RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 RAB8AP61006 207 aa22.7■■□□□ 1.22
CPNE1-223ENST00000475146 OLR1P78380 273 aa22.7■■□□□ 1.22
CPNE1-223ENST00000475146 NIPAL1Q6NVV3 410 aa22.7■■□□□ 1.22
CPNE1-223ENST00000475146 NDUFAF7Q7L592 441 aa22.7■■□□□ 1.22
CPNE1-223ENST00000475146 RBMXL3Q8N7X1 1067 aaKnown RBP22.7■■□□□ 1.22
CPNE1-223ENST00000475146 LRRN4CLQ8ND94 238 aa22.7■■□□□ 1.22
CPNE1-223ENST00000475146 CREB3L4Q8TEY5 395 aa22.7■■□□□ 1.22
CPNE1-223ENST00000475146 TM9SF4Q92544 642 aa22.7■■□□□ 1.22
CPNE1-223ENST00000475146 LHPPQ9H008 270 aa22.7■■□□□ 1.22
CPNE1-223ENST00000475146 EHD1Q9H4M9 534 aa22.7■■□□□ 1.22
CPNE1-223ENST00000475146 PRM3Q9NNZ6 103 aa22.7■■□□□ 1.22
CPNE1-223ENST00000475146 LUZP4Q9P127 313 aa22.7■■□□□ 1.22
CPNE1-223ENST00000475146 BAHCC1Q9P281 2608 aa22.7■■□□□ 1.22
CPNE1-223ENST00000475146 BSNQ9UPA5 3926 aa22.69■■□□□ 1.22
CPNE1-223ENST00000475146 IGHV1-45A0A0A0MS14 117 aa22.69■■□□□ 1.22
CPNE1-223ENST00000475146 TTLL8A6PVC2 850 aa22.69■■□□□ 1.22
CPNE1-223ENST00000475146 KRT38O76015 456 aa22.69■■□□□ 1.22
CPNE1-223ENST00000475146 KLHL2O95198 593 aa22.69■■□□□ 1.22
CPNE1-223ENST00000475146 WISP1O95388 367 aa22.69■■□□□ 1.22
CPNE1-223ENST00000475146 EFNA3P52797 238 aa22.69■■□□□ 1.22
CPNE1-223ENST00000475146 MLLT10P55197 1068 aa22.69■■□□□ 1.22
CPNE1-223ENST00000475146 IRF8Q02556 426 aa22.69■■□□□ 1.22
CPNE1-223ENST00000475146 Q0VFX4 171 aa22.69■■□□□ 1.22
CPNE1-223ENST00000475146 RHEBL1Q8TAI7 183 aa22.69■■□□□ 1.22
CPNE1-223ENST00000475146 KLHL31Q9H511 634 aa22.69■■□□□ 1.22
CPNE1-223ENST00000475146 RIC8BQ9NVN3 520 aa22.69■■□□□ 1.22
CPNE1-223ENST00000475146 OPTCQ9UBM4 332 aa22.69■■□□□ 1.22
CPNE1-223ENST00000475146 LOC102723996A0A087X1L8 192 aa22.68■■□□□ 1.22
CPNE1-223ENST00000475146 EXOC1LA0A1B0GW35 172 aa22.68■■□□□ 1.22
CPNE1-223ENST00000475146 PRAMEF4O60810 478 aa22.68■■□□□ 1.22
CPNE1-223ENST00000475146 CDC123O75794 336 aaPredicted RBP22.68■■□□□ 1.22
CPNE1-223ENST00000475146 GFAPP14136 432 aa22.68■■□□□ 1.22
CPNE1-223ENST00000475146 GSTM2P28161 218 aa22.68■■□□□ 1.22
CPNE1-223ENST00000475146 STXBP1P61764 594 aaKnown RBP22.68■■□□□ 1.22
CPNE1-223ENST00000475146 HYAL2Q12891 473 aa22.68■■□□□ 1.22
CPNE1-223ENST00000475146 DOC2AQ14183 400 aa22.68■■□□□ 1.22
CPNE1-223ENST00000475146 ACAP2Q15057 778 aa22.68■■□□□ 1.22
CPNE1-223ENST00000475146 PAGE2BQ5JRK9 111 aa22.68■■□□□ 1.22
CPNE1-223ENST00000475146 AGAP7PQ5VUJ5 663 aa22.68■■□□□ 1.22
CPNE1-223ENST00000475146 PRAMEF9Q5VWM5 478 aa22.68■■□□□ 1.22
CPNE1-223ENST00000475146 SLC6A19Q695T7 634 aa22.68■■□□□ 1.22
CPNE1-223ENST00000475146 JMJD6Q6NYC1 403 aaPredicted RBP22.68■■□□□ 1.22
CPNE1-223ENST00000475146 TMEM205Q6UW68 189 aa22.68■■□□□ 1.22
CPNE1-223ENST00000475146 KBTBD2Q8IY47 623 aa22.68■■□□□ 1.22
CPNE1-223ENST00000475146 UBTD2Q8WUN7 234 aa22.68■■□□□ 1.22
CPNE1-223ENST00000475146 PTCD3Q96EY7 689 aaKnown RBP22.68■■□□□ 1.22
CPNE1-223ENST00000475146 AGAP4Q96P64 663 aa22.68■■□□□ 1.22
CPNE1-223ENST00000475146 EFCAB11Q9BUY7 163 aa22.68■■□□□ 1.22
CPNE1-223ENST00000475146 PITHD1Q9GZP4 211 aaPredicted RBP22.68■■□□□ 1.22
CPNE1-223ENST00000475146 NT5DC2Q9H857 520 aa22.68■■□□□ 1.22
CPNE1-223ENST00000475146 C19orf25Q9UFG5 118 aaPredicted RBP22.68■■□□□ 1.22
CPNE1-223ENST00000475146 A0A1W2PQ72 361 aa22.67■■□□□ 1.22
CPNE1-223ENST00000475146 CCDC189A1A4V9 331 aa22.67■■□□□ 1.22
CPNE1-223ENST00000475146 OR2W5A6NFC9 320 aa22.67■■□□□ 1.22
CPNE1-223ENST00000475146 ANKDD1BA6NHY2 528 aa22.67■■□□□ 1.22
CPNE1-223ENST00000475146 K7EPI3 171 aa22.67■■□□□ 1.22
CPNE1-223ENST00000475146 CHST10O43529 356 aa22.67■■□□□ 1.22
CPNE1-223ENST00000475146 CYC1P08574 325 aa22.67■■□□□ 1.22
CPNE1-223ENST00000475146 ABHD2P08910 425 aa22.67■■□□□ 1.22
CPNE1-223ENST00000475146 MTHFD2P13995 350 aa22.67■■□□□ 1.22
CPNE1-223ENST00000475146 IL10P22301 178 aa22.67■■□□□ 1.22
CPNE1-223ENST00000475146 CNTFP26441 200 aa22.67■■□□□ 1.22
CPNE1-223ENST00000475146 CD97P48960 835 aa22.67■■□□□ 1.22
CPNE1-223ENST00000475146 CHIT1Q13231 466 aa22.67■■□□□ 1.22
CPNE1-223ENST00000475146 LANCL3Q6ZV70 420 aa22.67■■□□□ 1.22
CPNE1-223ENST00000475146 TRMT10CQ7L0Y3 403 aaKnown RBP22.67■■□□□ 1.22
CPNE1-223ENST00000475146 ZADH2Q8N4Q0 377 aa22.67■■□□□ 1.22
CPNE1-223ENST00000475146 DCAKDQ8WVC6 231 aa22.67■■□□□ 1.22
CPNE1-223ENST00000475146 TBC1D20Q96BZ9 403 aa22.67■■□□□ 1.22
CPNE1-223ENST00000475146 WDR34Q96EX3 536 aa22.67■■□□□ 1.22
CPNE1-223ENST00000475146 OR1F2PQ96R84 312 aa22.67■■□□□ 1.22
CPNE1-223ENST00000475146 ZNF700Q9H0M5 742 aa22.67■■□□□ 1.22
CPNE1-223ENST00000475146 ZBTB20Q9HC78 741 aaPredicted RBP22.67■■□□□ 1.22
CPNE1-223ENST00000475146 SLAMF7Q9NQ25 335 aa22.67■■□□□ 1.22
CPNE1-223ENST00000475146 COPG2Q9UBF2 871 aa22.67■■□□□ 1.22
CPNE1-223ENST00000475146 ZNF180Q9UJW8 692 aa22.67■■□□□ 1.22
CPNE1-223ENST00000475146 ANGPTL3Q9Y5C1 460 aa22.67■■□□□ 1.22
CPNE1-223ENST00000475146 TRIM49D1C9J1S8 452 aa22.66■■□□□ 1.22
CPNE1-223ENST00000475146 C4orf51C9J302 202 aa22.66■■□□□ 1.22
CPNE1-223ENST00000475146 DNAJB6O75190 326 aa22.66■■□□□ 1.22
CPNE1-223ENST00000475146 UQCRHP07919 91 aa22.66■■□□□ 1.22
CPNE1-223ENST00000475146 EPORP19235 508 aa22.66■■□□□ 1.22
CPNE1-223ENST00000475146 CD22P20273 847 aa22.66■■□□□ 1.22
CPNE1-223ENST00000475146 KCNC4Q03721 635 aa22.66■■□□□ 1.22
CPNE1-223ENST00000475146 LAPTM5Q13571 262 aa22.66■■□□□ 1.22
CPNE1-223ENST00000475146 PCOLCEQ15113 449 aa22.66■■□□□ 1.22
CPNE1-223ENST00000475146 IGFBP7Q16270 282 aa22.66■■□□□ 1.22
CPNE1-223ENST00000475146 HIST2H2ACQ16777 129 aaPredicted RBP22.66■■□□□ 1.22
CPNE1-223ENST00000475146 PFKFB4Q16877 469 aa22.66■■□□□ 1.22
CPNE1-223ENST00000475146 TEX35Q5T0J7 233 aa22.66■■□□□ 1.22
CPNE1-223ENST00000475146 HIST2H2AA3Q6FI13 130 aa22.66■■□□□ 1.22
CPNE1-223ENST00000475146 GSPT2Q8IYD1 628 aaKnown RBP22.66■■□□□ 1.22
CPNE1-223ENST00000475146 GAL3ST3Q96A11 431 aa22.66■■□□□ 1.22
CPNE1-223ENST00000475146 ISL2Q96A47 359 aa22.66■■□□□ 1.22
CPNE1-223ENST00000475146 PNPLA2Q96AD5 504 aa22.66■■□□□ 1.22
CPNE1-223ENST00000475146 SEC16BQ96JE7 1060 aa22.66■■□□□ 1.22
CPNE1-223ENST00000475146 AICDAQ9GZX7 198 aa22.66■■□□□ 1.22
CPNE1-223ENST00000475146 CPSF2Q9P2I0 782 aaKnown RBP22.66■■□□□ 1.22
CPNE1-223ENST00000475146 DOCK10Q96BY6 2186 aa22.65■■□□□ 1.22
CPNE1-223ENST00000475146 IGHV3-20A0A0C4DH32 117 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms