RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 LOXL2Q9Y4K0 774 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 SNX9Q9Y5X1 595 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 OBSL1O75147 1896 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 COL27A1Q8IZC6 1860 aaPredicted RBP2.24□□□□□ -2.05
CALD1-216ENST00000473714 NSD1Q96L73 2696 aaPredicted RBP2.24□□□□□ -2.05
CALD1-216ENST00000473714 RP1P56715 2156 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 NFASCO94856 1347 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 CCDC171Q6TFL3 1326 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 TRBV5-3A0A0A0MS03 114 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 A0A1W2PRV1 198 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 GAGE12JA6NER3 117 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 LINC01548A6NM66 108 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 B4DGG1 531 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 PRSS44E7EML9 344 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 J3QR06 171 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 ZNF197O14709 1029 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 SLC7A4O43246 635 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 XRCC3O43542 346 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 JAK2O60674 1132 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 FMO6PO60774 539 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 DDHD2O94830 711 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 VNN2O95498 520 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 C22orf31O95567 290 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 LDOC1O95751 146 aaPredicted RBP2.23□□□□□ -2.05
CALD1-216ENST00000473714 MT-ND3P03897 115 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 KLKB1P03952 638 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 GBAP04062 536 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 TGFB3P10600 412 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 HSPA5P11021 654 aaKnown RBP2.23□□□□□ -2.05
CALD1-216ENST00000473714 PRLRP16471 622 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 NR1D1P20393 614 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 MAOAP21397 527 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 PSMA3P25788 255 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 U2AF2P26368 475 aaKnown RBP eCLIP2.23□□□□□ -2.05
CALD1-216ENST00000473714 MARK3P27448 753 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 RBMS1P29558 406 aaKnown RBP2.23□□□□□ -2.05
CALD1-216ENST00000473714 CDC25AP30304 524 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 SSTR2P30874 369 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 GNL1P36915 607 aaPredicted RBP2.23□□□□□ -2.05
CALD1-216ENST00000473714 CCR2P41597 374 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 MMP13P45452 471 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 SLC9A3P48764 834 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 CDK3Q00526 305 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 PDE1BQ01064 536 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 CBX3Q13185 183 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 ZNF273Q14593 569 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 PTGR1Q14914 329 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 TWISTNBQ3B726 338 aaPredicted RBP2.23□□□□□ -2.05
CALD1-216ENST00000473714 ITPRIPL2Q3MIP1 535 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 TTC31Q49AM3 519 aaPredicted RBP2.23□□□□□ -2.05
CALD1-216ENST00000473714 C14orf28Q4W4Y0 310 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 CEP78Q5JTW2 689 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 Q5PR19 223 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 MPP7Q5T2T1 576 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 SHEQ5VZ18 495 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 NSUN5P2Q63ZY6 315 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 FAM91A1Q658Y4 838 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 FIGLAQ6QHK4 219 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 KDM7AQ6ZMT4 941 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 SPATA19Q7Z5L4 167 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 PHLDB2Q86SQ0 1253 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 TSPAN33Q86UF1 283 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 CEP57Q86XR8 500 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 GPSM1Q86YR5 675 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 TIGD4Q8IY51 512 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 CLYBLQ8N0X4 340 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 GALNT16Q8N428 558 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 RASGEF1CQ8N431 466 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 SLC5A8Q8N695 610 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 ZNF611Q8N823 705 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 TEX45Q8NA69 505 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 NHLRC2Q8NBF2 726 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 OR10S1Q8NGN2 331 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 CCDC26Q8TAB7 109 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 C9orf43Q8TAL5 461 aaPredicted RBP2.23□□□□□ -2.05
CALD1-216ENST00000473714 BICD2Q8TD16 824 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 GPT2Q8TD30 523 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 HTR3CQ8WXA8 447 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 ATL1Q8WXF7 558 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 DNASE2BQ8WZ79 361 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 NDRG1Q92597 394 aaKnown RBP2.23□□□□□ -2.05
CALD1-216ENST00000473714 RND1Q92730 232 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 EXT2Q93063 718 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 SPSB1Q96BD6 273 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 LINC00615Q96LM1 132 aaPredicted RBP2.23□□□□□ -2.05
CALD1-216ENST00000473714 APOLD1Q96LR9 279 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 NLRP4Q96MN2 994 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 ZNF48Q96MX3 618 aaPredicted RBP2.23□□□□□ -2.05
CALD1-216ENST00000473714 LRFN5Q96NI6 719 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 DACH2Q96NX9 599 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 LRRC3BQ96PB8 259 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 IWS1Q96ST2 819 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 INTS14Q96SY0 518 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 MTERF1Q99551 399 aaKnown RBP2.23□□□□□ -2.05
CALD1-216ENST00000473714 CMKLR1Q99788 373 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 WDR77Q9BQA1 342 aaPredicted RBP2.23□□□□□ -2.05
CALD1-216ENST00000473714 RIOK1Q9BRS2 568 aaKnown RBP2.23□□□□□ -2.05
CALD1-216ENST00000473714 TMEM175Q9BSA9 504 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 KATNB1Q9BVA0 655 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 GPR88Q9GZN0 384 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms