RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 DNAJB6O75190 326 aa14.74□□□□□ -0.05
HMGA1-206ENST00000478214 SMIM10L1P0DMW3 83 aa14.74□□□□□ -0.05
HMGA1-206ENST00000478214 ACPPP15309 386 aa14.74□□□□□ -0.05
HMGA1-206ENST00000478214 PGDP52209 483 aa14.74□□□□□ -0.05
HMGA1-206ENST00000478214 IRF8Q02556 426 aa14.74□□□□□ -0.05
HMGA1-206ENST00000478214 CHIT1Q13231 466 aa14.74□□□□□ -0.05
HMGA1-206ENST00000478214 SETDB1Q15047 1291 aa14.74□□□□□ -0.05
HMGA1-206ENST00000478214 TUBB8Q3ZCM7 444 aa14.74□□□□□ -0.05
HMGA1-206ENST00000478214 TOR1AIP1Q5JTV8 583 aa14.74□□□□□ -0.05
HMGA1-206ENST00000478214 COLEC12Q5KU26 742 aa14.74□□□□□ -0.05
HMGA1-206ENST00000478214 ADNP2Q6IQ32 1131 aa14.74□□□□□ -0.05
HMGA1-206ENST00000478214 TIFABQ6ZNK6 161 aa14.74□□□□□ -0.05
HMGA1-206ENST00000478214 ABHD13Q7L211 337 aa14.74□□□□□ -0.05
HMGA1-206ENST00000478214 PRICKLE2Q7Z3G6 844 aa14.74□□□□□ -0.05
HMGA1-206ENST00000478214 VN1R5Q7Z5H4 357 aa14.74□□□□□ -0.05
HMGA1-206ENST00000478214 GALNT16Q8N428 558 aa14.74□□□□□ -0.05
HMGA1-206ENST00000478214 TEX9Q8N6V9 391 aa14.74□□□□□ -0.05
HMGA1-206ENST00000478214 TTLQ8NG68 377 aa14.74□□□□□ -0.05
HMGA1-206ENST00000478214 CCT6BQ92526 530 aa14.74□□□□□ -0.05
HMGA1-206ENST00000478214 PTCD3Q96EY7 689 aaKnown RBP14.74□□□□□ -0.05
HMGA1-206ENST00000478214 SMIM10Q96HG1 83 aa14.74□□□□□ -0.05
HMGA1-206ENST00000478214 SCYL1Q96KG9 808 aa14.74□□□□□ -0.05
HMGA1-206ENST00000478214 EFCAB11Q9BUY7 163 aa14.74□□□□□ -0.05
HMGA1-206ENST00000478214 VN1R1Q9GZP7 353 aa14.74□□□□□ -0.05
HMGA1-206ENST00000478214 GPR83Q9NYM4 423 aa14.74□□□□□ -0.05
HMGA1-206ENST00000478214 ZNF490Q9ULM2 529 aaPredicted RBP14.74□□□□□ -0.05
HMGA1-206ENST00000478214 OR2W5A6NFC9 320 aa14.73□□□□□ -0.05
HMGA1-206ENST00000478214 ESPNB1AK53 854 aa14.73□□□□□ -0.05
HMGA1-206ENST00000478214 SUV39H1O43463 412 aa14.73□□□□□ -0.05
HMGA1-206ENST00000478214 WFS1O76024 890 aa14.73□□□□□ -0.05
HMGA1-206ENST00000478214 TBX6O95947 436 aaPredicted RBP14.73□□□□□ -0.05
HMGA1-206ENST00000478214 RBP1P09455 135 aa14.73□□□□□ -0.05
HMGA1-206ENST00000478214 COL6A2P12110 1019 aa14.73□□□□□ -0.05
HMGA1-206ENST00000478214 EPB42P16452 691 aa14.73□□□□□ -0.05
HMGA1-206ENST00000478214 CASP2P42575 452 aa14.73□□□□□ -0.05
HMGA1-206ENST00000478214 ALDH18A1P54886 795 aaKnown RBP14.73□□□□□ -0.05
HMGA1-206ENST00000478214 OLR1P78380 273 aa14.73□□□□□ -0.05
HMGA1-206ENST00000478214 EEF1A2Q05639 463 aaKnown RBP14.73□□□□□ -0.05
HMGA1-206ENST00000478214 NAA30Q147X3 362 aaPredicted RBP14.73□□□□□ -0.05
HMGA1-206ENST00000478214 TBCCQ15814 346 aa14.73□□□□□ -0.05
HMGA1-206ENST00000478214 TSNAXIP1Q2TAA8 658 aa14.73□□□□□ -0.05
HMGA1-206ENST00000478214 MINDY4Q4G0A6 757 aa14.73□□□□□ -0.05
HMGA1-206ENST00000478214 MFSD4BQ5TF39 518 aa14.73□□□□□ -0.05
HMGA1-206ENST00000478214 UBLCP1Q8WVY7 318 aaPredicted RBP14.73□□□□□ -0.05
HMGA1-206ENST00000478214 MTBPQ96DY7 904 aa14.73□□□□□ -0.05
HMGA1-206ENST00000478214 PEX11GQ96HA9 241 aa14.73□□□□□ -0.05
HMGA1-206ENST00000478214 RBCK1Q9BYM8 510 aa14.73□□□□□ -0.05
HMGA1-206ENST00000478214 PITHD1Q9GZP4 211 aaPredicted RBP14.73□□□□□ -0.05
HMGA1-206ENST00000478214 PSMC3IPQ9P2W1 217 aaPredicted RBP14.73□□□□□ -0.05
HMGA1-206ENST00000478214 XPR1Q9UBH6 696 aa14.73□□□□□ -0.05
HMGA1-206ENST00000478214 FETUBQ9UGM5 382 aa14.73□□□□□ -0.05
HMGA1-206ENST00000478214 G3BP2Q9UN86 482 aaKnown RBP14.73□□□□□ -0.05
HMGA1-206ENST00000478214 SCN3AQ9NY46 2000 aa14.72□□□□□ -0.05
HMGA1-206ENST00000478214 A0A0G2JN53 185 aa14.72□□□□□ -0.05
HMGA1-206ENST00000478214 LRIT2A6NDA9 550 aa14.72□□□□□ -0.05
HMGA1-206ENST00000478214 URADA6NGE7 173 aa14.72□□□□□ -0.05
HMGA1-206ENST00000478214 ANKDD1BA6NHY2 528 aa14.72□□□□□ -0.05
HMGA1-206ENST00000478214 CHST10O43529 356 aa14.72□□□□□ -0.05
HMGA1-206ENST00000478214 SLC28A2O43868 658 aa14.72□□□□□ -0.05
HMGA1-206ENST00000478214 CLEC3AO75596 197 aa14.72□□□□□ -0.05
HMGA1-206ENST00000478214 SIX3O95343 332 aaPredicted RBP14.72□□□□□ -0.05
HMGA1-206ENST00000478214 SHBGP04278 402 aa14.72□□□□□ -0.05
HMGA1-206ENST00000478214 GSTM2P28161 218 aa14.72□□□□□ -0.05
HMGA1-206ENST00000478214 HNRNPH1P31943 449 aaKnown RBP14.72□□□□□ -0.05
HMGA1-206ENST00000478214 SOX8P57073 446 aa14.72□□□□□ -0.05
HMGA1-206ENST00000478214 STXBP1P61764 594 aaKnown RBP14.72□□□□□ -0.05
HMGA1-206ENST00000478214 AIMP2Q13155 320 aaKnown RBP14.72□□□□□ -0.05
HMGA1-206ENST00000478214 LAPTM5Q13571 262 aa14.72□□□□□ -0.05
HMGA1-206ENST00000478214 E2F2Q14209 437 aa14.72□□□□□ -0.05
HMGA1-206ENST00000478214 MYBPC3Q14896 1274 aa14.72□□□□□ -0.05
HMGA1-206ENST00000478214 PCBP2Q15366 365 aaKnown RBP eCLIP14.72□□□□□ -0.054e-20■■□□□ 13.5
HMGA1-206ENST00000478214 PAGE2BQ5JRK9 111 aa14.72□□□□□ -0.05
HMGA1-206ENST00000478214 PARP9Q8IXQ6 854 aa14.72□□□□□ -0.05
HMGA1-206ENST00000478214 PTGR2Q8N8N7 351 aaPredicted RBP14.72□□□□□ -0.05
HMGA1-206ENST00000478214 TEX19Q8NA77 164 aa14.72□□□□□ -0.05
HMGA1-206ENST00000478214 PHF21BQ96EK2 531 aa14.72□□□□□ -0.05
HMGA1-206ENST00000478214 VPS50Q96JG6 964 aa14.72□□□□□ -0.05
HMGA1-206ENST00000478214 RHBGQ9H310 441 aa14.72□□□□□ -0.05
HMGA1-206ENST00000478214 ZNF160Q9HCG1 818 aa14.72□□□□□ -0.05
HMGA1-206ENST00000478214 TBK1Q9UHD2 729 aa14.72□□□□□ -0.05
HMGA1-206ENST00000478214 ANGPTL3Q9Y5C1 460 aa14.72□□□□□ -0.05
HMGA1-206ENST00000478214 IQANK1A0A1B0GTG1 560 aa14.71□□□□□ -0.05
HMGA1-206ENST00000478214 ERI3O43414 337 aaKnown RBP14.71□□□□□ -0.05
HMGA1-206ENST00000478214 CDC123O75794 336 aaPredicted RBP14.71□□□□□ -0.05
HMGA1-206ENST00000478214 SLU7O95391 586 aaKnown RBP14.71□□□□□ -0.05
HMGA1-206ENST00000478214 HPP00738 406 aa14.71□□□□□ -0.05
HMGA1-206ENST00000478214 C8orf89P0DMQ9 161 aa14.71□□□□□ -0.05
HMGA1-206ENST00000478214 COX6A1P12074 109 aa14.71□□□□□ -0.05
HMGA1-206ENST00000478214 PLA2G2AP14555 144 aa14.71□□□□□ -0.05
HMGA1-206ENST00000478214 ITGA3P26006 1051 aa14.71□□□□□ -0.05
HMGA1-206ENST00000478214 EEF1DP29692 281 aaKnown RBP14.71□□□□□ -0.05
HMGA1-206ENST00000478214 VSNL1P62760 191 aa14.71□□□□□ -0.05
HMGA1-206ENST00000478214 SKP1P63208 163 aa14.71□□□□□ -0.05
HMGA1-206ENST00000478214 PCDH1Q08174 1060 aa14.71□□□□□ -0.05
HMGA1-206ENST00000478214 Q0VFX4 171 aa14.71□□□□□ -0.05
HMGA1-206ENST00000478214 KLRB1Q12918 225 aa14.71□□□□□ -0.05
HMGA1-206ENST00000478214 HIST2H2ACQ16777 129 aaPredicted RBP14.71□□□□□ -0.05
HMGA1-206ENST00000478214 HIST2H2AA3Q6FI13 130 aa14.71□□□□□ -0.05
HMGA1-206ENST00000478214 NIPAL1Q6NVV3 410 aa14.71□□□□□ -0.05
HMGA1-206ENST00000478214 TMEM205Q6UW68 189 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 194.8 ms