RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 TBC1D20Q96BZ9 403 aa11.5□□□□□ -0.57
HDAC3-204ENST00000469207 SNF8Q96H20 258 aa11.5□□□□□ -0.57
HDAC3-204ENST00000469207 PCBD2Q9H0N5 130 aa11.5□□□□□ -0.57
HDAC3-204ENST00000469207 RHBGQ9H310 441 aa11.5□□□□□ -0.57
HDAC3-204ENST00000469207 KLHL31Q9H511 634 aa11.5□□□□□ -0.57
HDAC3-204ENST00000469207 NECTIN3Q9NQS3 549 aa11.5□□□□□ -0.57
HDAC3-204ENST00000469207 F8P00451 2351 aa11.49□□□□□ -0.57
HDAC3-204ENST00000469207 C4orf51C9J302 202 aa11.49□□□□□ -0.57
HDAC3-204ENST00000469207 NRDCO43847 1150 aa11.49□□□□□ -0.57
HDAC3-204ENST00000469207 SLC25A12O75746 678 aa11.49□□□□□ -0.57
HDAC3-204ENST00000469207 GUCA1CO95843 209 aa11.49□□□□□ -0.57
HDAC3-204ENST00000469207 TSPAN12O95859 305 aa11.49□□□□□ -0.57
HDAC3-204ENST00000469207 C8GP07360 202 aa11.49□□□□□ -0.57
HDAC3-204ENST00000469207 CYC1P08574 325 aa11.49□□□□□ -0.57
HDAC3-204ENST00000469207 SLC35G6P0C7Q6 338 aa11.49□□□□□ -0.57
HDAC3-204ENST00000469207 ALOX12P18054 663 aa11.49□□□□□ -0.57
HDAC3-204ENST00000469207 AGAP20933 346 aa11.49□□□□□ -0.57
HDAC3-204ENST00000469207 ITGA8P53708 1063 aa11.49□□□□□ -0.57
HDAC3-204ENST00000469207 DHX9Q08211 1270 aaKnown RBP11.49□□□□□ -0.57
HDAC3-204ENST00000469207 HP1BP3Q5SSJ5 553 aaPredicted RBP11.49□□□□□ -0.57
HDAC3-204ENST00000469207 UGT3A1Q6NUS8 523 aa11.49□□□□□ -0.57
HDAC3-204ENST00000469207 CCDC137Q6PK04 289 aaKnown RBP11.49□□□□□ -0.57
HDAC3-204ENST00000469207 IGDCC3Q8IVU1 814 aa11.49□□□□□ -0.57
HDAC3-204ENST00000469207 CEP97Q8IW35 865 aa11.49□□□□□ -0.57
HDAC3-204ENST00000469207 SLC5A8Q8N695 610 aa11.49□□□□□ -0.57
HDAC3-204ENST00000469207 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.49□□□□□ -0.57
HDAC3-204ENST00000469207 C2CD4AQ8NCU7 369 aaPredicted RBP11.49□□□□□ -0.57
HDAC3-204ENST00000469207 NFAM1Q8NET5 270 aaPredicted RBP11.49□□□□□ -0.57
HDAC3-204ENST00000469207 OR4K1Q8NGD4 311 aa11.49□□□□□ -0.57
HDAC3-204ENST00000469207 SREK1Q8WXA9 508 aaKnown RBP11.49□□□□□ -0.57
HDAC3-204ENST00000469207 SDCCAG3Q96C92 435 aa11.49□□□□□ -0.57
HDAC3-204ENST00000469207 LINGO1Q96FE5 620 aa11.49□□□□□ -0.57
HDAC3-204ENST00000469207 OR1F2PQ96R84 312 aa11.49□□□□□ -0.57
HDAC3-204ENST00000469207 AICDAQ9GZX7 198 aa11.49□□□□□ -0.57
HDAC3-204ENST00000469207 LIN28AQ9H9Z2 209 aaKnown RBP11.49□□□□□ -0.57
HDAC3-204ENST00000469207 GPAMQ9HCL2 828 aa11.49□□□□□ -0.57
HDAC3-204ENST00000469207 XAB2Q9HCS7 855 aaKnown RBP11.49□□□□□ -0.57
HDAC3-204ENST00000469207 HOMER3Q9NSC5 361 aa11.49□□□□□ -0.57
HDAC3-204ENST00000469207 COMMD10Q9Y6G5 202 aa11.49□□□□□ -0.57
HDAC3-204ENST00000469207 A0A1B0GTH9 108 aa11.48□□□□□ -0.57
HDAC3-204ENST00000469207 NME2P1O60361 137 aa11.48□□□□□ -0.57
HDAC3-204ENST00000469207 PRMT3O60678 531 aa11.48□□□□□ -0.57
HDAC3-204ENST00000469207 PDE9AO76083 593 aa11.48□□□□□ -0.57
HDAC3-204ENST00000469207 HIST1H2AGP0C0S8 130 aaPredicted RBP11.48□□□□□ -0.57
HDAC3-204ENST00000469207 CCDC175P0C221 793 aa11.48□□□□□ -0.57
HDAC3-204ENST00000469207 HIST1H2ADP20671 130 aa11.48□□□□□ -0.57
HDAC3-204ENST00000469207 NME2P22392 152 aa11.48□□□□□ -0.57
HDAC3-204ENST00000469207 GRK3P35626 688 aa11.48□□□□□ -0.57
HDAC3-204ENST00000469207 CYB561P49447 251 aa11.48□□□□□ -0.57
HDAC3-204ENST00000469207 CCR8P51685 355 aa11.48□□□□□ -0.57
HDAC3-204ENST00000469207 MLF1P58340 268 aa11.48□□□□□ -0.57
HDAC3-204ENST00000469207 TAS2R50P59544 299 aa11.48□□□□□ -0.57
HDAC3-204ENST00000469207 HERC3Q15034 1050 aa11.48□□□□□ -0.57
HDAC3-204ENST00000469207 MSS51Q4VC12 460 aa11.48□□□□□ -0.57
HDAC3-204ENST00000469207 C16orf47Q6ZP98 133 aaPredicted RBP11.48□□□□□ -0.57
HDAC3-204ENST00000469207 CEP128Q6ZU80 1094 aa11.48□□□□□ -0.57
HDAC3-204ENST00000469207 SULF2Q8IWU5 870 aa11.48□□□□□ -0.57
HDAC3-204ENST00000469207 PALM2Q8IXS6 379 aa11.48□□□□□ -0.57
HDAC3-204ENST00000469207 MYO1HQ8N1T3 1032 aa11.48□□□□□ -0.57
HDAC3-204ENST00000469207 GHDCQ8N2G8 530 aa11.48□□□□□ -0.57
HDAC3-204ENST00000469207 ANKRD53Q8N9V6 530 aa11.48□□□□□ -0.57
HDAC3-204ENST00000469207 ABHD11Q8NFV4 315 aa11.48□□□□□ -0.57
HDAC3-204ENST00000469207 OR56A3Q8NH54 315 aa11.48□□□□□ -0.57
HDAC3-204ENST00000469207 CALML6Q8TD86 181 aa11.48□□□□□ -0.57
HDAC3-204ENST00000469207 UTP15Q8TED0 518 aaKnown RBP11.48□□□□□ -0.57
HDAC3-204ENST00000469207 NEIL2Q969S2 332 aa11.48□□□□□ -0.57
HDAC3-204ENST00000469207 HIST1H2AHQ96KK5 128 aa11.48□□□□□ -0.57
HDAC3-204ENST00000469207 TSNARE1Q96NA8 513 aa11.48□□□□□ -0.57
HDAC3-204ENST00000469207 DMRTA2Q96SC8 542 aa11.48□□□□□ -0.57
HDAC3-204ENST00000469207 HIST1H2AJQ99878 128 aa11.48□□□□□ -0.57
HDAC3-204ENST00000469207 H2AFJQ9BTM1 129 aa11.48□□□□□ -0.57
HDAC3-204ENST00000469207 ARL15Q9NXU5 204 aa11.48□□□□□ -0.57
HDAC3-204ENST00000469207 TAS2R13Q9NYV9 303 aa11.48□□□□□ -0.57
HDAC3-204ENST00000469207 HIVEP1P15822 2718 aa11.47□□□□□ -0.57
HDAC3-204ENST00000469207 ANKRD17O75179 2603 aaKnown RBP11.47□□□□□ -0.57
HDAC3-204ENST00000469207 CACNA1CQ13936 2221 aa11.47□□□□□ -0.57
HDAC3-204ENST00000469207 A0A0G2JN53 185 aa11.47□□□□□ -0.57
HDAC3-204ENST00000469207 MYOCOSA0A1B0GUC4 107 aa11.47□□□□□ -0.57
HDAC3-204ENST00000469207 TRBC2A0A5B9 178 aa11.47□□□□□ -0.57
HDAC3-204ENST00000469207 EIF3FO00303 357 aaPredicted RBP11.47□□□□□ -0.57
HDAC3-204ENST00000469207 SLC16A5O15375 505 aa11.47□□□□□ -0.57
HDAC3-204ENST00000469207 HS6ST1O60243 411 aa11.47□□□□□ -0.57
HDAC3-204ENST00000469207 CDC40O60508 579 aaKnown RBP eCLIP11.47□□□□□ -0.57
HDAC3-204ENST00000469207 SMIM10L1P0DMW3 83 aa11.47□□□□□ -0.57
HDAC3-204ENST00000469207 ZNF24P17028 368 aa11.47□□□□□ -0.57
HDAC3-204ENST00000469207 IL10P22301 178 aa11.47□□□□□ -0.57
HDAC3-204ENST00000469207 SCTRP47872 440 aa11.47□□□□□ -0.57
HDAC3-204ENST00000469207 RGS4P49798 205 aa11.47□□□□□ -0.57
HDAC3-204ENST00000469207 MEOX1P50221 254 aa11.47□□□□□ -0.57
HDAC3-204ENST00000469207 GPR85P60893 370 aa11.47□□□□□ -0.57
HDAC3-204ENST00000469207 TLE4Q04727 773 aa11.47□□□□□ -0.57
HDAC3-204ENST00000469207 CSHL1Q14406 222 aa11.47□□□□□ -0.57
HDAC3-204ENST00000469207 CRYMQ14894 314 aa11.47□□□□□ -0.57
HDAC3-204ENST00000469207 ARMC3Q5W041 872 aa11.47□□□□□ -0.57
HDAC3-204ENST00000469207 DUPD1Q68J44 220 aa11.47□□□□□ -0.57
HDAC3-204ENST00000469207 MEX3BQ6ZN04 569 aaKnown RBP11.47□□□□□ -0.57
HDAC3-204ENST00000469207 ZNF662Q6ZS27 426 aa11.47□□□□□ -0.57
HDAC3-204ENST00000469207 MDGA2Q7Z553 956 aa11.47□□□□□ -0.57
HDAC3-204ENST00000469207 LMNTD2Q8IXW0 634 aa11.47□□□□□ -0.57
HDAC3-204ENST00000469207 RASGEF1CQ8N431 466 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms