RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 CHCHD6Q9BRQ6 235 aa20.31■□□□□ 0.84
COL18A1-207ENST00000473212 CCL26Q9Y258 94 aa20.31■□□□□ 0.84
COL18A1-207ENST00000473212 RUVBL1Q9Y265 456 aaKnown RBP20.31■□□□□ 0.84
COL18A1-207ENST00000473212 C1orf226A1L170 272 aa20.3■□□□□ 0.84
COL18A1-207ENST00000473212 EIF3FO00303 357 aaPredicted RBP20.3■□□□□ 0.84
COL18A1-207ENST00000473212 HOXA2O43364 376 aa20.3■□□□□ 0.84
COL18A1-207ENST00000473212 DNTTP04053 509 aa20.3■□□□□ 0.84
COL18A1-207ENST00000473212 HSMCR30P0CW71 290 aa20.3■□□□□ 0.84
COL18A1-207ENST00000473212 MAPK8P45983 427 aa20.3■□□□□ 0.84
COL18A1-207ENST00000473212 BDKRB1P46663 353 aa20.3■□□□□ 0.84
COL18A1-207ENST00000473212 ARMCX4Q5H9R4 360 aa20.3■□□□□ 0.84
COL18A1-207ENST00000473212 C1QTNF12Q5T7M4 302 aa20.3■□□□□ 0.84
COL18A1-207ENST00000473212 ANGPTL8Q6UXH0 198 aa20.3■□□□□ 0.84
COL18A1-207ENST00000473212 STX19Q8N4C7 294 aa20.3■□□□□ 0.84
COL18A1-207ENST00000473212 NIPSNAP1Q9BPW8 284 aa20.3■□□□□ 0.84
COL18A1-207ENST00000473212 NXF2Q9GZY0 626 aaKnown RBP20.3■□□□□ 0.84
COL18A1-207ENST00000473212 ZNF226Q9NYT6 803 aa20.3■□□□□ 0.84
COL18A1-207ENST00000473212 NINQ8N4C6 2090 aa20.3■□□□□ 0.84
COL18A1-207ENST00000473212 CSNK1DP48730 415 aa20.3■□□□□ 0.84
COL18A1-207ENST00000473212 EPHB3P54753 998 aa20.3■□□□□ 0.84
COL18A1-207ENST00000473212 SNRPD1P62314 119 aaKnown RBP20.3■□□□□ 0.84
COL18A1-207ENST00000473212 MLIPQ5VWP3 458 aa20.3■□□□□ 0.84
COL18A1-207ENST00000473212 ZNF605Q86T29 641 aa20.3■□□□□ 0.84
COL18A1-207ENST00000473212 THOC6Q86W42 341 aaKnown RBP20.3■□□□□ 0.84
COL18A1-207ENST00000473212 FAM217AQ8IXS0 508 aa20.3■□□□□ 0.84
COL18A1-207ENST00000473212 OR4K1Q8NGD4 311 aa20.3■□□□□ 0.84
COL18A1-207ENST00000473212 CTRCQ99895 268 aa20.3■□□□□ 0.84
COL18A1-207ENST00000473212 PCDHGA2Q9Y5H1 932 aa20.3■□□□□ 0.84
COL18A1-207ENST00000473212 A0A1W2PRU2 124 aa20.29■□□□□ 0.84
COL18A1-207ENST00000473212 HLA-EP13747 358 aa20.29■□□□□ 0.84
COL18A1-207ENST00000473212 ETV3P41162 512 aa20.29■□□□□ 0.84
COL18A1-207ENST00000473212 DGKEP52429 567 aa20.29■□□□□ 0.84
COL18A1-207ENST00000473212 CDH12P55289 794 aa20.29■□□□□ 0.84
COL18A1-207ENST00000473212 ST3GAL4Q11206 333 aa20.29■□□□□ 0.84
COL18A1-207ENST00000473212 SF3B4Q15427 424 aaKnown RBP eCLIP20.29■□□□□ 0.842e-7■■■■■ 43.4
COL18A1-207ENST00000473212 LRIT3Q3SXY7 679 aa20.29■□□□□ 0.84
COL18A1-207ENST00000473212 ZNF385BQ569K4 471 aa20.29■□□□□ 0.84
COL18A1-207ENST00000473212 LIPJQ5W064 366 aa20.29■□□□□ 0.84
COL18A1-207ENST00000473212 FAM180BQ6P0A1 224 aa20.29■□□□□ 0.84
COL18A1-207ENST00000473212 METTL4Q8N3J2 472 aa20.29■□□□□ 0.84
COL18A1-207ENST00000473212 KBTBD8Q8NFY9 601 aa20.29■□□□□ 0.84
COL18A1-207ENST00000473212 FIBINQ8TAL6 211 aa20.29■□□□□ 0.84
COL18A1-207ENST00000473212 GPATCH2Q9NW75 528 aa20.29■□□□□ 0.84
COL18A1-207ENST00000473212 SPATA6Q9NWH7 488 aaPredicted RBP20.29■□□□□ 0.84
COL18A1-207ENST00000473212 TAS2R16Q9NYV7 291 aa20.29■□□□□ 0.84
COL18A1-207ENST00000473212 PCDHGA3Q9Y5H0 932 aa20.29■□□□□ 0.84
COL18A1-207ENST00000473212 MPC1LP0DKB6 136 aa20.29■□□□□ 0.84
COL18A1-207ENST00000473212 PCGF2P35227 344 aa20.29■□□□□ 0.84
COL18A1-207ENST00000473212 SELENOWP63302 87 aa20.29■□□□□ 0.84
COL18A1-207ENST00000473212 SPIBQ01892 262 aa20.29■□□□□ 0.84
COL18A1-207ENST00000473212 ZNF45Q02386 682 aa20.29■□□□□ 0.84
COL18A1-207ENST00000473212 TPGS2Q68CL5 300 aa20.29■□□□□ 0.84
COL18A1-207ENST00000473212 MCCC1Q96RQ3 725 aaPredicted RBP20.29■□□□□ 0.84
COL18A1-207ENST00000473212 YIPF2Q9BWQ6 316 aa20.29■□□□□ 0.84
COL18A1-207ENST00000473212 MRPL17Q9NRX2 175 aaKnown RBP20.29■□□□□ 0.84
COL18A1-207ENST00000473212 ACSL6Q9UKU0 697 aa20.29■□□□□ 0.84
COL18A1-207ENST00000473212 A3GALT2U3KPV4 340 aa20.29■□□□□ 0.84
COL18A1-207ENST00000473212 HELZP42694 1942 aaKnown RBP20.28■□□□□ 0.84
COL18A1-207ENST00000473212 PRAMEF25A6NGN4 478 aa20.28■□□□□ 0.84
COL18A1-207ENST00000473212 PSMD11O00231 422 aa20.28■□□□□ 0.84
COL18A1-207ENST00000473212 ADAMDEC1O15204 470 aa20.28■□□□□ 0.84
COL18A1-207ENST00000473212 ASNA1O43681 348 aa20.28■□□□□ 0.84
COL18A1-207ENST00000473212 LATS1O95835 1130 aa20.28■□□□□ 0.84
COL18A1-207ENST00000473212 PTTG1O95997 202 aa20.28■□□□□ 0.84
COL18A1-207ENST00000473212 ANXA4P09525 319 aaPredicted RBP20.28■□□□□ 0.84
COL18A1-207ENST00000473212 CRATP43155 626 aa20.28■□□□□ 0.84
COL18A1-207ENST00000473212 RGS6P49758 472 aa20.28■□□□□ 0.84
COL18A1-207ENST00000473212 CTSCP53634 463 aa20.28■□□□□ 0.84
COL18A1-207ENST00000473212 PTPN5P54829 565 aa20.28■□□□□ 0.84
COL18A1-207ENST00000473212 PRKCDQ05655 676 aa20.28■□□□□ 0.84
COL18A1-207ENST00000473212 NPAS3Q8IXF0 933 aa20.28■□□□□ 0.84
COL18A1-207ENST00000473212 Q8N9G6 341 aaPredicted RBP20.28■□□□□ 0.84
COL18A1-207ENST00000473212 C11orf65Q8NCR3 313 aa20.28■□□□□ 0.84
COL18A1-207ENST00000473212 SORCS1Q8WY21 1168 aa20.28■□□□□ 0.84
COL18A1-207ENST00000473212 COL21A1Q96P44 957 aa20.28■□□□□ 0.84
COL18A1-207ENST00000473212 SPATA9Q9BWV2 254 aa20.28■□□□□ 0.84
COL18A1-207ENST00000473212 CEP44Q9C0F1 390 aa20.28■□□□□ 0.84
COL18A1-207ENST00000473212 EHD1Q9H4M9 534 aa20.28■□□□□ 0.84
COL18A1-207ENST00000473212 SH3BP4Q9P0V3 963 aa20.28■□□□□ 0.84
COL18A1-207ENST00000473212 EXO1Q9UQ84 846 aaKnown RBP20.28■□□□□ 0.84
COL18A1-207ENST00000473212 FADS2P1A8MWK0 482 aa20.28■□□□□ 0.84
COL18A1-207ENST00000473212 SAP18O00422 153 aaKnown RBP20.28■□□□□ 0.84
COL18A1-207ENST00000473212 HAT1O14929 419 aa20.28■□□□□ 0.84
COL18A1-207ENST00000473212 NR4A2P43354 598 aa20.28■□□□□ 0.84
COL18A1-207ENST00000473212 AP1S2P56377 157 aa20.28■□□□□ 0.84
COL18A1-207ENST00000473212 EXOC3L2Q2M3D2 409 aa20.28■□□□□ 0.84
COL18A1-207ENST00000473212 IER5LQ5T953 404 aa20.28■□□□□ 0.84
COL18A1-207ENST00000473212 OTOP2Q7RTS6 562 aa20.28■□□□□ 0.84
COL18A1-207ENST00000473212 LGI4Q8N135 537 aa20.28■□□□□ 0.84
COL18A1-207ENST00000473212 VPS37AQ8NEZ2 397 aa20.28■□□□□ 0.84
COL18A1-207ENST00000473212 CCM2Q9BSQ5 444 aa20.28■□□□□ 0.84
COL18A1-207ENST00000473212 TSEN34Q9BSV6 310 aaKnown RBP20.28■□□□□ 0.84
COL18A1-207ENST00000473212 CCDC59Q9P031 241 aaKnown RBP20.28■□□□□ 0.84
COL18A1-207ENST00000473212 BTNL2Q9UIR0 455 aa20.28■□□□□ 0.84
COL18A1-207ENST00000473212 LSM7Q9UK45 103 aaKnown RBP20.28■□□□□ 0.84
COL18A1-207ENST00000473212 SH2B3Q9UQQ2 575 aa20.28■□□□□ 0.84
COL18A1-207ENST00000473212 PCM1Q15154 2024 aa20.28■□□□□ 0.84
COL18A1-207ENST00000473212 J3KTA2 159 aa20.27■□□□□ 0.84
COL18A1-207ENST00000473212 TEX28O15482 410 aa20.27■□□□□ 0.84
COL18A1-207ENST00000473212 ETFAP13804 333 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms