RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 CUL3Q13618 768 aa15.41■□□□□ 0.06
VHL-203ENST00000477538 ADPRMQ3LIE5 342 aa15.41■□□□□ 0.06
VHL-203ENST00000477538 TMEM35AQ53FP2 167 aa15.41■□□□□ 0.06
VHL-203ENST00000477538 XKR7Q5GH72 579 aa15.41■□□□□ 0.06
VHL-203ENST00000477538 DEPDC1Q5TB30 811 aa15.41■□□□□ 0.06
VHL-203ENST00000477538 FOXR1Q6PIV2 292 aa15.41■□□□□ 0.06
VHL-203ENST00000477538 OR2T11Q8NH01 316 aa15.41■□□□□ 0.06
VHL-203ENST00000477538 ZCCHC10Q8TBK6 192 aa15.41■□□□□ 0.06
VHL-203ENST00000477538 GAL3ST3Q96A11 431 aa15.41■□□□□ 0.06
VHL-203ENST00000477538 MS4A6EQ96DS6 147 aa15.41■□□□□ 0.06
VHL-203ENST00000477538 THOC1Q96FV9 657 aaKnown RBP15.41■□□□□ 0.06
VHL-203ENST00000477538 C3orf30Q96M34 536 aa15.41■□□□□ 0.06
VHL-203ENST00000477538 CTRCQ99895 268 aa15.41■□□□□ 0.06
VHL-203ENST00000477538 CENPKQ9BS16 269 aa15.41■□□□□ 0.06
VHL-203ENST00000477538 REXO4Q9GZR2 422 aaKnown RBP15.41■□□□□ 0.06
VHL-203ENST00000477538 KLHL31Q9H511 634 aa15.41■□□□□ 0.06
VHL-203ENST00000477538 MEAF6Q9HAF1 191 aa15.41■□□□□ 0.06
VHL-203ENST00000477538 NPHS2Q9NP85 383 aa15.41■□□□□ 0.06
VHL-203ENST00000477538 NMRK1Q9NWW6 199 aa15.41■□□□□ 0.06
VHL-203ENST00000477538 VPS29Q9UBQ0 182 aa15.41■□□□□ 0.06
VHL-203ENST00000477538 SATB2Q9UPW6 733 aa15.41■□□□□ 0.06
VHL-203ENST00000477538 A0A1W2PNU3 283 aaPredicted RBP15.4■□□□□ 0.06
VHL-203ENST00000477538 HYKKA2RU49 373 aa15.4■□□□□ 0.06
VHL-203ENST00000477538 PMS2P1A4D2B8 440 aa15.4■□□□□ 0.06
VHL-203ENST00000477538 GMNCA6NCL1 334 aa15.4■□□□□ 0.06
VHL-203ENST00000477538 SAP18O00422 153 aaKnown RBP15.4■□□□□ 0.06
VHL-203ENST00000477538 ZNF195O14628 629 aa15.4■□□□□ 0.06
VHL-203ENST00000477538 ERI3O43414 337 aaKnown RBP15.4■□□□□ 0.06
VHL-203ENST00000477538 ZNF888P0CJ79 500 aaPredicted RBP15.4■□□□□ 0.06
VHL-203ENST00000477538 ALOX15P16050 662 aaPredicted RBP15.4■□□□□ 0.06
VHL-203ENST00000477538 RAP1GDS1P52306 607 aa15.4■□□□□ 0.06
VHL-203ENST00000477538 RAB15P59190 212 aa15.4■□□□□ 0.06
VHL-203ENST00000477538 NR6A1Q15406 480 aa15.4■□□□□ 0.06
VHL-203ENST00000477538 NDUFA9Q16795 377 aa15.4■□□□□ 0.06
VHL-203ENST00000477538 VWA5B1Q5TIE3 1220 aa15.4■□□□□ 0.06
VHL-203ENST00000477538 GARNL3Q5VVW2 1013 aa15.4■□□□□ 0.06
VHL-203ENST00000477538 CGB2Q6NT52 195 aa15.4■□□□□ 0.06
VHL-203ENST00000477538 TMEM214Q6NUQ4 689 aaKnown RBP15.4■□□□□ 0.06
VHL-203ENST00000477538 TRIM40Q6P9F5 258 aa15.4■□□□□ 0.06
VHL-203ENST00000477538 CEACAM20Q6UY09 585 aa15.4■□□□□ 0.06
VHL-203ENST00000477538 Q6ZSR9 355 aa15.4■□□□□ 0.06
VHL-203ENST00000477538 MAVSQ7Z434 540 aa15.4■□□□□ 0.06
VHL-203ENST00000477538 MARCH9Q86YJ5 346 aa15.4■□□□□ 0.06
VHL-203ENST00000477538 TMEM126BQ8IUX1 230 aa15.4■□□□□ 0.06
VHL-203ENST00000477538 ARHGEF39Q8N4T4 335 aa15.4■□□□□ 0.06
VHL-203ENST00000477538 OR2L5Q8NG80 312 aa15.4■□□□□ 0.06
VHL-203ENST00000477538 UTP15Q8TED0 518 aaKnown RBP15.4■□□□□ 0.06
VHL-203ENST00000477538 RGMAQ96B86 450 aa15.4■□□□□ 0.06
VHL-203ENST00000477538 C10orf90Q96M02 699 aa15.4■□□□□ 0.06
VHL-203ENST00000477538 MRPL1Q9BYD6 325 aaKnown RBP15.4■□□□□ 0.06
VHL-203ENST00000477538 TRIM55Q9BYV6 548 aa15.4■□□□□ 0.06
VHL-203ENST00000477538 NSRP1Q9H0G5 558 aaKnown RBP15.4■□□□□ 0.06
VHL-203ENST00000477538 RIC8BQ9NVN3 520 aa15.4■□□□□ 0.06
VHL-203ENST00000477538 MRPS2Q9Y399 296 aaKnown RBP15.4■□□□□ 0.06
VHL-203ENST00000477538 CCL27Q9Y4X3 112 aa15.4■□□□□ 0.06
VHL-203ENST00000477538 ATP6AP2A0A1C7CYW4 349 aa15.39■□□□□ 0.05
VHL-203ENST00000477538 C4orf51C9J302 202 aa15.39■□□□□ 0.05
VHL-203ENST00000477538 PLPP1O14494 284 aa15.39■□□□□ 0.05
VHL-203ENST00000477538 SDHDO14521 159 aa15.39■□□□□ 0.05
VHL-203ENST00000477538 ZNF749O43361 778 aa15.39■□□□□ 0.05
VHL-203ENST00000477538 SHOX2O60902 331 aaPredicted RBP15.39■□□□□ 0.05
VHL-203ENST00000477538 SCRG1O75711 98 aa15.39■□□□□ 0.05
VHL-203ENST00000477538 ATP6AP2O75787 350 aa15.39■□□□□ 0.05
VHL-203ENST00000477538 RSL1D1O76021 490 aaKnown RBP15.39■□□□□ 0.05
VHL-203ENST00000477538 SEMA3DO95025 777 aa15.39■□□□□ 0.05
VHL-203ENST00000477538 TIAF1O95411 115 aa15.39■□□□□ 0.05
VHL-203ENST00000477538 GCGRP47871 477 aa15.39■□□□□ 0.05
VHL-203ENST00000477538 PLA2G16P53816 162 aa15.39■□□□□ 0.05
VHL-203ENST00000477538 ARSFP54793 590 aa15.39■□□□□ 0.05
VHL-203ENST00000477538 EMP3P54852 163 aa15.39■□□□□ 0.05
VHL-203ENST00000477538 AQP5P55064 265 aa15.39■□□□□ 0.05
VHL-203ENST00000477538 RAB8AP61006 207 aa15.39■□□□□ 0.05
VHL-203ENST00000477538 TGM3Q08188 693 aa15.39■□□□□ 0.05
VHL-203ENST00000477538 MUM1Q2TAK8 710 aa15.39■□□□□ 0.05
VHL-203ENST00000477538 FAM214AQ32MH5 1076 aa15.39■□□□□ 0.05
VHL-203ENST00000477538 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.39■□□□□ 0.05
VHL-203ENST00000477538 SPDYAQ5MJ70 313 aa15.39■□□□□ 0.05
VHL-203ENST00000477538 DCAF12Q5T6F0 453 aa15.39■□□□□ 0.05
VHL-203ENST00000477538 PRAMEF17Q5VTA0 474 aa15.39■□□□□ 0.05
VHL-203ENST00000477538 YOD1Q5VVQ6 348 aaPredicted RBP15.39■□□□□ 0.05
VHL-203ENST00000477538 PWWP2BQ6NUJ5 590 aa15.39■□□□□ 0.05
VHL-203ENST00000477538 ABHD13Q7L211 337 aa15.39■□□□□ 0.05
VHL-203ENST00000477538 SRFBP1Q8NEF9 429 aaKnown RBP15.39■□□□□ 0.05
VHL-203ENST00000477538 TUBGCP3Q96CW5 907 aa15.39■□□□□ 0.05
VHL-203ENST00000477538 TAAR9Q96RI9 348 aa15.39■□□□□ 0.05
VHL-203ENST00000477538 C17orf62Q9BQA9 187 aa15.39■□□□□ 0.05
VHL-203ENST00000477538 SIKE1Q9BRV8 207 aa15.39■□□□□ 0.05
VHL-203ENST00000477538 NDC1Q9BTX1 674 aa15.39■□□□□ 0.05
VHL-203ENST00000477538 SLC7A5P2Q9GIP4 190 aa15.39■□□□□ 0.05
VHL-203ENST00000477538 FAM107BQ9H098 131 aa15.39■□□□□ 0.05
VHL-203ENST00000477538 CUTCQ9NTM9 273 aa15.39■□□□□ 0.05
VHL-203ENST00000477538 SRPK3Q9UPE1 567 aa15.39■□□□□ 0.05
VHL-203ENST00000477538 SLC22A7Q9Y694 548 aa15.39■□□□□ 0.05
VHL-203ENST00000477538 A0A0G2JN53 185 aa15.38■□□□□ 0.05
VHL-203ENST00000477538 GOLGA8QA0A0J9YX86 632 aa15.38■□□□□ 0.05
VHL-203ENST00000477538 GOLGA8OA6NCC3 632 aa15.38■□□□□ 0.05
VHL-203ENST00000477538 NPIPB8E9PQR5 432 aa15.38■□□□□ 0.05
VHL-203ENST00000477538 GOLGA8NF8WBI6 632 aa15.38■□□□□ 0.05
VHL-203ENST00000477538 LSM1O15116 133 aaKnown RBP15.38■□□□□ 0.05
VHL-203ENST00000477538 DIAPH2O60879 1101 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms