RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 TRAF3Q13114 568 aa19.73■□□□□ 0.75
TOP3A-204ENST00000472959 SLC9A5Q14940 896 aa19.73■□□□□ 0.75
TOP3A-204ENST00000472959 GGTA1PQ4G0N0 100 aa19.73■□□□□ 0.75
TOP3A-204ENST00000472959 C10orf62Q5T681 223 aaPredicted RBP19.73■□□□□ 0.75
TOP3A-204ENST00000472959 COX15Q7KZN9 410 aa19.73■□□□□ 0.75
TOP3A-204ENST00000472959 VN1R5Q7Z5H4 357 aa19.73■□□□□ 0.75
TOP3A-204ENST00000472959 MILR1Q7Z6M3 343 aa19.73■□□□□ 0.75
TOP3A-204ENST00000472959 DTWD1Q8N5C7 304 aa19.73■□□□□ 0.75
TOP3A-204ENST00000472959 OR9A4Q8NGU2 314 aa19.73■□□□□ 0.75
TOP3A-204ENST00000472959 UTP15Q8TED0 518 aaKnown RBP19.73■□□□□ 0.75
TOP3A-204ENST00000472959 TRPC4APQ8TEL6 797 aa19.73■□□□□ 0.75
TOP3A-204ENST00000472959 FAM111AQ96PZ2 611 aa19.73■□□□□ 0.75
TOP3A-204ENST00000472959 ZNF282Q9UDV7 671 aaPredicted RBP19.73■□□□□ 0.75
TOP3A-204ENST00000472959 MAP4K5Q9Y4K4 846 aa19.73■□□□□ 0.75
TOP3A-204ENST00000472959 CELSR3Q9NYQ7 3312 aa19.73■□□□□ 0.75
TOP3A-204ENST00000472959 EPG5Q9HCE0 2579 aa19.73■□□□□ 0.75
TOP3A-204ENST00000472959 MDC1Q14676 2089 aaKnown RBP19.72■□□□□ 0.75
TOP3A-204ENST00000472959 KLF7O75840 302 aaPredicted RBP19.72■□□□□ 0.75
TOP3A-204ENST00000472959 ZNF888P0CJ79 500 aaPredicted RBP19.72■□□□□ 0.75
TOP3A-204ENST00000472959 SMIM10L1P0DMW3 83 aa19.72■□□□□ 0.75
TOP3A-204ENST00000472959 PCNAP12004 261 aa19.72■□□□□ 0.75
TOP3A-204ENST00000472959 CXADRP78310 365 aa19.72■□□□□ 0.75
TOP3A-204ENST00000472959 PHEXP78562 749 aa19.72■□□□□ 0.75
TOP3A-204ENST00000472959 LCP2Q13094 533 aa19.72■□□□□ 0.75
TOP3A-204ENST00000472959 CPSF6Q16630 551 aaKnown RBP eCLIP19.72■□□□□ 0.75
TOP3A-204ENST00000472959 ADPRMQ3LIE5 342 aa19.72■□□□□ 0.75
TOP3A-204ENST00000472959 TOR1AIP1Q5JTV8 583 aa19.72■□□□□ 0.75
TOP3A-204ENST00000472959 RPS27LQ71UM5 84 aaKnown RBP19.72■□□□□ 0.75
TOP3A-204ENST00000472959 HDXQ7Z353 690 aa19.72■□□□□ 0.75
TOP3A-204ENST00000472959 CCNYL1Q8N7R7 359 aa19.72■□□□□ 0.75
TOP3A-204ENST00000472959 ZNF473Q8WTR7 871 aaKnown RBP19.72■□□□□ 0.75
TOP3A-204ENST00000472959 GAL3ST3Q96A11 431 aa19.72■□□□□ 0.75
TOP3A-204ENST00000472959 SMIM10Q96HG1 83 aa19.72■□□□□ 0.75
TOP3A-204ENST00000472959 PKNOX2Q96KN3 472 aa19.72■□□□□ 0.75
TOP3A-204ENST00000472959 CDK15Q96Q40 435 aa19.72■□□□□ 0.75
TOP3A-204ENST00000472959 ZNF382Q96SR6 550 aa19.72■□□□□ 0.75
TOP3A-204ENST00000472959 PRORYQ9H606 182 aa19.72■□□□□ 0.75
TOP3A-204ENST00000472959 CLK4Q9HAZ1 481 aaKnown RBP19.72■□□□□ 0.75
TOP3A-204ENST00000472959 SLC17A7Q9P2U7 560 aa19.72■□□□□ 0.75
TOP3A-204ENST00000472959 USP24Q9UPU5 2620 aa19.72■□□□□ 0.75
TOP3A-204ENST00000472959 MRPS18BQ9Y676 258 aaKnown RBP19.72■□□□□ 0.75
TOP3A-204ENST00000472959 IGLV3-12A0A075B6K2 115 aa19.71■□□□□ 0.75
TOP3A-204ENST00000472959 VSTM2BA6NLU5 285 aa19.71■□□□□ 0.75
TOP3A-204ENST00000472959 GALR3O60755 368 aaPredicted RBP19.71■□□□□ 0.75
TOP3A-204ENST00000472959 KLHL18O94889 574 aa19.71■□□□□ 0.75
TOP3A-204ENST00000472959 ATXN8OSP0DMR3 200 aa19.71■□□□□ 0.75
TOP3A-204ENST00000472959 IL1RNP18510 177 aa19.71■□□□□ 0.75
TOP3A-204ENST00000472959 NAGLUP54802 743 aa19.71■□□□□ 0.75
TOP3A-204ENST00000472959 OCA2Q04671 838 aa19.71■□□□□ 0.75
TOP3A-204ENST00000472959 TGM3Q08188 693 aa19.71■□□□□ 0.75
TOP3A-204ENST00000472959 PCLAFQ15004 111 aa19.71■□□□□ 0.75
TOP3A-204ENST00000472959 ZRSR2Q15696 482 aaKnown RBP19.71■□□□□ 0.75
TOP3A-204ENST00000472959 NKG7Q16617 165 aa19.71■□□□□ 0.75
TOP3A-204ENST00000472959 DEFB134Q4QY38 66 aa19.71■□□□□ 0.75
TOP3A-204ENST00000472959 TMEM35AQ53FP2 167 aa19.71■□□□□ 0.75
TOP3A-204ENST00000472959 CFAP157Q5JU67 520 aa19.71■□□□□ 0.75
TOP3A-204ENST00000472959 LIPMQ5VYY2 423 aa19.71■□□□□ 0.75
TOP3A-204ENST00000472959 ADNP2Q6IQ32 1131 aa19.71■□□□□ 0.75
TOP3A-204ENST00000472959 C19orf48Q6RUI8 117 aa19.71■□□□□ 0.75
TOP3A-204ENST00000472959 CHSY3Q70JA7 882 aa19.71■□□□□ 0.75
TOP3A-204ENST00000472959 C10orf107Q8IVU9 208 aa19.71■□□□□ 0.75
TOP3A-204ENST00000472959 AMER3Q8N944 861 aa19.71■□□□□ 0.75
TOP3A-204ENST00000472959 OR4F6Q8NGB9 312 aa19.71■□□□□ 0.75
TOP3A-204ENST00000472959 OR2Y1Q8NGV0 311 aa19.71■□□□□ 0.75
TOP3A-204ENST00000472959 HUS1BQ8NHY5 278 aa19.71■□□□□ 0.75
TOP3A-204ENST00000472959 MS4A6EQ96DS6 147 aa19.71■□□□□ 0.75
TOP3A-204ENST00000472959 CMTM7Q96FZ5 175 aa19.71■□□□□ 0.75
TOP3A-204ENST00000472959 REXO4Q9GZR2 422 aaKnown RBP19.71■□□□□ 0.75
TOP3A-204ENST00000472959 KLHL31Q9H511 634 aa19.71■□□□□ 0.75
TOP3A-204ENST00000472959 TMBIM4Q9HC24 238 aa19.71■□□□□ 0.75
TOP3A-204ENST00000472959 PRM3Q9NNZ6 103 aa19.71■□□□□ 0.75
TOP3A-204ENST00000472959 MKKSQ9NPJ1 570 aaPredicted RBP19.71■□□□□ 0.75
TOP3A-204ENST00000472959 PSD3Q9NYI0 1048 aa19.71■□□□□ 0.75
TOP3A-204ENST00000472959 TRPC4Q9UBN4 977 aa19.71■□□□□ 0.75
TOP3A-204ENST00000472959 PTRH2Q9Y3E5 179 aaKnown RBP19.71■□□□□ 0.75
TOP3A-204ENST00000472959 NAALAD2Q9Y3Q0 740 aa19.71■□□□□ 0.75
TOP3A-204ENST00000472959 A0A088AWK7 358 aa19.7■□□□□ 0.74
TOP3A-204ENST00000472959 H3BQF6 201 aa19.7■□□□□ 0.74
TOP3A-204ENST00000472959 SGK494L7N484 410 aa19.7■□□□□ 0.74
TOP3A-204ENST00000472959 FOXE1O00358 373 aaPredicted RBP19.7■□□□□ 0.74
TOP3A-204ENST00000472959 PPP6CO00743 305 aa19.7■□□□□ 0.74
TOP3A-204ENST00000472959 TM9SF1O15321 606 aa19.7■□□□□ 0.74
TOP3A-204ENST00000472959 NKX2-8O15522 239 aa19.7■□□□□ 0.74
TOP3A-204ENST00000472959 TRIM13O60858 407 aa19.7■□□□□ 0.74
TOP3A-204ENST00000472959 TBX6O95947 436 aaPredicted RBP19.7■□□□□ 0.74
TOP3A-204ENST00000472959 TSPAN8P19075 237 aa19.7■□□□□ 0.74
TOP3A-204ENST00000472959 ZNF10P21506 573 aaPredicted RBP19.7■□□□□ 0.74
TOP3A-204ENST00000472959 FOLR3P41439 243 aa19.7■□□□□ 0.74
TOP3A-204ENST00000472959 PKNOX1P55347 436 aa19.7■□□□□ 0.74
TOP3A-204ENST00000472959 RPS18P62269 152 aaKnown RBP19.7■□□□□ 0.74
TOP3A-204ENST00000472959 SNRPNP63162 240 aaKnown RBP19.7■□□□□ 0.74
TOP3A-204ENST00000472959 COL28A1Q2UY09 1125 aa19.7■□□□□ 0.74
TOP3A-204ENST00000472959 FRG2Q64ET8 278 aa19.7■□□□□ 0.74
TOP3A-204ENST00000472959 GPRIN3Q6ZVF9 776 aa19.7■□□□□ 0.74
TOP3A-204ENST00000472959 PRSS41Q7RTY9 318 aa19.7■□□□□ 0.74
TOP3A-204ENST00000472959 PDSS2Q86YH6 399 aa19.7■□□□□ 0.74
TOP3A-204ENST00000472959 SRFBP1Q8NEF9 429 aaKnown RBP19.7■□□□□ 0.74
TOP3A-204ENST00000472959 OR2L5Q8NG80 312 aa19.7■□□□□ 0.74
TOP3A-204ENST00000472959 SREK1Q8WXA9 508 aaKnown RBP19.7■□□□□ 0.74
TOP3A-204ENST00000472959 ZBTB9Q96C00 473 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms