RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 CHD2O14647 1828 aaKnown RBP3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 ASTN2O75129 1339 aaPredicted RBP3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 ADGRF5Q8IZF2 1346 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 NRCAMQ92823 1304 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 PCDH11XQ9BZA7 1347 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 PCDH11YQ9BZA8 1340 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 LRPPRCP42704 1394 aaKnown RBP3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 MSH6P52701 1360 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 ADAMTS13Q76LX8 1427 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 AHDC1Q5TGY3 1603 aaPredicted RBP3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 TRGV11A0A075B6L2 103 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 A0A087WZ62 844 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 A0A0G2JLW4 131 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 A0A0U1RQJ8 604 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 A0A1B0GUH1 482 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 A0A1W2PPV4 95 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 GSTTP1A0A1W2PQM5 241 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 GAGE10A6NGK3 116 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 ARHGAP42A6NI28 874 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 ZNF98A6NK75 572 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 TRPC5OSA6NMA1 111 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 YDJCA8MPS7 323 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 A8MX80 341 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 KCNJ18B7U540 433 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 E7ENQ6 273 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 E7ENX8 843 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 SNAP23O00161 211 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 CLDN4O14493 209 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 HS3ST1O14792 307 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 LDLRAD4O15165 306 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 KLK8O60259 260 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 MAGEC1O60732 1142 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 SNNO75324 88 aaPredicted RBP3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 TULP3O75386 442 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 SAP30O75446 220 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 CSDE1O75534 798 aaKnown RBP3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 NDUFB10O96000 172 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 IFNA6P05013 189 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 OR2T7P0C7T2 308 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 KITP10721 976 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 EGR2P11161 476 aaPredicted RBP3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 ITGAMP11215 1152 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 ICAM2P13598 275 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 CCNB1P14635 433 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 EGR1P18146 543 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 TNNI1P19237 187 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 CMA1P23946 247 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 RYKP34925 604 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 GGT5P36269 586 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 EIF2S3P41091 472 aaKnown RBP3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 P2RY2P41231 377 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 AVPR1BP47901 424 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 ALDH3B2P48448 385 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 CARSP49589 748 aaKnown RBP3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 TOB1P50616 345 aaPredicted RBP3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 P2RY4P51582 365 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 CCR4P51679 360 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 STAT2P52630 851 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 RIDAP52758 137 aaKnown RBP3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 CEBPGP53567 150 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 WNT3P56703 355 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 NUP107P57740 925 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 AP1S1P61966 158 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 RPS7P62081 194 aaKnown RBP3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 ARF6P62330 175 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 RPL10AP62906 217 aaKnown RBP3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 FPGSQ05932 587 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 TCF15Q12870 199 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 PRKAA1Q13131 559 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 EIF4EBP2Q13542 120 aaPredicted RBP3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 KCNJ12Q14500 433 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 IL11RAQ14626 422 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 MVPQ14764 893 aaKnown RBP3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 PDK2Q15119 407 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 NPTX1Q15818 432 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 UAP1Q16222 522 aaPredicted RBP3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 SSX2Q16385 188 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 PCK2Q16822 640 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 AP5B1Q2VPB7 878 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 CHRFAM7AQ494W8 412 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 PDLIM3Q53GG5 364 aaPredicted RBP3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 LACTB2Q53H82 288 aaPredicted RBP3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 CRB2Q5IJ48 1285 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 PHYHD1Q5SRE7 291 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 HES5Q5TA89 166 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 LIPNQ5VXI9 398 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 SP5Q6BEB4 398 aaPredicted RBP3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 SULT1C3Q6IMI6 304 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 MRNIPQ6NTE8 343 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 C4orf22Q6V702 233 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 NPSR1Q6W5P4 371 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 SLC39A5Q6ZMH5 540 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 ZNF627Q7L945 461 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 TRPM8Q7Z2W7 1104 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 PAGE2Q7Z2X7 111 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 TRMT11Q7Z4G4 463 aaKnown RBP3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 LHFPL4Q7Z7J7 247 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 CUZD1Q86UP6 607 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 PLA2G4DQ86XP0 818 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms