RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 ESRRAP11474 423 aaPredicted RBP12.16□□□□□ -0.46
TRAF4-208ENST00000469529 COX4I1P13073 169 aa12.16□□□□□ -0.46
TRAF4-208ENST00000469529 ST6GAL1P15907 406 aa12.16□□□□□ -0.46
TRAF4-208ENST00000469529 CKMT2P17540 419 aa12.16□□□□□ -0.46
TRAF4-208ENST00000469529 PRPS1L1P21108 318 aa12.16□□□□□ -0.46
TRAF4-208ENST00000469529 CDH3P22223 829 aa12.16□□□□□ -0.46
TRAF4-208ENST00000469529 ACP1P24666 158 aa12.16□□□□□ -0.46
TRAF4-208ENST00000469529 TIA1P31483 386 aaKnown RBP eCLIP12.16□□□□□ -0.46
TRAF4-208ENST00000469529 ZFP36L2P47974 494 aaKnown RBP12.16□□□□□ -0.46
TRAF4-208ENST00000469529 CLNS1AP54105 237 aaKnown RBP12.16□□□□□ -0.46
TRAF4-208ENST00000469529 PPP1CAP62136 330 aa12.16□□□□□ -0.46
TRAF4-208ENST00000469529 RGS1Q08116 209 aa12.16□□□□□ -0.46
TRAF4-208ENST00000469529 TGM3Q08188 693 aa12.16□□□□□ -0.46
TRAF4-208ENST00000469529 DDX39BQ13838 428 aaKnown RBP12.16□□□□□ -0.46
TRAF4-208ENST00000469529 CYLC2Q14093 348 aaPredicted RBP12.16□□□□□ -0.46
TRAF4-208ENST00000469529 RCAN2Q14206 197 aa12.16□□□□□ -0.46
TRAF4-208ENST00000469529 ABHD17CQ6PCB6 329 aa12.16□□□□□ -0.46
TRAF4-208ENST00000469529 COMMD6Q7Z4G1 85 aa12.16□□□□□ -0.46
TRAF4-208ENST00000469529 UBE3DQ7Z6J8 389 aa12.16□□□□□ -0.46
TRAF4-208ENST00000469529 TRIM73Q86UV7 250 aa12.16□□□□□ -0.46
TRAF4-208ENST00000469529 PLD3Q8IV08 490 aa12.16□□□□□ -0.46
TRAF4-208ENST00000469529 RNF175Q8N4F7 328 aa12.16□□□□□ -0.46
TRAF4-208ENST00000469529 C1orf52Q8N6N3 182 aaKnown RBP12.16□□□□□ -0.46
TRAF4-208ENST00000469529 ZNF655Q8N720 491 aaPredicted RBP12.16□□□□□ -0.46
TRAF4-208ENST00000469529 C19orf47Q8N9M1 422 aaKnown RBP12.16□□□□□ -0.46
TRAF4-208ENST00000469529 WDR48Q8TAF3 677 aa12.16□□□□□ -0.46
TRAF4-208ENST00000469529 NCSTNQ92542 709 aa12.16□□□□□ -0.46
TRAF4-208ENST00000469529 CCDC74AQ96AQ1 378 aa12.16□□□□□ -0.46
TRAF4-208ENST00000469529 TESCQ96BS2 214 aa12.16□□□□□ -0.46
TRAF4-208ENST00000469529 ZNF764Q96H86 408 aaPredicted RBP12.16□□□□□ -0.46
TRAF4-208ENST00000469529 SLC41A2Q96JW4 573 aa12.16□□□□□ -0.46
TRAF4-208ENST00000469529 F2RL3Q96RI0 385 aa12.16□□□□□ -0.46
TRAF4-208ENST00000469529 MAP3K3Q99759 626 aa12.16□□□□□ -0.46
TRAF4-208ENST00000469529 GTPBP2Q9BX10 602 aaKnown RBP12.16□□□□□ -0.46
TRAF4-208ENST00000469529 MRPL1Q9BYD6 325 aaKnown RBP12.16□□□□□ -0.46
TRAF4-208ENST00000469529 ROGDIQ9GZN7 287 aa12.16□□□□□ -0.46
TRAF4-208ENST00000469529 REXO4Q9GZR2 422 aaKnown RBP12.16□□□□□ -0.46
TRAF4-208ENST00000469529 PRDM9Q9NQV7 894 aa12.16□□□□□ -0.46
TRAF4-208ENST00000469529 PRDM7Q9NQW5 492 aa12.16□□□□□ -0.46
TRAF4-208ENST00000469529 DLGAP4Q9Y2H0 992 aa12.16□□□□□ -0.46
TRAF4-208ENST00000469529 SLC22A7Q9Y694 548 aa12.16□□□□□ -0.46
TRAF4-208ENST00000469529 PI4KAP42356 2102 aa12.16□□□□□ -0.46
TRAF4-208ENST00000469529 A0A1W2PP18 115 aa12.15□□□□□ -0.46
TRAF4-208ENST00000469529 DCDC2BA2VCK2 349 aa12.15□□□□□ -0.46
TRAF4-208ENST00000469529 SLC9B1P1A6NJY1 282 aa12.15□□□□□ -0.46
TRAF4-208ENST00000469529 BBIP1A8MTZ0 92 aa12.15□□□□□ -0.46
TRAF4-208ENST00000469529 H0YGG7 62 aa12.15□□□□□ -0.46
TRAF4-208ENST00000469529 NTN3O00634 580 aaPredicted RBP12.15□□□□□ -0.46
TRAF4-208ENST00000469529 MAP3K7O43318 606 aa12.15□□□□□ -0.46
TRAF4-208ENST00000469529 CPNE6O95741 557 aa12.15□□□□□ -0.46
TRAF4-208ENST00000469529 IL6P05231 212 aa12.15□□□□□ -0.46
TRAF4-208ENST00000469529 ANXA4P09525 319 aaPredicted RBP12.15□□□□□ -0.46
TRAF4-208ENST00000469529 SLC35G6P0C7Q6 338 aa12.15□□□□□ -0.46
TRAF4-208ENST00000469529 CD59P13987 128 aa12.15□□□□□ -0.46
TRAF4-208ENST00000469529 SDC1P18827 310 aa12.15□□□□□ -0.46
TRAF4-208ENST00000469529 PTPN4P29074 926 aa12.15□□□□□ -0.46
TRAF4-208ENST00000469529 HNRNPFP52597 415 aaKnown RBP12.15□□□□□ -0.46
TRAF4-208ENST00000469529 ARF3P61204 181 aaPredicted RBP12.15□□□□□ -0.46
TRAF4-208ENST00000469529 UFM1P61960 85 aa12.15□□□□□ -0.46
TRAF4-208ENST00000469529 DPY19L1Q2PZI1 675 aa12.15□□□□□ -0.46
TRAF4-208ENST00000469529 AGKQ53H12 422 aa12.15□□□□□ -0.46
TRAF4-208ENST00000469529 TCTE1Q5JU00 501 aa12.15□□□□□ -0.46
TRAF4-208ENST00000469529 OR4C11Q6IEV9 310 aa12.15□□□□□ -0.46
TRAF4-208ENST00000469529 MRM1Q6IN84 353 aaKnown RBP12.15□□□□□ -0.46
TRAF4-208ENST00000469529 TCEAL6Q6IPX3 200 aa12.15□□□□□ -0.46
TRAF4-208ENST00000469529 NIPAL1Q6NVV3 410 aa12.15□□□□□ -0.46
TRAF4-208ENST00000469529 IRGCQ6NXR0 463 aa12.15□□□□□ -0.46
TRAF4-208ENST00000469529 GUSBP11Q6P575 273 aa12.15□□□□□ -0.46
TRAF4-208ENST00000469529 PAOXQ6QHF9 649 aa12.15□□□□□ -0.46
TRAF4-208ENST00000469529 HACD2Q6Y1H2 254 aa12.15□□□□□ -0.46
TRAF4-208ENST00000469529 MSANTD1Q6ZTZ1 278 aa12.15□□□□□ -0.46
TRAF4-208ENST00000469529 IKBIPQ70UQ0 350 aa12.15□□□□□ -0.46
TRAF4-208ENST00000469529 ZNF771Q7L3S4 317 aaPredicted RBP12.15□□□□□ -0.46
TRAF4-208ENST00000469529 ARHGAP22Q7Z5H3 698 aa12.15□□□□□ -0.46
TRAF4-208ENST00000469529 CAMKMTQ7Z624 323 aa12.15□□□□□ -0.46
TRAF4-208ENST00000469529 MCATQ8IVS2 390 aaKnown RBP12.15□□□□□ -0.46
TRAF4-208ENST00000469529 D2HGDHQ8N465 521 aa12.15□□□□□ -0.46
TRAF4-208ENST00000469529 LIX1Q8N485 282 aa12.15□□□□□ -0.46
TRAF4-208ENST00000469529 ARHGEF39Q8N4T4 335 aa12.15□□□□□ -0.46
TRAF4-208ENST00000469529 OR4D9Q8NGE8 314 aa12.15□□□□□ -0.46
TRAF4-208ENST00000469529 OR2I1PQ8NGU4 316 aa12.15□□□□□ -0.46
TRAF4-208ENST00000469529 TCEAL3Q969E4 200 aa12.15□□□□□ -0.46
TRAF4-208ENST00000469529 SLC7A6OSQ96CW6 309 aaPredicted RBP12.15□□□□□ -0.46
TRAF4-208ENST00000469529 MTERF3Q96E29 417 aa12.15□□□□□ -0.46
TRAF4-208ENST00000469529 PPM1MQ96MI6 270 aa12.15□□□□□ -0.46
TRAF4-208ENST00000469529 KCNC2Q96PR1 638 aa12.15□□□□□ -0.46
TRAF4-208ENST00000469529 C1orf50Q9BV19 199 aa12.15□□□□□ -0.46
TRAF4-208ENST00000469529 AICDAQ9GZX7 198 aa12.15□□□□□ -0.46
TRAF4-208ENST00000469529 LRRN3Q9H3W5 708 aa12.15□□□□□ -0.46
TRAF4-208ENST00000469529 CLMPQ9H6B4 373 aa12.15□□□□□ -0.46
TRAF4-208ENST00000469529 SYNPO2LQ9H987 977 aa12.15□□□□□ -0.46
TRAF4-208ENST00000469529 ACTR5Q9H9F9 607 aaPredicted RBP12.15□□□□□ -0.46
TRAF4-208ENST00000469529 EFCAB1Q9HAE3 211 aa12.15□□□□□ -0.46
TRAF4-208ENST00000469529 FAM60AQ9NP50 221 aa12.15□□□□□ -0.46
TRAF4-208ENST00000469529 PDE7BQ9NP56 450 aa12.15□□□□□ -0.46
TRAF4-208ENST00000469529 LHX9Q9NQ69 397 aa12.15□□□□□ -0.46
TRAF4-208ENST00000469529 RXFP3Q9NSD7 469 aa12.15□□□□□ -0.46
TRAF4-208ENST00000469529 TAS2R7Q9NYW3 318 aa12.15□□□□□ -0.46
TRAF4-208ENST00000469529 PLCL2Q9UPR0 1127 aa12.15□□□□□ -0.46
TRAF4-208ENST00000469529 KLHL20Q9Y2M5 609 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms