RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 FOXE1O00358 373 aaPredicted RBP8.12□□□□□ -1.11
SSBP1-208ENST00000469123 PEX12O00623 359 aa8.12□□□□□ -1.11
SSBP1-208ENST00000469123 CTIFO43310 598 aaKnown RBP8.12□□□□□ -1.11
SSBP1-208ENST00000469123 FOXS1O43638 330 aa8.12□□□□□ -1.11
SSBP1-208ENST00000469123 PLIN3O60664 434 aa8.12□□□□□ -1.11
SSBP1-208ENST00000469123 KLF7O75840 302 aaPredicted RBP8.12□□□□□ -1.11
SSBP1-208ENST00000469123 KLHL18O94889 574 aa8.12□□□□□ -1.11
SSBP1-208ENST00000469123 CLDN9O95484 217 aa8.12□□□□□ -1.11
SSBP1-208ENST00000469123 PROCP04070 461 aa8.12□□□□□ -1.11
SSBP1-208ENST00000469123 SERPIND1P05546 499 aa8.12□□□□□ -1.11
SSBP1-208ENST00000469123 ENO1P06733 434 aaKnown RBP8.12□□□□□ -1.11
SSBP1-208ENST00000469123 CTSBP07858 339 aa8.12□□□□□ -1.11
SSBP1-208ENST00000469123 EPORP19235 508 aa8.12□□□□□ -1.11
SSBP1-208ENST00000469123 JAK1P23458 1154 aa8.12□□□□□ -1.11
SSBP1-208ENST00000469123 F8A1P23610 371 aa8.12□□□□□ -1.11
SSBP1-208ENST00000469123 MMP11P24347 488 aa8.12□□□□□ -1.11
SSBP1-208ENST00000469123 VARSP26640 1264 aaKnown RBP8.12□□□□□ -1.11
SSBP1-208ENST00000469123 GMPRP36959 345 aa8.12□□□□□ -1.11
SSBP1-208ENST00000469123 ARL1P40616 181 aaPredicted RBP8.12□□□□□ -1.11
SSBP1-208ENST00000469123 PKNOX1P55347 436 aa8.12□□□□□ -1.11
SSBP1-208ENST00000469123 DNAJB13P59910 316 aa8.12□□□□□ -1.11
SSBP1-208ENST00000469123 MEF2AQ02078 507 aaPredicted RBP8.12□□□□□ -1.11
SSBP1-208ENST00000469123 ZNF844Q08AG5 666 aa8.12□□□□□ -1.11
SSBP1-208ENST00000469123 IFT88Q13099 833 aa8.12□□□□□ -1.11
SSBP1-208ENST00000469123 SLC9A5Q14940 896 aa8.12□□□□□ -1.11
SSBP1-208ENST00000469123 NKG7Q16617 165 aa8.12□□□□□ -1.11
SSBP1-208ENST00000469123 ZNF678Q5SXM1 525 aa8.12□□□□□ -1.11
SSBP1-208ENST00000469123 BEND6Q5SZJ8 279 aaPredicted RBP8.12□□□□□ -1.11
SSBP1-208ENST00000469123 FAM199XQ6PEV8 388 aaPredicted RBP8.12□□□□□ -1.11
SSBP1-208ENST00000469123 BORAQ6PGQ7 559 aa8.12□□□□□ -1.11
SSBP1-208ENST00000469123 ZYG11AQ6WRX3 759 aa8.12□□□□□ -1.11
SSBP1-208ENST00000469123 MED25Q71SY5 747 aa8.12□□□□□ -1.11
SSBP1-208ENST00000469123 SRRM1Q8IYB3 904 aaKnown RBP8.12□□□□□ -1.11
SSBP1-208ENST00000469123 CYP4X1Q8N118 509 aa8.12□□□□□ -1.11
SSBP1-208ENST00000469123 TMEM102Q8N9M5 508 aaPredicted RBP8.12□□□□□ -1.11
SSBP1-208ENST00000469123 ANKRD53Q8N9V6 530 aa8.12□□□□□ -1.11
SSBP1-208ENST00000469123 CCDC63Q8NA47 563 aa8.12□□□□□ -1.11
SSBP1-208ENST00000469123 ZNF740Q8NDX6 193 aa8.12□□□□□ -1.11
SSBP1-208ENST00000469123 OR2L5Q8NG80 312 aa8.12□□□□□ -1.11
SSBP1-208ENST00000469123 OR2W6PQ8NHA6 318 aa8.12□□□□□ -1.11
SSBP1-208ENST00000469123 ZNF483Q8TF39 744 aaPredicted RBP8.12□□□□□ -1.11
SSBP1-208ENST00000469123 APOBEC4Q8WW27 367 aaKnown RBP8.12□□□□□ -1.11
SSBP1-208ENST00000469123 CCT6BQ92526 530 aa8.12□□□□□ -1.11
SSBP1-208ENST00000469123 ESAMQ96AP7 390 aa8.12□□□□□ -1.11
SSBP1-208ENST00000469123 CMTM7Q96FZ5 175 aa8.12□□□□□ -1.11
SSBP1-208ENST00000469123 PGM2Q96G03 612 aa8.12□□□□□ -1.11
SSBP1-208ENST00000469123 FER1L6-AS2Q96M78 137 aa8.12□□□□□ -1.11
SSBP1-208ENST00000469123 KCNC2Q96PR1 638 aa8.12□□□□□ -1.11
SSBP1-208ENST00000469123 ZNF382Q96SR6 550 aa8.12□□□□□ -1.11
SSBP1-208ENST00000469123 TRMOQ9BU70 441 aa8.12□□□□□ -1.11
SSBP1-208ENST00000469123 SLC29A3Q9BZD2 475 aa8.12□□□□□ -1.11
SSBP1-208ENST00000469123 REXO4Q9GZR2 422 aaKnown RBP8.12□□□□□ -1.11
SSBP1-208ENST00000469123 NOL11Q9H8H0 719 aaKnown RBP8.12□□□□□ -1.11
SSBP1-208ENST00000469123 PRM3Q9NNZ6 103 aa8.12□□□□□ -1.11
SSBP1-208ENST00000469123 TRPC4Q9UBN4 977 aa8.12□□□□□ -1.11
SSBP1-208ENST00000469123 SNX6Q9UNH7 406 aa8.12□□□□□ -1.11
SSBP1-208ENST00000469123 LHX6Q9UPM6 363 aa8.12□□□□□ -1.11
SSBP1-208ENST00000469123 PLLPQ9Y342 182 aa8.12□□□□□ -1.11
SSBP1-208ENST00000469123 PTRH2Q9Y3E5 179 aaKnown RBP8.12□□□□□ -1.11
SSBP1-208ENST00000469123 ASB1Q9Y576 335 aa8.12□□□□□ -1.11
SSBP1-208ENST00000469123 NUP210LQ5VU65 1888 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 DSPP15924 2871 aaKnown RBP8.11□□□□□ -1.11
SSBP1-208ENST00000469123 A0A0A6YYC8 382 aaPredicted RBP8.11□□□□□ -1.11
SSBP1-208ENST00000469123 CDC14CA4D256 554 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 LRIT2A6NDA9 550 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 I3L1I5 382 aaPredicted RBP8.11□□□□□ -1.11
SSBP1-208ENST00000469123 TM9SF1O15321 606 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 DLX3O60479 287 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 GALR3O60755 368 aaPredicted RBP8.11□□□□□ -1.11
SSBP1-208ENST00000469123 SUPT7LO94864 414 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 SEMA3DO95025 777 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 SNUPNO95149 360 aaKnown RBP8.11□□□□□ -1.11
SSBP1-208ENST00000469123 SIX3O95343 332 aaPredicted RBP8.11□□□□□ -1.11
SSBP1-208ENST00000469123 KRT6AP02538 564 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 KRT6BP04259 564 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 SBK3P0C264 359 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 ZGLP1P0C6A0 271 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 SMIM10L1P0DMW3 83 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 RNH1P13489 461 aaKnown RBP8.11□□□□□ -1.11
SSBP1-208ENST00000469123 HSD3B1P14060 373 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 CPA3P15088 417 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 IL1RNP18510 177 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 CD22P20273 847 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 PTX3P26022 381 aaPredicted RBP8.11□□□□□ -1.11
SSBP1-208ENST00000469123 HSD3B2P26439 372 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 SERPINB5P36952 375 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 CCR10P46092 362 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 OR1D4P47884 311 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 KRT6CP48668 564 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 CYP4F2P78329 520 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 CLCQ05315 142 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 LCP2Q13094 533 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 CUL3Q13618 768 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 FBXO48Q5FWF7 155 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 TOR1AIP1Q5JTV8 583 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 CFAP157Q5JU67 520 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 CEP85LQ5SZL2 805 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 LIPMQ5VYY2 423 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 LCN10Q6JVE6 187 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 C19orf48Q6RUI8 117 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms