RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 RGS1Q08116 209 aa13.11□□□□□ -0.31
TRAF4-210ENST00000475329 TGM3Q08188 693 aa13.11□□□□□ -0.31
TRAF4-210ENST00000475329 CEACAM7Q14002 265 aa13.11□□□□□ -0.31
TRAF4-210ENST00000475329 ADPRMQ3LIE5 342 aa13.11□□□□□ -0.31
TRAF4-210ENST00000475329 ZNF528Q3MIS6 628 aa13.11□□□□□ -0.31
TRAF4-210ENST00000475329 SPATS1Q496A3 300 aa13.11□□□□□ -0.31
TRAF4-210ENST00000475329 C6orf10Q5SRN2 563 aa13.11□□□□□ -0.31
TRAF4-210ENST00000475329 CCNYL2Q5T2Q4 361 aa13.11□□□□□ -0.31
TRAF4-210ENST00000475329 FCRL6Q6DN72 434 aa13.11□□□□□ -0.31
TRAF4-210ENST00000475329 R3HCC1LQ7Z5L2 792 aaKnown RBP13.11□□□□□ -0.31
TRAF4-210ENST00000475329 CAMKMTQ7Z624 323 aa13.11□□□□□ -0.31
TRAF4-210ENST00000475329 RABEPKQ7Z6M1 372 aa13.11□□□□□ -0.31
TRAF4-210ENST00000475329 ASPGQ86U10 573 aa13.11□□□□□ -0.31
TRAF4-210ENST00000475329 GPR180Q86V85 440 aa13.11□□□□□ -0.31
TRAF4-210ENST00000475329 TMEM132CQ8N3T6 1108 aa13.11□□□□□ -0.31
TRAF4-210ENST00000475329 OR7A2PQ8NGA2 310 aa13.11□□□□□ -0.31
TRAF4-210ENST00000475329 OR8J2Q8NGG1 315 aa13.11□□□□□ -0.31
TRAF4-210ENST00000475329 BAHD1Q8TBE0 780 aaPredicted RBP13.11□□□□□ -0.31
TRAF4-210ENST00000475329 WDR60Q8WVS4 1066 aa13.11□□□□□ -0.31
TRAF4-210ENST00000475329 GTF2H4Q92759 462 aa13.11□□□□□ -0.31
TRAF4-210ENST00000475329 SORBS1Q9BX66 1292 aaKnown RBP13.11□□□□□ -0.31
TRAF4-210ENST00000475329 ZNF717Q9BY31 904 aaPredicted RBP13.11□□□□□ -0.31
TRAF4-210ENST00000475329 REXO4Q9GZR2 422 aaKnown RBP13.11□□□□□ -0.31
TRAF4-210ENST00000475329 REEP4Q9H6H4 257 aa13.11□□□□□ -0.31
TRAF4-210ENST00000475329 TMEM74BQ9NUR3 256 aa13.11□□□□□ -0.31
TRAF4-210ENST00000475329 EVA1BQ9NVM1 165 aa13.11□□□□□ -0.31
TRAF4-210ENST00000475329 FAM120CQ9NX05 1096 aaKnown RBP13.11□□□□□ -0.31
TRAF4-210ENST00000475329 ATP6V1HQ9UI12 483 aa13.11□□□□□ -0.31
TRAF4-210ENST00000475329 POMPQ9Y244 141 aa13.11□□□□□ -0.31
TRAF4-210ENST00000475329 MAN2B2Q9Y2E5 1009 aa13.11□□□□□ -0.31
TRAF4-210ENST00000475329 WBP11Q9Y2W2 641 aaKnown RBP13.11□□□□□ -0.31
TRAF4-210ENST00000475329 PCDH15Q96QU1 1955 aa13.11□□□□□ -0.31
TRAF4-210ENST00000475329 RHPN2P1A8MT19 583 aa13.1□□□□□ -0.31
TRAF4-210ENST00000475329 RTCAO00442 366 aaKnown RBP13.1□□□□□ -0.31
TRAF4-210ENST00000475329 NME4O00746 187 aa13.1□□□□□ -0.31
TRAF4-210ENST00000475329 STATHP02808 62 aa13.1□□□□□ -0.31
TRAF4-210ENST00000475329 GBAP04062 536 aa13.1□□□□□ -0.31
TRAF4-210ENST00000475329 SLC35G6P0C7Q6 338 aa13.1□□□□□ -0.31
TRAF4-210ENST00000475329 SLC6A2P23975 617 aa13.1□□□□□ -0.31
TRAF4-210ENST00000475329 EPHA8P29322 1005 aaPredicted RBP13.1□□□□□ -0.31
TRAF4-210ENST00000475329 SSR2P43308 183 aa13.1□□□□□ -0.31
TRAF4-210ENST00000475329 HNRNPFP52597 415 aaKnown RBP13.1□□□□□ -0.31
TRAF4-210ENST00000475329 MAPK12P53778 367 aa13.1□□□□□ -0.31
TRAF4-210ENST00000475329 EPHA4P54764 986 aa13.1□□□□□ -0.31
TRAF4-210ENST00000475329 TAS2R50P59544 299 aa13.1□□□□□ -0.31
TRAF4-210ENST00000475329 ACTR3P61158 418 aa13.1□□□□□ -0.31
TRAF4-210ENST00000475329 STXBP1P61764 594 aaKnown RBP13.1□□□□□ -0.31
TRAF4-210ENST00000475329 SHBQ15464 509 aa13.1□□□□□ -0.31
TRAF4-210ENST00000475329 CPTPQ5TA50 214 aa13.1□□□□□ -0.31
TRAF4-210ENST00000475329 OR4F3Q6IEY1 312 aa13.1□□□□□ -0.31
TRAF4-210ENST00000475329 FAM71E1Q6IPT2 247 aa13.1□□□□□ -0.31
TRAF4-210ENST00000475329 DLEU7Q6UYE1 221 aa13.1□□□□□ -0.31
TRAF4-210ENST00000475329 RNF44Q7L0R7 432 aa13.1□□□□□ -0.31
TRAF4-210ENST00000475329 ARL10Q8N8L6 244 aa13.1□□□□□ -0.31
TRAF4-210ENST00000475329 SRFBP1Q8NEF9 429 aaKnown RBP13.1□□□□□ -0.31
TRAF4-210ENST00000475329 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.1□□□□□ -0.31
TRAF4-210ENST00000475329 NT5CQ8TCD5 201 aa13.1□□□□□ -0.31
TRAF4-210ENST00000475329 STMN2Q93045 179 aa13.1□□□□□ -0.31
TRAF4-210ENST00000475329 TMEM125Q96AQ2 219 aa13.1□□□□□ -0.31
TRAF4-210ENST00000475329 MS4A6EQ96DS6 147 aa13.1□□□□□ -0.31
TRAF4-210ENST00000475329 MTERF3Q96E29 417 aa13.1□□□□□ -0.31
TRAF4-210ENST00000475329 ZFYVE21Q9BQ24 234 aa13.1□□□□□ -0.31
TRAF4-210ENST00000475329 C17orf62Q9BQA9 187 aa13.1□□□□□ -0.31
TRAF4-210ENST00000475329 DUSP26Q9BV47 211 aa13.1□□□□□ -0.31
TRAF4-210ENST00000475329 KCNH6Q9H252 994 aa13.1□□□□□ -0.31
TRAF4-210ENST00000475329 RASSF4Q9H2L5 321 aa13.1□□□□□ -0.31
TRAF4-210ENST00000475329 SEMA6CQ9H3T2 930 aa13.1□□□□□ -0.31
TRAF4-210ENST00000475329 LHX9Q9NQ69 397 aa13.1□□□□□ -0.31
TRAF4-210ENST00000475329 ATAD3AQ9NVI7 634 aa13.1□□□□□ -0.31
TRAF4-210ENST00000475329 ZSCAN32Q9NX65 697 aa13.1□□□□□ -0.31
TRAF4-210ENST00000475329 SUCOQ9UBS9 1254 aaKnown RBP13.1□□□□□ -0.31
TRAF4-210ENST00000475329 PACSIN3Q9UKS6 424 aa13.1□□□□□ -0.31
TRAF4-210ENST00000475329 L3MBTL1Q9Y468 752 aa13.1□□□□□ -0.31
TRAF4-210ENST00000475329 PCDHA9Q9Y5H5 950 aa13.1□□□□□ -0.31
TRAF4-210ENST00000475329 GOLGA4Q13439 2230 aaKnown RBP13.1□□□□□ -0.31
TRAF4-210ENST00000475329 A0A096LPI6 279 aa13.09□□□□□ -0.31
TRAF4-210ENST00000475329 YKT6O15498 198 aa13.09□□□□□ -0.31
TRAF4-210ENST00000475329 ERI3O43414 337 aaKnown RBP13.09□□□□□ -0.31
TRAF4-210ENST00000475329 GPR37L1O60883 481 aa13.09□□□□□ -0.31
TRAF4-210ENST00000475329 ENTPD5O75356 428 aa13.09□□□□□ -0.31
TRAF4-210ENST00000475329 ERN1O75460 977 aaKnown RBP13.09□□□□□ -0.31
TRAF4-210ENST00000475329 SORBS2O94875 1100 aaKnown RBP13.09□□□□□ -0.31
TRAF4-210ENST00000475329 KLHL18O94889 574 aa13.09□□□□□ -0.31
TRAF4-210ENST00000475329 LMNAP02545 664 aaKnown RBP13.09□□□□□ -0.31
TRAF4-210ENST00000475329 CFIP05156 583 aa13.09□□□□□ -0.31
TRAF4-210ENST00000475329 IL3P08700 152 aa13.09□□□□□ -0.31
TRAF4-210ENST00000475329 PVRP15151 417 aa13.09□□□□□ -0.31
TRAF4-210ENST00000475329 DDX5P17844 614 aaKnown RBP13.09□□□□□ -0.31
TRAF4-210ENST00000475329 CDH3P22223 829 aa13.09□□□□□ -0.31
TRAF4-210ENST00000475329 LSSP48449 732 aa13.09□□□□□ -0.31
TRAF4-210ENST00000475329 PPM1FP49593 454 aaPredicted RBP13.09□□□□□ -0.31
TRAF4-210ENST00000475329 EEFSECP57772 596 aaKnown RBP13.09□□□□□ -0.31
TRAF4-210ENST00000475329 PPP1CAP62136 330 aa13.09□□□□□ -0.31
TRAF4-210ENST00000475329 TRA2BP62995 288 aaKnown RBP13.09□□□□□ -0.31
TRAF4-210ENST00000475329 PHC1P78364 1004 aa13.09□□□□□ -0.31
TRAF4-210ENST00000475329 PLIN5Q00G26 463 aa13.09□□□□□ -0.31
TRAF4-210ENST00000475329 KLC1Q07866 573 aa13.09□□□□□ -0.31
TRAF4-210ENST00000475329 C2orf80Q0P641 193 aa13.09□□□□□ -0.31
TRAF4-210ENST00000475329 HYAL2Q12891 473 aa13.09□□□□□ -0.31
TRAF4-210ENST00000475329 BNIP3Q12983 259 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms