RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 ZCCHC10Q8TBK6 192 aa9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 APIPQ96GX9 242 aa9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 NSL1Q96IY1 281 aa9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 F2RL3Q96RI0 385 aa9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 C17orf62Q9BQA9 187 aa9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 TBCDQ9BTW9 1192 aa9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 SARGQ9BW04 601 aa9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 FAIM2Q9BWQ8 316 aa9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 WDR41Q9HAD4 459 aa9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 MIEF1Q9NQG6 463 aa9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 ATAD3AQ9NVI7 634 aa9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 TMEM45AQ9NWC5 275 aa9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 MCM8Q9UJA3 840 aa9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 ADAM29Q9UKF5 820 aa9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 CLCA2Q9UQC9 943 aa9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 KLK4Q9Y5K2 254 aa9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 COL5A1P20908 1838 aaPredicted RBP9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 CCDC154A6NI56 674 aa9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 BBIP1A8MTZ0 92 aa9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 NPIPB8E9PQR5 432 aa9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 H0YGG7 62 aa9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 CFLARO15519 480 aa9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 B4GAT1O43505 415 aa9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 B3GALT2O43825 422 aa9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 LCMT2O60294 686 aaKnown RBP9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 PRMT3O60678 531 aa9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 C9P02748 559 aa9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 STATHP02808 62 aa9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 KLK1P06870 262 aa9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 SNRPB2P08579 225 aaKnown RBP9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 ALDOCP09972 364 aaKnown RBP9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 G6PDP11413 515 aa9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 BCKDHAP12694 445 aa9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 COX4I1P13073 169 aa9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 COX7A2P14406 83 aa9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 PRPS1L1P21108 318 aa9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 CD1CP29017 333 aa9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 CSTF2P33240 577 aaKnown RBP eCLIP9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 ACADVLP49748 655 aa9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 POLR2JP52435 117 aaKnown RBP9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 DIO3P55073 304 aa9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 ARF3P61204 181 aaPredicted RBP9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 CCL7P80098 99 aa9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 ACY1Q03154 408 aa9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 SLC9A5Q14940 896 aa9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 HEPACAMQ14CZ8 416 aa9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 HERC3Q15034 1050 aa9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 DEFB110Q30KQ9 67 aa9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 FAM91A1Q658Y4 838 aa9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 OR4C11Q6IEV9 310 aa9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 ADNP2Q6IQ32 1131 aa9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 IKBIPQ70UQ0 350 aa9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 SNX32Q86XE0 403 aa9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 MCATQ8IVS2 390 aaKnown RBP9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 ARHGAP24Q8N264 748 aa9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 VPS37AQ8NEZ2 397 aa9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 NT5CQ8TCD5 201 aa9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 CHTF18Q8WVB6 975 aa9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 TMEM74Q96NL1 305 aa9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 TSSK3Q96PN8 268 aa9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 NUDT22Q9BRQ3 303 aa9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 CCDC106Q9BWC9 280 aa9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 BRINP2Q9C0B6 783 aa9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 RMND5AQ9H871 391 aa9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 ACTR5Q9H9F9 607 aaPredicted RBP9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 ANKHQ9HCJ1 492 aa9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 SDR39U1Q9NRG7 319 aaPredicted RBP9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 LYARQ9NX58 379 aaKnown RBP9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 SERTAD3Q9UJW9 196 aa9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 ATXN7L1Q9ULK2 861 aaPredicted RBP9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 BTBD3Q9Y2F9 522 aa9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 SNRNP200O75643 2136 aaKnown RBP9.8□□□□□ -0.84
PRPF38A-202ENST00000474048 IGHV5-51A0A0C4DH38 117 aa9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 LOC100653049A0A140TA62 436 aa9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 FAM234BA2RU67 622 aa9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 LRIT2A6NDA9 550 aa9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 C4orf47A7E2U8 309 aa9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 TMEM150CB9EJG8 249 aa9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 PLPP1O14494 284 aa9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 KIF1CO43896 1103 aaKnown RBP9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 SH3BP5O60239 455 aa9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 CTSVO60911 334 aa9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 OR2B3O76000 313 aa9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 KRT34O76011 436 aa9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 LRATO95237 230 aa9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 IL6P05231 212 aa9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 ZNF888P0CJ79 500 aaPredicted RBP9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 SDC1P18827 310 aa9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 JAK1P23458 1154 aa9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 ACP1P24666 158 aa9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 TLX1P31314 330 aaPredicted RBP9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 CSF2RBP32927 897 aa9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 S100A3P33764 101 aa9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 BUD31P41223 144 aaPredicted RBP9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 AVPR1BP47901 424 aa9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 LSSP48449 732 aa9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 ALDH9A1P49189 494 aa9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 MTTPP55157 894 aa9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 RAB8AP61006 207 aa9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 BTN3A2P78410 334 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms