RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 DNAJB6O75190 326 aa10.61□□□□□ -0.71
BRCA1-213ENST00000476777 SYF2O95926 243 aaKnown RBP10.61□□□□□ -0.71
BRCA1-213ENST00000476777 ESR1P03372 595 aa10.61□□□□□ -0.71
BRCA1-213ENST00000476777 PTMAP06454 111 aaKnown RBP10.61□□□□□ -0.71
BRCA1-213ENST00000476777 GLI4P10075 376 aa10.61□□□□□ -0.71
BRCA1-213ENST00000476777 ACVR2AP27037 513 aa10.61□□□□□ -0.71
BRCA1-213ENST00000476777 NMBRP28336 390 aa10.61□□□□□ -0.71
BRCA1-213ENST00000476777 STIP1P31948 543 aaKnown RBP10.61□□□□□ -0.71
BRCA1-213ENST00000476777 COILP38432 576 aaPredicted RBP10.61□□□□□ -0.71
BRCA1-213ENST00000476777 ZFP36L2P47974 494 aaKnown RBP10.61□□□□□ -0.71
BRCA1-213ENST00000476777 DGKQP52824 942 aa10.61□□□□□ -0.71
BRCA1-213ENST00000476777 ADARP55265 1226 aaKnown RBP10.61□□□□□ -0.71
BRCA1-213ENST00000476777 CRADDP78560 199 aa10.61□□□□□ -0.71
BRCA1-213ENST00000476777 TYSND1Q2T9J0 566 aa10.61□□□□□ -0.71
BRCA1-213ENST00000476777 ASPGQ86U10 573 aa10.61□□□□□ -0.71
BRCA1-213ENST00000476777 SLC26A11Q86WA9 606 aa10.61□□□□□ -0.71
BRCA1-213ENST00000476777 CYP4X1Q8N118 509 aa10.61□□□□□ -0.71
BRCA1-213ENST00000476777 CYP4Z2PQ8N1L4 340 aa10.61□□□□□ -0.71
BRCA1-213ENST00000476777 AFAP1L2Q8N4X5 818 aa10.61□□□□□ -0.71
BRCA1-213ENST00000476777 OTUD6BQ8N6M0 293 aa10.61□□□□□ -0.71
BRCA1-213ENST00000476777 LRRC57Q8N9N7 239 aa10.61□□□□□ -0.71
BRCA1-213ENST00000476777 NFAM1Q8NET5 270 aaPredicted RBP10.61□□□□□ -0.71
BRCA1-213ENST00000476777 WFDC11Q8NEX6 87 aa10.61□□□□□ -0.71
BRCA1-213ENST00000476777 OR10Q1Q8NGQ4 319 aa10.61□□□□□ -0.71
BRCA1-213ENST00000476777 SLC13A3Q8WWT9 602 aa10.61□□□□□ -0.71
BRCA1-213ENST00000476777 ASB11Q8WXH4 323 aa10.61□□□□□ -0.71
BRCA1-213ENST00000476777 TBC1D20Q96BZ9 403 aa10.61□□□□□ -0.71
BRCA1-213ENST00000476777 PWWP2AQ96N64 755 aa10.61□□□□□ -0.71
BRCA1-213ENST00000476777 PANX2Q96RD6 677 aa10.61□□□□□ -0.71
BRCA1-213ENST00000476777 MDFIQ99750 246 aa10.61□□□□□ -0.71
BRCA1-213ENST00000476777 TTYH2Q9BSA4 534 aa10.61□□□□□ -0.71
BRCA1-213ENST00000476777 DEPPQ9NTK1 212 aa10.61□□□□□ -0.71
BRCA1-213ENST00000476777 Q9UFV3 132 aa10.61□□□□□ -0.71
BRCA1-213ENST00000476777 EDARQ9UNE0 448 aa10.61□□□□□ -0.71
BRCA1-213ENST00000476777 SH2B3Q9UQQ2 575 aa10.61□□□□□ -0.71
BRCA1-213ENST00000476777 CRYL1Q9Y2S2 319 aa10.61□□□□□ -0.71
BRCA1-213ENST00000476777 FAM215AQ9Y5M1 114 aa10.61□□□□□ -0.71
BRCA1-213ENST00000476777 DUSP10Q9Y6W6 482 aa10.61□□□□□ -0.71
BRCA1-213ENST00000476777 EML6Q6ZMW3 1958 aa10.6□□□□□ -0.71
BRCA1-213ENST00000476777 AKR1B15C9JRZ8 316 aaPredicted RBP10.6□□□□□ -0.71
BRCA1-213ENST00000476777 GOLGA8KD6RF30 607 aa10.6□□□□□ -0.71
BRCA1-213ENST00000476777 GOLGA8TH3BQL2 631 aa10.6□□□□□ -0.71
BRCA1-213ENST00000476777 GFYI3L273 518 aa10.6□□□□□ -0.71
BRCA1-213ENST00000476777 B4GALT2O60909 372 aa10.6□□□□□ -0.71
BRCA1-213ENST00000476777 APRTP07741 180 aa10.6□□□□□ -0.71
BRCA1-213ENST00000476777 IMPA1P29218 277 aa10.6□□□□□ -0.71
BRCA1-213ENST00000476777 ADH7P40394 386 aa10.6□□□□□ -0.71
BRCA1-213ENST00000476777 SKIV2L2P42285 1042 aaKnown RBP10.6□□□□□ -0.71
BRCA1-213ENST00000476777 KIR2DL3P43628 341 aa10.6□□□□□ -0.71
BRCA1-213ENST00000476777 CLCN7P51798 805 aa10.6□□□□□ -0.71
BRCA1-213ENST00000476777 SESN2P58004 480 aaPredicted RBP10.6□□□□□ -0.71
BRCA1-213ENST00000476777 HERC3Q15034 1050 aa10.6□□□□□ -0.71
BRCA1-213ENST00000476777 RPS6KA1Q15418 735 aa10.6□□□□□ -0.71
BRCA1-213ENST00000476777 SPA17Q15506 151 aa10.6□□□□□ -0.71
BRCA1-213ENST00000476777 SLC25A35Q3KQZ1 300 aa10.6□□□□□ -0.71
BRCA1-213ENST00000476777 RNF187Q5TA31 235 aaPredicted RBP10.6□□□□□ -0.71
BRCA1-213ENST00000476777 RTL6Q6ICC9 239 aa10.6□□□□□ -0.71
BRCA1-213ENST00000476777 CAPN13Q6MZZ7 669 aaPredicted RBP10.6□□□□□ -0.71
BRCA1-213ENST00000476777 PAOXQ6QHF9 649 aa10.6□□□□□ -0.71
BRCA1-213ENST00000476777 B3GNT6Q6ZMB0 384 aa10.6□□□□□ -0.71
BRCA1-213ENST00000476777 TAOK1Q7L7X3 1001 aa10.6□□□□□ -0.71
BRCA1-213ENST00000476777 CAMKMTQ7Z624 323 aa10.6□□□□□ -0.71
BRCA1-213ENST00000476777 PRUNE1Q86TP1 453 aa10.6□□□□□ -0.71
BRCA1-213ENST00000476777 CDC20BQ86Y33 519 aa10.6□□□□□ -0.71
BRCA1-213ENST00000476777 OR5M9Q8NGP3 310 aa10.6□□□□□ -0.71
BRCA1-213ENST00000476777 ATG4AQ8WYN0 398 aa10.6□□□□□ -0.71
BRCA1-213ENST00000476777 ARSGQ96EG1 525 aa10.6□□□□□ -0.71
BRCA1-213ENST00000476777 CALR3Q96L12 384 aaKnown RBP10.6□□□□□ -0.71
BRCA1-213ENST00000476777 PTCHD1Q96NR3 888 aa10.6□□□□□ -0.71
BRCA1-213ENST00000476777 SLC30A3Q99726 388 aa10.6□□□□□ -0.71
BRCA1-213ENST00000476777 DEFB126Q9BYW3 111 aa10.6□□□□□ -0.71
BRCA1-213ENST00000476777 ZDHHC11Q9H8X9 412 aa10.6□□□□□ -0.71
BRCA1-213ENST00000476777 RAB6BQ9NRW1 208 aa10.6□□□□□ -0.71
BRCA1-213ENST00000476777 CRIM1Q9NZV1 1036 aa10.6□□□□□ -0.71
BRCA1-213ENST00000476777 IGKV3D-11A0A0A0MRZ8 115 aa10.59□□□□□ -0.71
BRCA1-213ENST00000476777 PINLYPA6NC86 204 aa10.59□□□□□ -0.71
BRCA1-213ENST00000476777 OR14I1A6ND48 311 aa10.59□□□□□ -0.71
BRCA1-213ENST00000476777 FIGNL2A6NMB9 653 aa10.59□□□□□ -0.71
BRCA1-213ENST00000476777 A6NNC1 897 aa10.59□□□□□ -0.71
BRCA1-213ENST00000476777 CHST10O43529 356 aa10.59□□□□□ -0.71
BRCA1-213ENST00000476777 GALR3O60755 368 aaPredicted RBP10.59□□□□□ -0.71
BRCA1-213ENST00000476777 VAPBO95292 243 aa10.59□□□□□ -0.71
BRCA1-213ENST00000476777 IFNB1P01574 187 aa10.59□□□□□ -0.71
BRCA1-213ENST00000476777 TUBB4AP04350 444 aa10.59□□□□□ -0.71
BRCA1-213ENST00000476777 ETS1P14921 441 aa10.59□□□□□ -0.71
BRCA1-213ENST00000476777 JAK1P23458 1154 aa10.59□□□□□ -0.71
BRCA1-213ENST00000476777 NAP1L1P55209 391 aaKnown RBP10.59□□□□□ -0.71
BRCA1-213ENST00000476777 TBPL1P62380 186 aa10.59□□□□□ -0.71
BRCA1-213ENST00000476777 PPIAP62937 165 aaKnown RBP10.59□□□□□ -0.71
BRCA1-213ENST00000476777 OLR1P78380 273 aa10.59□□□□□ -0.71
BRCA1-213ENST00000476777 BTG2P78543 158 aa10.59□□□□□ -0.71
BRCA1-213ENST00000476777 MEF2AQ02078 507 aaPredicted RBP10.59□□□□□ -0.71
BRCA1-213ENST00000476777 TBX2Q13207 712 aaPredicted RBP10.59□□□□□ -0.71
BRCA1-213ENST00000476777 OASLQ15646 514 aaKnown RBP10.59□□□□□ -0.71
BRCA1-213ENST00000476777 TMEM198Q66K66 360 aa10.59□□□□□ -0.71
BRCA1-213ENST00000476777 MRNIPQ6NTE8 343 aa10.59□□□□□ -0.71
BRCA1-213ENST00000476777 ZNF585AQ6P3V2 769 aa10.59□□□□□ -0.71
BRCA1-213ENST00000476777 PAMR1Q6UXH9 720 aa10.59□□□□□ -0.71
BRCA1-213ENST00000476777 QSOX2Q6ZRP7 698 aa10.59□□□□□ -0.71
BRCA1-213ENST00000476777 KIAA0408Q6ZU52 694 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms