RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 FOXA2Q9Y261 457 aaPredicted RBP2.49□□□□□ -2.01
XRN1-210ENST00000472697 KLHDC2Q9Y2U9 406 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 TMED5Q9Y3A6 229 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 OR2W1Q9Y3N9 320 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 CKAP5Q14008 2032 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 CRB1P82279 1406 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 HMCN1Q96RW7 5635 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 MAST3O60307 1309 aa2.49□□□□□ -2.01
XRN1-210ENST00000472697 SCN4AP35499 1836 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 TAF1LQ8IZX4 1826 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 KIAA0232Q92628 1395 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 TIAM2Q8IVF5 1701 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 A0A0G2JPF8 293 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 TMEM272A0A1B0GTI8 110 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 A0A1B0GUL7 405 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 HNRNPCL3B7ZW38 293 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 K7EQM0 130 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 KCNN4O15554 427 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 PAHP00439 452 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 HNRNPCL4P0DMR1 293 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 ITGB6P18564 788 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 HLA-FP30511 346 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 TNFSF10P50591 281 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 THOP1P52888 689 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 PROK1P58294 105 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 ZNF91Q05481 1191 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 LCP2Q13094 533 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 SCGB2A2Q13296 93 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 DHX34Q14147 1143 aaKnown RBP2.48□□□□□ -2.01
XRN1-210ENST00000472697 MXD4Q14582 209 aaPredicted RBP2.48□□□□□ -2.01
XRN1-210ENST00000472697 ALKBH6Q3KRA9 238 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 ADPRMQ3LIE5 342 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 ZNF542PQ5EBM4 170 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 PLEKHA7Q6IQ23 1121 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 TRMT1LQ7Z2T5 733 aaKnown RBP2.48□□□□□ -2.01
XRN1-210ENST00000472697 WDR53Q7Z5U6 358 aaPredicted RBP2.48□□□□□ -2.01
XRN1-210ENST00000472697 SPRED1Q7Z699 444 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 SFTPA2Q8IWL1 248 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 DSELQ8IZU8 1212 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 AADATQ8N5Z0 425 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 ARFGAP1Q8N6T3 406 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 RNF148Q8N7C7 305 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 OR4L1Q8NH43 312 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 UBLCP1Q8WVY7 318 aaPredicted RBP2.48□□□□□ -2.01
XRN1-210ENST00000472697 MARK4Q96L34 752 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 CFAP53Q96M91 514 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 C8orf49Q96NF6 230 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 SIGLEC11Q96RL6 698 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 CCNL2Q96S94 520 aaPredicted RBP2.48□□□□□ -2.01
XRN1-210ENST00000472697 ZNF607Q96SK3 696 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 CITED1Q99966 193 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 CDK19Q9BWU1 502 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 TMEM231Q9H6L2 316 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 RIOX1Q9H6W3 641 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 ZNF665Q9H7R5 613 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 SLC52A3Q9NQ40 469 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 C1RLQ9NZP8 487 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 IL17BQ9UHF5 180 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 MAD2L2Q9UI95 211 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 C5P01031 1676 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 ZNF831Q5JPB2 1677 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 DLEC1Q9Y238 1755 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 SERTM2A0A1B0GWG4 89 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 A0A1B0GWJ7 208 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 PIPSLA2A3N6 862 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 ANTXRLA6NF34 631 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 FAM47DPA6NHR8 397 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 CASTOR2A6NHX0 329 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 ARHGAP42A6NI28 874 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 C17orf105B2RV13 164 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 F8VVB4 439 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 F8VWA3 439 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 CYR61O00622 381 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 B4GAT1O43505 415 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 VPS26AO75436 327 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 KDM4BO94953 1096 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 CXCL10P02778 98 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 THRBP10828 461 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 RPS2P15880 293 aaKnown RBP2.48□□□□□ -2.01
XRN1-210ENST00000472697 SP100P23497 879 aaPredicted RBP2.48□□□□□ -2.01
XRN1-210ENST00000472697 MPGP29372 298 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 ADSSP30520 456 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 HNRNPH3P31942 346 aaKnown RBP2.48□□□□□ -2.01
XRN1-210ENST00000472697 PEX19P40855 299 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 MNDAP41218 407 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 TNNT2P45379 298 aaPredicted RBP2.48□□□□□ -2.01
XRN1-210ENST00000472697 MTIF2P46199 727 aaKnown RBP2.48□□□□□ -2.01
XRN1-210ENST00000472697 LBX1P52954 281 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 PPIAP62937 165 aaKnown RBP2.48□□□□□ -2.01
XRN1-210ENST00000472697 BNC1Q01954 994 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 FOXM1Q08050 763 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 DDX39BQ13838 428 aaKnown RBP2.48□□□□□ -2.01
XRN1-210ENST00000472697 GIT2Q14161 759 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 CERKLQ49MI3 558 aaPredicted RBP2.48□□□□□ -2.01
XRN1-210ENST00000472697 EARS2Q5JPH6 523 aaKnown RBP2.48□□□□□ -2.01
XRN1-210ENST00000472697 C6orf10Q5SRN2 563 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 FAM69BQ5VUD6 431 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 TCERG1LQ5VWI1 586 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 NCR3LG1Q68D85 454 aa2.48□□□□□ -2.01
XRN1-210ENST00000472697 ATL3Q6DD88 541 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms