RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 FAM111BQ6SJ93 734 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 KLHL17Q6TDP4 642 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 AFTPHQ6ULP2 937 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 DPP8Q6V1X1 898 aaPredicted RBP4.69□□□□□ -1.66
SF3B1-207ENST00000468925 CFAP77Q6ZQR2 320 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 C15orf39Q6ZRI6 1047 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 FAM183BPQ6ZVS7 135 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 LARP4Q71RC2 724 aaKnown RBP eCLIP4.69□□□□□ -1.66
SF3B1-207ENST00000468925 BTN2A1Q7KYR7 527 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 CHST15Q7LFX5 561 aaPredicted RBP4.69□□□□□ -1.66
SF3B1-207ENST00000468925 SNX20Q7Z614 316 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 ADGRD2Q7Z7M1 963 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 SNX29P2Q8IUI4 249 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 SLC41A1Q8IVJ1 513 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 CCDC117Q8IWD4 279 aaPredicted RBP4.69□□□□□ -1.66
SF3B1-207ENST00000468925 ADGRF4Q8IZF3 695 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 SPAG16Q8N0X2 631 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 ATPAF2Q8N5M1 289 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 ZNF565Q8N9K5 539 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 ATG16L2Q8NAA4 619 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 PLA2G15Q8NCC3 412 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 SLC37A3Q8NCC5 494 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 FAM156AQ8NDB6 213 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 OR4M2Q8NGB6 313 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 OR4M1Q8NGD0 313 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 OR6M1Q8NGM8 313 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 GPR151Q8TDV0 419 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 CPNE4Q96A23 557 aaPredicted RBP4.69□□□□□ -1.66
SF3B1-207ENST00000468925 RAB7BQ96AH8 199 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 TMEM125Q96AQ2 219 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 TSPAN17Q96FV3 270 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 CDKN2AIPNLQ96HQ2 116 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 FAM167AQ96KS9 214 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 PPM1MQ96MI6 270 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 TEPSINQ96N21 525 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 ZNF285Q96NJ3 590 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 MCEEQ96PE7 176 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 RNF157Q96PX1 679 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 OR2M2Q96R28 347 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 SIGLEC11Q96RL6 698 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 GPR22Q99680 433 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 PITX2Q99697 317 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 NPAS1Q99742 590 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 C7orf50Q9BRJ6 194 aaKnown RBP4.69□□□□□ -1.66
SF3B1-207ENST00000468925 SEC22CQ9BRL7 303 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 MED18Q9BUE0 208 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 ZDHHC5Q9C0B5 715 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 TWSG1Q9GZX9 223 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 LMAN2LQ9H0V9 348 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 MED28Q9H204 178 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 PPIL3Q9H2H8 161 aaKnown RBP4.69□□□□□ -1.66
SF3B1-207ENST00000468925 SAV1Q9H4B6 383 aaPredicted RBP4.69□□□□□ -1.66
SF3B1-207ENST00000468925 RHOJQ9H4E5 214 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 MROH8Q9H579 483 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 ELOVL6Q9H5J4 265 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 TASP1Q9H6P5 420 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 TDRD3Q9H7E2 651 aaKnown RBP4.69□□□□□ -1.66
SF3B1-207ENST00000468925 MCCC2Q9HCC0 563 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 TLR9Q9NR96 1032 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 SDR39U1Q9NRG7 319 aaPredicted RBP4.69□□□□□ -1.66
SF3B1-207ENST00000468925 ANKEF1Q9NU02 776 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 FAM86C1Q9NVL1 165 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 SDHAF2Q9NX18 166 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 RBAKQ9NYW8 714 aaPredicted RBP4.69□□□□□ -1.66
SF3B1-207ENST00000468925 GGA3Q9NZ52 723 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 CNOT2Q9NZN8 540 aaKnown RBP4.69□□□□□ -1.66
SF3B1-207ENST00000468925 RCOR3Q9P2K3 495 aaPredicted RBP4.69□□□□□ -1.66
SF3B1-207ENST00000468925 CTSFQ9UBX1 484 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 AFF4Q9UHB7 1163 aaKnown RBP4.69□□□□□ -1.66
SF3B1-207ENST00000468925 TRMT112Q9UI30 125 aaKnown RBP4.69□□□□□ -1.66
SF3B1-207ENST00000468925 SCP2D1Q9UJQ7 156 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 PCDHB10Q9UN67 800 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 MAGED2Q9UNF1 606 aaPredicted RBP4.69□□□□□ -1.66
SF3B1-207ENST00000468925 MAN2B2Q9Y2E5 1009 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 PADI2Q9Y2J8 665 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 GPR52Q9Y2T5 361 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 POLR3KQ9Y2Y1 108 aaPredicted RBP4.69□□□□□ -1.66
SF3B1-207ENST00000468925 ASB1Q9Y576 335 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 PCDHA1Q9Y5I3 950 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 TNS2Q63HR2 1409 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 LTBP3Q9NS15 1303 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 DOT1LQ8TEK3 1739 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 PCM1Q15154 2024 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 SYNJ2BP-COX16A0A087WUM0 186 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 A0A1B0GVC2 190 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 FAM149AA5PLN7 773 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 TRAPPC13A5PLN9 417 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 ZNF729A6NN14 1252 aaPredicted RBP4.68□□□□□ -1.66
SF3B1-207ENST00000468925 LACTBL1A8MY62 500 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 TARM1B6A8C7 271 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 F8VP50 259 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 K7ESF4 209 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 M0R233 179 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 UPK1AO00322 258 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 ARNTLO00327 626 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 DSCR3O14972 297 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 ANKRD28O15084 1053 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 MDM4O15151 490 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 MSH4O15457 936 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 SLC28A2O43868 658 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms