMR5 302 aa12.88□□□□□ -0.35
NUDCD3-207ENST00000478769 RAP2CQ9Y3L5 183 aa12.88□□□□□ -0.35
NUDCD3-207ENST00000478769 TRAF6Q9Y4K3 522 aa12.88□□□□□ -0.35
NUDCD3-207ENST00000478769 TMEM184BQ9Y519 407 aaPredicted RBP12.88□□□□□ -0.35
NUDCD3-207ENST00000478769 DNAJC15Q9Y5T4 150 aa12.88□□□□□ -0.35
NUDCD3-207ENST00000478769 ZFHX4Q86UP3 3567 aa12.87□□□□□ -0.35
NUDCD3-207ENST00000478769 APC2O95996 2303 aa12.87□□□□□ -0.35
NUDCD3-207ENST00000478769 A0A0G2JN53 185 aa12.87□□□□□ -0.35
NUDCD3-207ENST00000478769 SAP18O00422 153 aaKnown RBP12.87□□□□□ -0.35
NUDCD3-207ENST00000478769 ERI3O43414 337 aaKnown RBP12.87□□□□□ -0.35
NUDCD3-207ENST00000478769 FOXS1O43638 330 aa12.87□□□□□ -0.35
NUDCD3-207ENST00000478769 ULK1O75385 1050 aa12.87□□□□□ -0.35
NUDCD3-207ENST00000478769 SNUPNO95149 360 aaKnown RBP12.87□□□□□ -0.35
NUDCD3-207ENST00000478769 JUNP05412 331 aaKnown RBP12.87□□□□□ -0.35
NUDCD3-207ENST00000478769 IL1RNP18510 177 aa12.87□□□□□ -0.35
NUDCD3-207ENST00000478769 ARSFP54793 590 aa12.87□□□□□ -0.35
NUDCD3-207ENST00000478769 RAB8AP61006 207 aa12.87□□□□□ -0.35
NUDCD3-207ENST00000478769 STXBP1P61764 594 aaKnown RBP12.87□□□□□ -0.35
NUDCD3-207ENST00000478769 GUCY1A3Q02108 690 aa12.87□□□□□ -0.35
NUDCD3-207ENST00000478769 CSTF3Q12996 717 aaKnown RBP12.87□□□□□ -0.35
NUDCD3-207ENST00000478769 YOD1Q5VVQ6 348 aaPredicted RBP12.87□□□□□ -0.35
NUDCD3-207ENST00000478769 RGS9BPQ6ZS82 235 aa12.87□□□□□ -0.35
NUDCD3-207ENST00000478769 ABHD13Q7L211 337 aa12.87□□□□□ -0.35
NUDCD3-207ENST00000478769 ERMP1Q7Z2K6 904 aa12.87□□□□□ -0.35
NUDCD3-207ENST00000478769 TIPARPQ7Z3E1 657 aaKnown RBP12.87□□□□□ -0.35
NUDCD3-207ENST00000478769 ZFAND4Q86XD8 727 aa12.87□□□□□ -0.35
NUDCD3-207ENST00000478769 CLYBLQ8N0X4 340 aa12.87□□□□□ -0.35
NUDCD3-207ENST00000478769 GALNT6Q8NCL4 622 aa12.87□□□□□ -0.35
NUDCD3-207ENST00000478769 OR2L5Q8NG80 312 aa12.87□□□□□ -0.35
NUDCD3-207ENST00000478769 OR9A4Q8NGU2 314 aa12.87□□□□□ -0.35
NUDCD3-207ENST00000478769 TWIST2Q8WVJ9 160 aa12.87□□□□□ -0.35
NUDCD3-207ENST00000478769 GATA6Q92908 595 aa12.87□□□□□ -0.35
NUDCD3-207ENST00000478769 CLIP3Q96DZ5 547 aa12.87□□□□□ -0.35
NUDCD3-207ENST00000478769 C17orf62Q9BQA9 187 aa12.87□□□□□ -0.35
NUDCD3-207ENST00000478769 ILKAPQ9H0C8 392 aaPredicted RBP12.87□□□□□ -0.35
NUDCD3-207ENST00000478769 BRF2Q9HAW0 419 aa12.87□□□□□ -0.35
NUDCD3-207ENST00000478769 SLCO1B3Q9NPD5 702 aa12.87□□□□□ -0.35
NUDCD3-207ENST00000478769 LHX9Q9NQ69 397 aa12.87□□□□□ -0.35
NUDCD3-207ENST00000478769 THSD1Q9NS62 852 aa12.87□□□□□ -0.35
NUDCD3-207ENST00000478769 PNPOQ9NVS9 261 aa12.87□□□□□ -0.35
NUDCD3-207ENST00000478769 FAM53CQ9NYF3 392 aa12.87□□□□□ -0.35
NUDCD3-207ENST00000478769 NDOR1Q9UHB4 597 aa12.87□□□□□ -0.35
NUDCD3-207ENST00000478769 SLC22A7Q9Y694 548 aa12.87□□□□□ -0.35
NUDCD3-207ENST00000478769 A0A0A6YYC8 382 aaPredicted RBP12.86□□□□□ -0.35
NUDCD3-207ENST00000478769 ZNF860A6NHJ4 632 aa12.86□□□□□ -0.35
NUDCD3-207ENST00000478769 I3L1I5 382 aaPredicted RBP12.86□□□□□ -0.35
NUDCD3-207ENST00000478769 RTCAO00442 366 aaKnown RBP12.86□□□□□ -0.35
NUDCD3-207ENST00000478769 PLPP1O14494 284 aa12.86□□□□□ -0.35
NUDCD3-207ENST00000478769 PIP5K1BO14986 540 aa12.86□□□□□ -0.35
NUDCD3-207ENST00000478769 GALR3O60755 368 aaPredicted RBP12.86□□□□□ -0.35
NUDCD3-207ENST00000478769 SKAP2O75563 359 aaPredicted RBP12.86□□□□□ -0.35
NUDCD3-207ENST00000478769 KLHL18O94889 574 aa12.86□□□□□ -0.35
NUDCD3-207ENST00000478769 HBQ1P09105 142 aa12.86□□□□□ -0.35
NUDCD3-207ENST00000478769 SMIM10L1P0DMW3 83 aa12.86□□□□□ -0.35
NUDCD3-207ENST00000478769 HSD3B1P14060 373 aa12.86□□□□□ -0.35
NUDCD3-207ENST00000478769 ALOX12P18054 663 aa12.86□□□□□ -0.35
NUDCD3-207ENST00000478769 PTX3P26022 381 aaPredicted RBP12.86□□□□□ -0.35
NUDCD3-207ENST00000478769 HSD3B2P26439 372 aa12.86□□□□□ -0.35
NUDCD3-207ENST00000478769 PLA2G16P53816 162 aa12.86□□□□□ -0.35
NUDCD3-207ENST00000478769 HMGCS1Q01581 520 aa12.86□□□□□ -0.35
NUDCD3-207ENST00000478769 CUL3Q13618 768 aa12.86□□□□□ -0.35
NUDCD3-207ENST00000478769 FAM53BQ14153 422 aa12.86□□□□□ -0.35
NUDCD3-207ENST00000478769 HERC3Q15034 1050 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms