RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 KRT78Q8N1N4 520 aa8.66□□□□□ -1.02
SMC4-214ENST00000472991 DTWD1Q8N5C7 304 aa8.66□□□□□ -1.02
SMC4-214ENST00000472991 TBC1D19Q8N5T2 526 aa8.66□□□□□ -1.02
SMC4-214ENST00000472991 ANKRD53Q8N9V6 530 aa8.66□□□□□ -1.02
SMC4-214ENST00000472991 SLC38A9Q8NBW4 561 aa8.66□□□□□ -1.02
SMC4-214ENST00000472991 ZNF248Q8NDW4 579 aa8.66□□□□□ -1.02
SMC4-214ENST00000472991 NLGN4YQ8NFZ3 816 aaPredicted RBP8.66□□□□□ -1.02
SMC4-214ENST00000472991 ZCCHC10Q8TBK6 192 aa8.66□□□□□ -1.02
SMC4-214ENST00000472991 RDH11Q8TC12 318 aa8.66□□□□□ -1.02
SMC4-214ENST00000472991 ZNF483Q8TF39 744 aaPredicted RBP8.66□□□□□ -1.02
SMC4-214ENST00000472991 NUDT8Q8WV74 236 aa8.66□□□□□ -1.02
SMC4-214ENST00000472991 KCNE4Q8WWG9 221 aa8.66□□□□□ -1.02
SMC4-214ENST00000472991 ATP6V1E2Q96A05 226 aa8.66□□□□□ -1.02
SMC4-214ENST00000472991 MOCOSQ96EN8 888 aa8.66□□□□□ -1.02
SMC4-214ENST00000472991 WDR34Q96EX3 536 aa8.66□□□□□ -1.02
SMC4-214ENST00000472991 PTCD3Q96EY7 689 aaKnown RBP8.66□□□□□ -1.02
SMC4-214ENST00000472991 C10orf90Q96M02 699 aa8.66□□□□□ -1.02
SMC4-214ENST00000472991 MACROD1Q9BQ69 325 aa8.66□□□□□ -1.02
SMC4-214ENST00000472991 NDC1Q9BTX1 674 aa8.66□□□□□ -1.02
SMC4-214ENST00000472991 EFCAB11Q9BUY7 163 aa8.66□□□□□ -1.02
SMC4-214ENST00000472991 SARGQ9BW04 601 aa8.66□□□□□ -1.02
SMC4-214ENST00000472991 C1QTNF3Q9BXJ4 246 aa8.66□□□□□ -1.02
SMC4-214ENST00000472991 ERVK-6Q9BXR3 956 aa8.66□□□□□ -1.02
SMC4-214ENST00000472991 STMN4Q9H169 189 aaPredicted RBP8.66□□□□□ -1.02
SMC4-214ENST00000472991 EHD1Q9H4M9 534 aa8.66□□□□□ -1.02
SMC4-214ENST00000472991 NOL11Q9H8H0 719 aaKnown RBP8.66□□□□□ -1.02
SMC4-214ENST00000472991 IPPKQ9H8X2 491 aa8.66□□□□□ -1.02
SMC4-214ENST00000472991 TMBIM4Q9HC24 238 aa8.66□□□□□ -1.02
SMC4-214ENST00000472991 ZBTB26Q9HCK0 441 aa8.66□□□□□ -1.02
SMC4-214ENST00000472991 CUTCQ9NTM9 273 aa8.66□□□□□ -1.02
SMC4-214ENST00000472991 TXLNGQ9NUQ3 528 aa8.66□□□□□ -1.02
SMC4-214ENST00000472991 COPG2Q9UBF2 871 aa8.66□□□□□ -1.02
SMC4-214ENST00000472991 NDOR1Q9UHB4 597 aa8.66□□□□□ -1.02
SMC4-214ENST00000472991 SRPK3Q9UPE1 567 aa8.66□□□□□ -1.02
SMC4-214ENST00000472991 RAXQ9Y2V3 346 aa8.66□□□□□ -1.02
SMC4-214ENST00000472991 AP1M2Q9Y6Q5 423 aa8.66□□□□□ -1.02
SMC4-214ENST00000472991 ZFHX4Q86UP3 3567 aa8.66□□□□□ -1.02
SMC4-214ENST00000472991 CELSR3Q9NYQ7 3312 aa8.66□□□□□ -1.02
SMC4-214ENST00000472991 KCNE1BA0A087WTH5 132 aa8.65□□□□□ -1.02
SMC4-214ENST00000472991 TAF4O00268 1085 aa8.65□□□□□ -1.02
SMC4-214ENST00000472991 OR7A17O14581 309 aa8.65□□□□□ -1.02
SMC4-214ENST00000472991 DSCR3O14972 297 aa8.65□□□□□ -1.02
SMC4-214ENST00000472991 NDUFS4O43181 175 aa8.65□□□□□ -1.02
SMC4-214ENST00000472991 H2AFYO75367 372 aaKnown RBP8.65□□□□□ -1.02
SMC4-214ENST00000472991 SLC35G6P0C7Q6 338 aa8.65□□□□□ -1.02
SMC4-214ENST00000472991 CPA3P15088 417 aa8.65□□□□□ -1.02
SMC4-214ENST00000472991 RORAP35398 523 aa8.65□□□□□ -1.02
SMC4-214ENST00000472991 AHRP35869 848 aa8.65□□□□□ -1.02
SMC4-214ENST00000472991 CASP2P42575 452 aa8.65□□□□□ -1.02
SMC4-214ENST00000472991 PRKAA2P54646 552 aa8.65□□□□□ -1.02
SMC4-214ENST00000472991 ARSFP54793 590 aa8.65□□□□□ -1.02
SMC4-214ENST00000472991 CDH13P55290 713 aa8.65□□□□□ -1.02
SMC4-214ENST00000472991 TRAF3Q13114 568 aa8.65□□□□□ -1.02
SMC4-214ENST00000472991 LAPTM5Q13571 262 aa8.65□□□□□ -1.02
SMC4-214ENST00000472991 E2F2Q14209 437 aa8.65□□□□□ -1.02
SMC4-214ENST00000472991 MAP7Q14244 749 aa8.65□□□□□ -1.02
SMC4-214ENST00000472991 SLC9A5Q14940 896 aa8.65□□□□□ -1.02
SMC4-214ENST00000472991 TBCCQ15814 346 aa8.65□□□□□ -1.02
SMC4-214ENST00000472991 RBBP7Q16576 425 aa8.65□□□□□ -1.02
SMC4-214ENST00000472991 MUM1Q2TAK8 710 aa8.65□□□□□ -1.02
SMC4-214ENST00000472991 PAGE2BQ5JRK9 111 aa8.65□□□□□ -1.02
SMC4-214ENST00000472991 GRHL2Q6ISB3 625 aa8.65□□□□□ -1.02
SMC4-214ENST00000472991 C6orf15Q6UXA7 325 aaPredicted RBP8.65□□□□□ -1.02
SMC4-214ENST00000472991 TMIGD1Q6UXZ0 262 aa8.65□□□□□ -1.02
SMC4-214ENST00000472991 TTLL10Q6ZVT0 673 aa8.65□□□□□ -1.02
SMC4-214ENST00000472991 VASH2Q86V25 355 aa8.65□□□□□ -1.02
SMC4-214ENST00000472991 C10orf107Q8IVU9 208 aa8.65□□□□□ -1.02
SMC4-214ENST00000472991 DSELQ8IZU8 1212 aa8.65□□□□□ -1.02
SMC4-214ENST00000472991 ESX1Q8N693 406 aa8.65□□□□□ -1.02
SMC4-214ENST00000472991 METTL27Q8N6F8 245 aaPredicted RBP8.65□□□□□ -1.02
SMC4-214ENST00000472991 IL22RA1Q8N6P7 574 aa8.65□□□□□ -1.02
SMC4-214ENST00000472991 KCT2Q8NC54 265 aa8.65□□□□□ -1.02
SMC4-214ENST00000472991 CAMKVQ8NCB2 501 aa8.65□□□□□ -1.02
SMC4-214ENST00000472991 OR52B6Q8NGF0 335 aa8.65□□□□□ -1.02
SMC4-214ENST00000472991 PPP4R1Q8TF05 950 aa8.65□□□□□ -1.02
SMC4-214ENST00000472991 SLC13A3Q8WWT9 602 aa8.65□□□□□ -1.02
SMC4-214ENST00000472991 CCT6BQ92526 530 aa8.65□□□□□ -1.02
SMC4-214ENST00000472991 MR1Q95460 341 aa8.65□□□□□ -1.02
SMC4-214ENST00000472991 NKD1Q969G9 470 aa8.65□□□□□ -1.02
SMC4-214ENST00000472991 ARL8AQ96BM9 186 aa8.65□□□□□ -1.02
SMC4-214ENST00000472991 TLCD1Q96CP7 247 aa8.65□□□□□ -1.02
SMC4-214ENST00000472991 TM4SF19Q96DZ7 209 aa8.65□□□□□ -1.02
SMC4-214ENST00000472991 CCDC126Q96EE4 140 aa8.65□□□□□ -1.02
SMC4-214ENST00000472991 L3HYPDHQ96EM0 354 aa8.65□□□□□ -1.02
SMC4-214ENST00000472991 MECRQ9BV79 373 aa8.65□□□□□ -1.02
SMC4-214ENST00000472991 NLNQ9BYT8 704 aa8.65□□□□□ -1.02
SMC4-214ENST00000472991 ACTR8Q9H981 624 aa8.65□□□□□ -1.02
SMC4-214ENST00000472991 VIPAS39Q9H9C1 493 aa8.65□□□□□ -1.02
SMC4-214ENST00000472991 AKIRIN1Q9H9L7 192 aaPredicted RBP8.65□□□□□ -1.02
SMC4-214ENST00000472991 LHX9Q9NQ69 397 aa8.65□□□□□ -1.02
SMC4-214ENST00000472991 ZFP69BQ9UJL9 534 aa8.65□□□□□ -1.02
SMC4-214ENST00000472991 MRPS2Q9Y399 296 aaKnown RBP8.65□□□□□ -1.02
SMC4-214ENST00000472991 ACTL7BQ9Y614 415 aa8.65□□□□□ -1.02
SMC4-214ENST00000472991 USP24Q9UPU5 2620 aa8.64□□□□□ -1.03
SMC4-214ENST00000472991 LOC101059948A0A1B0GTJ6 334 aa8.64□□□□□ -1.03
SMC4-214ENST00000472991 A0A1B0GTL3 188 aa8.64□□□□□ -1.03
SMC4-214ENST00000472991 A0A1B0GX78 115 aa8.64□□□□□ -1.03
SMC4-214ENST00000472991 HYKKA2RU49 373 aa8.64□□□□□ -1.03
SMC4-214ENST00000472991 PPP6CO00743 305 aa8.64□□□□□ -1.03
SMC4-214ENST00000472991 TXNDC9O14530 226 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms