RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 NXPH1P58417 271 aa18.92■□□□□ 0.62
SSR1-204ENST00000474597 TMEM35AQ53FP2 167 aa18.92■□□□□ 0.62
SSR1-204ENST00000474597 RUNDC3AQ59EK9 446 aa18.92■□□□□ 0.62
SSR1-204ENST00000474597 TMEM26Q6ZUK4 368 aa18.92■□□□□ 0.62
SSR1-204ENST00000474597 IKBIPQ70UQ0 350 aa18.92■□□□□ 0.62
SSR1-204ENST00000474597 NUDT13Q86X67 352 aa18.92■□□□□ 0.62
SSR1-204ENST00000474597 SFTPA2Q8IWL1 248 aa18.92■□□□□ 0.62
SSR1-204ENST00000474597 AVL9Q8NBF6 648 aa18.92■□□□□ 0.62
SSR1-204ENST00000474597 MFSD9Q8NBP5 474 aa18.92■□□□□ 0.62
SSR1-204ENST00000474597 PIF1Q9H611 641 aa18.92■□□□□ 0.62
SSR1-204ENST00000474597 ATP6V1HQ9UI12 483 aa18.92■□□□□ 0.62
SSR1-204ENST00000474597 TPP2P29144 1249 aaPredicted RBP18.91■□□□□ 0.62
SSR1-204ENST00000474597 HNRNPKP61978 463 aaKnown RBP eCLIP18.91■□□□□ 0.621e-8■■■□□ 16
SSR1-204ENST00000474597 RPS15AP62244 130 aaKnown RBP18.91■□□□□ 0.62
SSR1-204ENST00000474597 LRRC74AQ0VAA2 488 aa18.91■□□□□ 0.62
SSR1-204ENST00000474597 SELPLGQ14242 412 aa18.91■□□□□ 0.62
SSR1-204ENST00000474597 GTDC1Q4AE62 458 aa18.91■□□□□ 0.62
SSR1-204ENST00000474597 AASDHQ4L235 1098 aaPredicted RBP18.91■□□□□ 0.62
SSR1-204ENST00000474597 TJAP1Q5JTD0 557 aa18.91■□□□□ 0.62
SSR1-204ENST00000474597 MAMSTRQ6ZN01 415 aa18.91■□□□□ 0.62
SSR1-204ENST00000474597 LRRC74BQ6ZQY2 392 aa18.91■□□□□ 0.62
SSR1-204ENST00000474597 TRIM73Q86UV7 250 aa18.91■□□□□ 0.62
SSR1-204ENST00000474597 PAQR7Q86WK9 346 aa18.91■□□□□ 0.62
SSR1-204ENST00000474597 DNASE2BQ8WZ79 361 aa18.91■□□□□ 0.62
SSR1-204ENST00000474597 ZUFSPQ96AP4 578 aa18.91■□□□□ 0.62
SSR1-204ENST00000474597 PPCDCQ96CD2 204 aa18.91■□□□□ 0.62
SSR1-204ENST00000474597 COQ8BQ96D53 544 aa18.91■□□□□ 0.62
SSR1-204ENST00000474597 TACO1Q9BSH4 297 aaKnown RBP18.91■□□□□ 0.62
SSR1-204ENST00000474597 CD320Q9NPF0 282 aa18.91■□□□□ 0.62
SSR1-204ENST00000474597 SLC25A37Q9NYZ2 338 aa18.91■□□□□ 0.62
SSR1-204ENST00000474597 ACTR3BQ9P1U1 418 aa18.91■□□□□ 0.62
SSR1-204ENST00000474597 PCDHGA4Q9Y5G9 962 aa18.91■□□□□ 0.62
SSR1-204ENST00000474597 SNX13Q9Y5W8 968 aa18.91■□□□□ 0.62
SSR1-204ENST00000474597 PRSS51A0A1B0GVH4 220 aa18.9■□□□□ 0.62
SSR1-204ENST00000474597 CPSF4O95639 269 aaKnown RBP18.9■□□□□ 0.62
SSR1-204ENST00000474597 B3GALT4O96024 378 aa18.9■□□□□ 0.62
SSR1-204ENST00000474597 GSNP06396 782 aa18.9■□□□□ 0.62
SSR1-204ENST00000474597 HTR1EP28566 365 aa18.9■□□□□ 0.62
SSR1-204ENST00000474597 BSGP35613 385 aa18.9■□□□□ 0.62
SSR1-204ENST00000474597 CDKN2CP42773 168 aa18.9■□□□□ 0.62
SSR1-204ENST00000474597 SSR2P43308 183 aa18.9■□□□□ 0.62
SSR1-204ENST00000474597 CSNK1EP49674 416 aaKnown RBP18.9■□□□□ 0.62
SSR1-204ENST00000474597 HNRNPFP52597 415 aaKnown RBP18.9■□□□□ 0.62
SSR1-204ENST00000474597 PLA2G16P53816 162 aa18.9■□□□□ 0.62
SSR1-204ENST00000474597 WNT3P56703 355 aa18.9■□□□□ 0.62
SSR1-204ENST00000474597 BIRC2Q13490 618 aa18.9■□□□□ 0.62
SSR1-204ENST00000474597 CWF19L1Q69YN2 538 aaKnown RBP18.9■□□□□ 0.62
SSR1-204ENST00000474597 OR4C11Q6IEV9 310 aa18.9■□□□□ 0.62
SSR1-204ENST00000474597 FAM71E1Q6IPT2 247 aa18.9■□□□□ 0.62
SSR1-204ENST00000474597 ARMC6Q6NXE6 501 aa18.9■□□□□ 0.62
SSR1-204ENST00000474597 TSSK4Q6SA08 328 aa18.9■□□□□ 0.62
SSR1-204ENST00000474597 OOSP2Q86WS3 158 aa18.9■□□□□ 0.62
SSR1-204ENST00000474597 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.9■□□□□ 0.621e-9■■■■□ 20.6
SSR1-204ENST00000474597 MIEF2Q96C03 454 aa18.9■□□□□ 0.62
SSR1-204ENST00000474597 MTERF3Q96E29 417 aa18.9■□□□□ 0.62
SSR1-204ENST00000474597 BHLHE41Q9C0J9 482 aaPredicted RBP18.9■□□□□ 0.62
SSR1-204ENST00000474597 MIEF1Q9NQG6 463 aa18.9■□□□□ 0.62
SSR1-204ENST00000474597 HRASLS2Q9NWW9 162 aa18.9■□□□□ 0.62
SSR1-204ENST00000474597 DLGAP2Q9P1A6 1054 aa18.9■□□□□ 0.62
SSR1-204ENST00000474597 ADAM29Q9UKF5 820 aa18.9■□□□□ 0.62
SSR1-204ENST00000474597 BTBD3Q9Y2F9 522 aa18.9■□□□□ 0.62
SSR1-204ENST00000474597 NEUROG3Q9Y4Z2 214 aa18.9■□□□□ 0.62
SSR1-204ENST00000474597 TP53BP1Q12888 1972 aaPredicted RBP18.9■□□□□ 0.62
SSR1-204ENST00000474597 CCDC163A0A0D9SF12 145 aa18.9■□□□□ 0.62
SSR1-204ENST00000474597 LRIT2A6NDA9 550 aa18.9■□□□□ 0.62
SSR1-204ENST00000474597 VILLO15195 856 aa18.9■□□□□ 0.62
SSR1-204ENST00000474597 BCAT2O15382 392 aaPredicted RBP18.9■□□□□ 0.62
SSR1-204ENST00000474597 GMNNO75496 209 aa18.9■□□□□ 0.62
SSR1-204ENST00000474597 PDGFBP01127 241 aaPredicted RBP18.9■□□□□ 0.62
SSR1-204ENST00000474597 C8BP07358 591 aa18.9■□□□□ 0.62
SSR1-204ENST00000474597 IL3P08700 152 aa18.9■□□□□ 0.62
SSR1-204ENST00000474597 FURINP09958 794 aa18.9■□□□□ 0.62
SSR1-204ENST00000474597 HOXB3P14651 431 aaPredicted RBP18.9■□□□□ 0.62
SSR1-204ENST00000474597 MAGP20916 626 aa18.9■□□□□ 0.62
SSR1-204ENST00000474597 SOX11P35716 441 aa18.9■□□□□ 0.62
SSR1-204ENST00000474597 VHLP40337 213 aa18.9■□□□□ 0.62
SSR1-204ENST00000474597 GSTM5P46439 218 aa18.9■□□□□ 0.62
SSR1-204ENST00000474597 AFF3P51826 1226 aaKnown RBP18.9■□□□□ 0.62
SSR1-204ENST00000474597 RHDQ02161 417 aa18.9■□□□□ 0.62
SSR1-204ENST00000474597 SIGLEC14Q08ET2 396 aa18.9■□□□□ 0.62
SSR1-204ENST00000474597 ZIC1Q15915 447 aa18.9■□□□□ 0.62
SSR1-204ENST00000474597 ZNF621Q6ZSS3 439 aa18.9■□□□□ 0.62
SSR1-204ENST00000474597 PROSER1Q86XN7 944 aa18.9■□□□□ 0.62
SSR1-204ENST00000474597 PTRH1Q86Y79 214 aaKnown RBP18.9■□□□□ 0.62
SSR1-204ENST00000474597 MSRB3Q8IXL7 192 aa18.9■□□□□ 0.62
SSR1-204ENST00000474597 TNIP2Q8NFZ5 429 aa18.9■□□□□ 0.62
SSR1-204ENST00000474597 OR10A6Q8NH74 314 aa18.9■□□□□ 0.62
SSR1-204ENST00000474597 C1orf216Q8TAB5 229 aa18.9■□□□□ 0.62
SSR1-204ENST00000474597 FLVCR1-AS1Q8TAF5 88 aa18.9■□□□□ 0.62
SSR1-204ENST00000474597 ZNF717Q9BY31 904 aaPredicted RBP18.9■□□□□ 0.62
SSR1-204ENST00000474597 ANKMY1Q9P2S6 941 aa18.9■□□□□ 0.62
SSR1-204ENST00000474597 BTNL2Q9UIR0 455 aa18.9■□□□□ 0.62
SSR1-204ENST00000474597 WBP11Q9Y2W2 641 aaKnown RBP18.9■□□□□ 0.62
SSR1-204ENST00000474597 GOLGA4Q13439 2230 aaKnown RBP18.9■□□□□ 0.62
SSR1-204ENST00000474597 SPAG17Q6Q759 2223 aa18.89■□□□□ 0.61
SSR1-204ENST00000474597 TRBV5-3A0A0A0MS03 114 aa18.89■□□□□ 0.61
SSR1-204ENST00000474597 ARPC2O15144 300 aa18.89■□□□□ 0.61
SSR1-204ENST00000474597 EPN2O95208 641 aa18.89■□□□□ 0.61
SSR1-204ENST00000474597 FKBP9O95302 570 aa18.89■□□□□ 0.61
SSR1-204ENST00000474597 STATHP02808 62 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms