RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 SPP1P10451 314 aa5.16□□□□□ -1.58
SMC5-203ENST00000475540 IL10RBQ08334 325 aa5.16□□□□□ -1.58
SMC5-203ENST00000475540 CD300CQ08708 224 aa5.16□□□□□ -1.58
SMC5-203ENST00000475540 FCHO2Q0JRZ9 810 aa5.16□□□□□ -1.58
SMC5-203ENST00000475540 FAM166AQ6J272 317 aa5.16□□□□□ -1.58
SMC5-203ENST00000475540 SUSD1Q6UWL2 747 aa5.16□□□□□ -1.58
SMC5-203ENST00000475540 SLC22A15Q8IZD6 547 aa5.16□□□□□ -1.58
SMC5-203ENST00000475540 CASP10Q92851 521 aa5.16□□□□□ -1.58
SMC5-203ENST00000475540 RBM41Q96IZ5 413 aaKnown RBP5.16□□□□□ -1.58
SMC5-203ENST00000475540 FER1L6-AS2Q96M78 137 aa5.16□□□□□ -1.58
SMC5-203ENST00000475540 JAKMIP1Q96N16 626 aaKnown RBP5.16□□□□□ -1.58
SMC5-203ENST00000475540 RPP25Q9BUL9 199 aaKnown RBP5.16□□□□□ -1.58
SMC5-203ENST00000475540 PUS3Q9BZE2 481 aaKnown RBP5.16□□□□□ -1.58
SMC5-203ENST00000475540 PHPT1Q9NRX4 125 aaPredicted RBP5.16□□□□□ -1.58
SMC5-203ENST00000475540 EXOC1Q9NV70 894 aa5.16□□□□□ -1.58
SMC5-203ENST00000475540 AGTPBP1Q9UPW5 1226 aa5.16□□□□□ -1.58
SMC5-203ENST00000475540 RNF123Q5XPI4 1314 aa5.16□□□□□ -1.58
SMC5-203ENST00000475540 TRIM64A6NGJ6 449 aa5.15□□□□□ -1.59
SMC5-203ENST00000475540 TRIM64BA6NI03 449 aa5.15□□□□□ -1.59
SMC5-203ENST00000475540 NKX6-3A6NJ46 265 aa5.15□□□□□ -1.59
SMC5-203ENST00000475540 ACOD1A6NK06 481 aa5.15□□□□□ -1.59
SMC5-203ENST00000475540 KRTAP9-6A8MVA2 160 aa5.15□□□□□ -1.59
SMC5-203ENST00000475540 MTRF1O75570 445 aaKnown RBP5.15□□□□□ -1.59
SMC5-203ENST00000475540 ATP6V1B1P15313 513 aa5.15□□□□□ -1.59
SMC5-203ENST00000475540 PTAFRP25105 342 aa5.15□□□□□ -1.59
SMC5-203ENST00000475540 KRTAP5-9P26371 169 aa5.15□□□□□ -1.59
SMC5-203ENST00000475540 PIK3R1P27986 724 aa5.15□□□□□ -1.59
SMC5-203ENST00000475540 HOXC13P31276 330 aa5.15□□□□□ -1.59
SMC5-203ENST00000475540 KRT2P35908 639 aa5.15□□□□□ -1.59
SMC5-203ENST00000475540 CDX1P47902 265 aaPredicted RBP5.15□□□□□ -1.59
SMC5-203ENST00000475540 TNK1Q13470 666 aa5.15□□□□□ -1.59
SMC5-203ENST00000475540 SPOUT1Q5T280 376 aaKnown RBP5.15□□□□□ -1.59
SMC5-203ENST00000475540 MOXD1Q6UVY6 613 aa5.15□□□□□ -1.59
SMC5-203ENST00000475540 MACC1Q6ZN28 852 aa5.15□□□□□ -1.59
SMC5-203ENST00000475540 FAM47EQ6ZV65 393 aa5.15□□□□□ -1.59
SMC5-203ENST00000475540 SLFN11Q7Z7L1 901 aa5.15□□□□□ -1.59
SMC5-203ENST00000475540 SLC47A2Q86VL8 602 aa5.15□□□□□ -1.59
SMC5-203ENST00000475540 ARL10Q8N8L6 244 aa5.15□□□□□ -1.59
SMC5-203ENST00000475540 RPLP0P6Q8NHW5 317 aa5.15□□□□□ -1.59
SMC5-203ENST00000475540 AK8Q96MA6 479 aa5.15□□□□□ -1.59
SMC5-203ENST00000475540 DBNDD1Q9H9R9 158 aa5.15□□□□□ -1.59
SMC5-203ENST00000475540 GNB4Q9HAV0 340 aa5.15□□□□□ -1.59
SMC5-203ENST00000475540 GTF3C4Q9UKN8 822 aa5.15□□□□□ -1.59
SMC5-203ENST00000475540 RUVBL2Q9Y230 463 aaKnown RBP5.15□□□□□ -1.59
SMC5-203ENST00000475540 IGLV4-3A0A075B6K6 122 aa5.14□□□□□ -1.59
SMC5-203ENST00000475540 TRAV18A0A075B6X5 111 aa5.14□□□□□ -1.59
SMC5-203ENST00000475540 RTCAO00442 366 aaKnown RBP5.14□□□□□ -1.59
SMC5-203ENST00000475540 MAGEB2O15479 319 aa5.14□□□□□ -1.59
SMC5-203ENST00000475540 ECE2O60344 883 aa5.14□□□□□ -1.59
SMC5-203ENST00000475540 RPLP0P05388 317 aaKnown RBP5.14□□□□□ -1.59
SMC5-203ENST00000475540 PTMAP06454 111 aaKnown RBP5.14□□□□□ -1.59
SMC5-203ENST00000475540 PDGFRAP16234 1089 aa5.14□□□□□ -1.59
SMC5-203ENST00000475540 EDNRAP25101 427 aa5.14□□□□□ -1.59
SMC5-203ENST00000475540 ATP5DP30049 168 aa5.14□□□□□ -1.59
SMC5-203ENST00000475540 GPR183P32249 361 aa5.14□□□□□ -1.59
SMC5-203ENST00000475540 TFCP2Q12800 502 aa5.14□□□□□ -1.59
SMC5-203ENST00000475540 TAZQ16635 292 aa5.14□□□□□ -1.59
SMC5-203ENST00000475540 HIGD2BQ4VC39 106 aa5.14□□□□□ -1.59
SMC5-203ENST00000475540 CROCCP3Q8IVE0 287 aa5.14□□□□□ -1.59
SMC5-203ENST00000475540 APCDD1Q8J025 514 aa5.14□□□□□ -1.59
SMC5-203ENST00000475540 OR8H3Q8N146 312 aa5.14□□□□□ -1.59
SMC5-203ENST00000475540 SLC39A11Q8N1S5 342 aa5.14□□□□□ -1.59
SMC5-203ENST00000475540 GOT1L1Q8NHS2 421 aaPredicted RBP5.14□□□□□ -1.59
SMC5-203ENST00000475540 RAD54LQ92698 747 aa5.14□□□□□ -1.59
SMC5-203ENST00000475540 PSMB7Q99436 277 aa5.14□□□□□ -1.59
SMC5-203ENST00000475540 ATF6BQ99941 703 aa5.14□□□□□ -1.59
SMC5-203ENST00000475540 C10orf88Q9H8K7 445 aa5.14□□□□□ -1.59
SMC5-203ENST00000475540 GTSE1Q9NYZ3 720 aa5.14□□□□□ -1.59
SMC5-203ENST00000475540 RARRES3Q9UL19 164 aa5.14□□□□□ -1.59
SMC5-203ENST00000475540 ISY1Q9ULR0 285 aaKnown RBP5.14□□□□□ -1.59
SMC5-203ENST00000475540 RNF103O00237 685 aa5.13□□□□□ -1.59
SMC5-203ENST00000475540 PGLSO95336 258 aa5.13□□□□□ -1.59
SMC5-203ENST00000475540 C9P02748 559 aa5.13□□□□□ -1.59
SMC5-203ENST00000475540 ITIH1P19827 911 aa5.13□□□□□ -1.59
SMC5-203ENST00000475540 C4BPBP20851 252 aa5.13□□□□□ -1.59
SMC5-203ENST00000475540 GIFP27352 417 aa5.13□□□□□ -1.59
SMC5-203ENST00000475540 PKLRP30613 574 aa5.13□□□□□ -1.59
SMC5-203ENST00000475540 SSTR1P30872 391 aa5.13□□□□□ -1.59
SMC5-203ENST00000475540 ZNF41P51814 821 aaPredicted RBP5.13□□□□□ -1.59
SMC5-203ENST00000475540 NDST2P52849 883 aa5.13□□□□□ -1.59
SMC5-203ENST00000475540 BFSP1Q12934 665 aa5.13□□□□□ -1.59
SMC5-203ENST00000475540 KIAA0141Q14154 515 aaPredicted RBP5.13□□□□□ -1.59
SMC5-203ENST00000475540 ZNF146Q15072 292 aa5.13□□□□□ -1.59
SMC5-203ENST00000475540 ODF2Q5BJF6 829 aa5.13□□□□□ -1.59
SMC5-203ENST00000475540 SLC25A30Q5SVS4 291 aa5.13□□□□□ -1.59
SMC5-203ENST00000475540 FAM182AQ5T1J6 154 aa5.13□□□□□ -1.59
SMC5-203ENST00000475540 DHRS11Q6UWP2 260 aa5.13□□□□□ -1.59
SMC5-203ENST00000475540 ZNF841Q6ZN19 808 aa5.13□□□□□ -1.59
SMC5-203ENST00000475540 SPATA21Q7Z572 469 aa5.13□□□□□ -1.59
SMC5-203ENST00000475540 DNAJB7Q7Z6W7 309 aaPredicted RBP5.13□□□□□ -1.59
SMC5-203ENST00000475540 PHLDB2Q86SQ0 1253 aa5.13□□□□□ -1.59
SMC5-203ENST00000475540 RNF130Q86XS8 419 aa5.13□□□□□ -1.59
SMC5-203ENST00000475540 CCDC185Q8N715 623 aa5.13□□□□□ -1.59
SMC5-203ENST00000475540 TOMM40LQ969M1 308 aa5.13□□□□□ -1.59
SMC5-203ENST00000475540 ZNF597Q96LX8 424 aa5.13□□□□□ -1.59
SMC5-203ENST00000475540 RAB3IPQ96QF0 476 aaPredicted RBP5.13□□□□□ -1.59
SMC5-203ENST00000475540 FERMT1Q9BQL6 677 aa5.13□□□□□ -1.59
SMC5-203ENST00000475540 KRTAP4-4Q9BYR3 166 aa5.13□□□□□ -1.59
SMC5-203ENST00000475540 RPF1Q9H9Y2 349 aaKnown RBP5.13□□□□□ -1.59
SMC5-203ENST00000475540 IARS2Q9NSE4 1012 aaKnown RBP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms