RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 CASC4Q6P4E1 433 aa4.69□□□□□ -1.66
CLK1-209ENST00000472679 PODNL1Q6PEZ8 512 aa4.69□□□□□ -1.66
CLK1-209ENST00000472679 GDPGP1Q6ZNW5 385 aa4.69□□□□□ -1.66
CLK1-209ENST00000472679 MSANTD1Q6ZTZ1 278 aa4.69□□□□□ -1.66
CLK1-209ENST00000472679 MYPOPQ86VE0 399 aaPredicted RBP4.69□□□□□ -1.66
CLK1-209ENST00000472679 ANKRD46Q86W74 232 aa4.69□□□□□ -1.66
CLK1-209ENST00000472679 C4orf19Q8IY42 314 aa4.69□□□□□ -1.66
CLK1-209ENST00000472679 SLC22A15Q8IZD6 547 aa4.69□□□□□ -1.66
CLK1-209ENST00000472679 LRRC61Q9BV99 259 aa4.69□□□□□ -1.66
CLK1-209ENST00000472679 RPF1Q9H9Y2 349 aaKnown RBP4.69□□□□□ -1.66
CLK1-209ENST00000472679 EXOC1Q9NV70 894 aa4.69□□□□□ -1.66
CLK1-209ENST00000472679 TMOD3Q9NYL9 352 aa4.69□□□□□ -1.66
CLK1-209ENST00000472679 ARMCX3Q9UH62 379 aaPredicted RBP4.69□□□□□ -1.66
CLK1-209ENST00000472679 BAIAP2L1Q9UHR4 511 aa4.69□□□□□ -1.66
CLK1-209ENST00000472679 PLCL2Q9UPR0 1127 aa4.69□□□□□ -1.66
CLK1-209ENST00000472679 SATB2Q9UPW6 733 aa4.69□□□□□ -1.66
CLK1-209ENST00000472679 PCDHGA1Q9Y5H4 931 aa4.69□□□□□ -1.66
CLK1-209ENST00000472679 K7EQD1 137 aa4.68□□□□□ -1.66
CLK1-209ENST00000472679 NXPH4O95158 308 aa4.68□□□□□ -1.66
CLK1-209ENST00000472679 EDNRAP25101 427 aa4.68□□□□□ -1.66
CLK1-209ENST00000472679 CCND3P30281 292 aaPredicted RBP4.68□□□□□ -1.66
CLK1-209ENST00000472679 SOAT1P35610 550 aa4.68□□□□□ -1.66
CLK1-209ENST00000472679 NPBWR1P48145 328 aa4.68□□□□□ -1.66
CLK1-209ENST00000472679 LRRC37A5PQ49AS3 106 aa4.68□□□□□ -1.66
CLK1-209ENST00000472679 SPANXN4Q5MJ08 99 aa4.68□□□□□ -1.66
CLK1-209ENST00000472679 METTL7BQ6UX53 244 aa4.68□□□□□ -1.66
CLK1-209ENST00000472679 NHLRC1Q6VVB1 395 aa4.68□□□□□ -1.66
CLK1-209ENST00000472679 TRMT11Q7Z4G4 463 aaKnown RBP4.68□□□□□ -1.66
CLK1-209ENST00000472679 METTL4Q8N3J2 472 aa4.68□□□□□ -1.66
CLK1-209ENST00000472679 TEX26Q8N6G2 289 aa4.68□□□□□ -1.66
CLK1-209ENST00000472679 AMER3Q8N944 861 aa4.68□□□□□ -1.66
CLK1-209ENST00000472679 IL12RB2Q99665 862 aa4.68□□□□□ -1.66
CLK1-209ENST00000472679 PRMT1Q99873 361 aaKnown RBP4.68□□□□□ -1.66
CLK1-209ENST00000472679 MLPHQ9BV36 600 aaPredicted RBP4.68□□□□□ -1.66
CLK1-209ENST00000472679 ZWILCHQ9H900 591 aa4.68□□□□□ -1.66
CLK1-209ENST00000472679 SEPT10Q9P0V9 454 aa4.68□□□□□ -1.66
CLK1-209ENST00000472679 THAP10Q9P2Z0 257 aaPredicted RBP4.68□□□□□ -1.66
CLK1-209ENST00000472679 PCNX3Q9H6A9 2034 aa4.68□□□□□ -1.66
CLK1-209ENST00000472679 hCG_38984A0A1B0GV85 526 aa4.67□□□□□ -1.66
CLK1-209ENST00000472679 ILVBLA1L0T0 632 aa4.67□□□□□ -1.66
CLK1-209ENST00000472679 KBTBD13C9JR72 458 aa4.67□□□□□ -1.66
CLK1-209ENST00000472679 PI15O43692 258 aa4.67□□□□□ -1.66
CLK1-209ENST00000472679 C4BPBP20851 252 aa4.67□□□□□ -1.66
CLK1-209ENST00000472679 SRD5A2P31213 254 aa4.67□□□□□ -1.66
CLK1-209ENST00000472679 ABRQ12979 859 aa4.67□□□□□ -1.66
CLK1-209ENST00000472679 GLIPR1L2Q4G1C9 344 aa4.67□□□□□ -1.66
CLK1-209ENST00000472679 ZNF343Q6P1L6 599 aa4.67□□□□□ -1.66
CLK1-209ENST00000472679 LCLAT1Q6UWP7 414 aa4.67□□□□□ -1.66
CLK1-209ENST00000472679 ATAD1Q8NBU5 361 aa4.67□□□□□ -1.66
CLK1-209ENST00000472679 KIAA0895Q8NCT3 520 aa4.67□□□□□ -1.66
CLK1-209ENST00000472679 RPLP0P6Q8NHW5 317 aa4.67□□□□□ -1.66
CLK1-209ENST00000472679 CD99L2Q8TCZ2 262 aa4.67□□□□□ -1.66
CLK1-209ENST00000472679 MIPOL1Q8TD10 442 aa4.67□□□□□ -1.66
CLK1-209ENST00000472679 CHURC1Q8WUH1 139 aa4.67□□□□□ -1.66
CLK1-209ENST00000472679 ATG101Q9BSB4 218 aa4.67□□□□□ -1.66
CLK1-209ENST00000472679 DPEP2Q9H4A9 486 aa4.67□□□□□ -1.66
CLK1-209ENST00000472679 SLCO1C1Q9NYB5 712 aa4.67□□□□□ -1.66
CLK1-209ENST00000472679 CDH7Q9ULB5 785 aa4.67□□□□□ -1.66
CLK1-209ENST00000472679 GPR132Q9UNW8 380 aa4.67□□□□□ -1.66
CLK1-209ENST00000472679 IGHV3OR16-10A0A075B7F0 116 aa4.66□□□□□ -1.66
CLK1-209ENST00000472679 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.66□□□□□ -1.66
CLK1-209ENST00000472679 IGHV3-20A0A0C4DH32 117 aa4.66□□□□□ -1.66
CLK1-209ENST00000472679 A4D1N5 150 aa4.66□□□□□ -1.66
CLK1-209ENST00000472679 OOEPA6NGQ2 149 aa4.66□□□□□ -1.66
CLK1-209ENST00000472679 ANKDD1BA6NHY2 528 aa4.66□□□□□ -1.66
CLK1-209ENST00000472679 ZNF732B4DXR9 585 aa4.66□□□□□ -1.66
CLK1-209ENST00000472679 H0Y626 953 aa4.66□□□□□ -1.66
CLK1-209ENST00000472679 OR3A3P47888 321 aa4.66□□□□□ -1.66
CLK1-209ENST00000472679 ELAVL2Q12926 359 aaKnown RBP4.66□□□□□ -1.66
CLK1-209ENST00000472679 ZNF177Q13360 481 aaPredicted RBP4.66□□□□□ -1.66
CLK1-209ENST00000472679 GRB14Q14449 540 aa4.66□□□□□ -1.66
CLK1-209ENST00000472679 IQCCQ4KMZ1 466 aa4.66□□□□□ -1.66
CLK1-209ENST00000472679 PM20D1Q6GTS8 502 aa4.66□□□□□ -1.66
CLK1-209ENST00000472679 PAQR6Q6TCH4 344 aa4.66□□□□□ -1.66
CLK1-209ENST00000472679 OTOAQ7RTW8 1153 aa4.66□□□□□ -1.66
CLK1-209ENST00000472679 GTSCR1Q86UQ5 136 aa4.66□□□□□ -1.66
CLK1-209ENST00000472679 ZFAND4Q86XD8 727 aa4.66□□□□□ -1.66
CLK1-209ENST00000472679 DND1Q8IYX4 353 aaKnown RBP4.66□□□□□ -1.66
CLK1-209ENST00000472679 SMYD1Q8NB12 490 aa4.66□□□□□ -1.66
CLK1-209ENST00000472679 LURAP1Q96LR2 239 aa4.66□□□□□ -1.66
CLK1-209ENST00000472679 NACAP1Q9BZK3 213 aa4.66□□□□□ -1.66
CLK1-209ENST00000472679 PDRG1Q9NUG6 133 aa4.66□□□□□ -1.66
CLK1-209ENST00000472679 NLGN3Q9NZ94 848 aa4.66□□□□□ -1.66
CLK1-209ENST00000472679 MUTYHQ9UIF7 546 aa4.66□□□□□ -1.66
CLK1-209ENST00000472679 NKX6-3A6NJ46 265 aa4.65□□□□□ -1.67
CLK1-209ENST00000472679 TFECO14948 347 aaPredicted RBP4.65□□□□□ -1.67
CLK1-209ENST00000472679 SIGLEC5O15389 551 aa4.65□□□□□ -1.67
CLK1-209ENST00000472679 SLC7A4O43246 635 aa4.65□□□□□ -1.67
CLK1-209ENST00000472679 RPLP0P05388 317 aaKnown RBP4.65□□□□□ -1.67
CLK1-209ENST00000472679 AOC1P19801 751 aa4.65□□□□□ -1.67
CLK1-209ENST00000472679 SP100P23497 879 aaPredicted RBP4.65□□□□□ -1.67
CLK1-209ENST00000472679 CETN1Q12798 172 aa4.65□□□□□ -1.67
CLK1-209ENST00000472679 PPA1Q15181 289 aa4.65□□□□□ -1.67
CLK1-209ENST00000472679 MEP1BQ16820 701 aa4.65□□□□□ -1.67
CLK1-209ENST00000472679 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.65□□□□□ -1.67
CLK1-209ENST00000472679 C3P1Q6ZMU1 363 aa4.65□□□□□ -1.67
CLK1-209ENST00000472679 MACC1Q6ZN28 852 aa4.65□□□□□ -1.67
CLK1-209ENST00000472679 GBP6Q6ZN66 633 aa4.65□□□□□ -1.67
CLK1-209ENST00000472679 C17orf107Q6ZR85 190 aa4.65□□□□□ -1.67
CLK1-209ENST00000472679 C15orf52Q6ZUT6 534 aaKnown RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms