RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 HCN1O60741 890 aa9.49□□□□□ -0.89
HDAC3-203ENST00000467533 SIX3O95343 332 aaPredicted RBP9.49□□□□□ -0.89
HDAC3-203ENST00000467533 IL2RAP01589 272 aa9.49□□□□□ -0.89
HDAC3-203ENST00000467533 FHP07954 510 aa9.49□□□□□ -0.89
HDAC3-203ENST00000467533 FAM228BP0C875 321 aa9.49□□□□□ -0.89
HDAC3-203ENST00000467533 ENDOUP21128 410 aaKnown RBP9.49□□□□□ -0.89
HDAC3-203ENST00000467533 IL10P22301 178 aa9.49□□□□□ -0.89
HDAC3-203ENST00000467533 JAK1P23458 1154 aa9.49□□□□□ -0.89
HDAC3-203ENST00000467533 AOAHP28039 575 aa9.49□□□□□ -0.89
HDAC3-203ENST00000467533 RBL1P28749 1068 aa9.49□□□□□ -0.89
HDAC3-203ENST00000467533 CEACAM8P31997 349 aaPredicted RBP9.49□□□□□ -0.89
HDAC3-203ENST00000467533 CLCN2P51788 898 aa9.49□□□□□ -0.89
HDAC3-203ENST00000467533 ZNF136P52737 540 aa9.49□□□□□ -0.89
HDAC3-203ENST00000467533 MYL5Q02045 173 aa9.49□□□□□ -0.89
HDAC3-203ENST00000467533 HYAL2Q12891 473 aa9.49□□□□□ -0.89
HDAC3-203ENST00000467533 ACKR1Q16570 336 aa9.49□□□□□ -0.89
HDAC3-203ENST00000467533 KCTD11Q693B1 232 aa9.49□□□□□ -0.89
HDAC3-203ENST00000467533 TMEM214Q6NUQ4 689 aaKnown RBP9.49□□□□□ -0.89
HDAC3-203ENST00000467533 ALKBH5Q6P6C2 394 aaKnown RBP9.49□□□□□ -0.89
HDAC3-203ENST00000467533 IL20RBQ6UXL0 311 aa9.49□□□□□ -0.89
HDAC3-203ENST00000467533 PDSS2Q86YH6 399 aa9.49□□□□□ -0.89
HDAC3-203ENST00000467533 GPALPP1Q8IXQ4 340 aa9.49□□□□□ -0.89
HDAC3-203ENST00000467533 OR5T3Q8NGG3 340 aa9.49□□□□□ -0.89
HDAC3-203ENST00000467533 PPP1R14CQ8TAE6 165 aa9.49□□□□□ -0.89
HDAC3-203ENST00000467533 CTNNBL1Q8WYA6 563 aaPredicted RBP9.49□□□□□ -0.89
HDAC3-203ENST00000467533 PTCHD1Q96NR3 888 aa9.49□□□□□ -0.89
HDAC3-203ENST00000467533 MACROD1Q9BQ69 325 aa9.49□□□□□ -0.89
HDAC3-203ENST00000467533 FAM173AQ9BQD7 235 aa9.49□□□□□ -0.89
HDAC3-203ENST00000467533 C10orf88Q9H8K7 445 aa9.49□□□□□ -0.89
HDAC3-203ENST00000467533 DDX56Q9NY93 547 aaKnown RBP9.49□□□□□ -0.89
HDAC3-203ENST00000467533 R3HDM2Q9Y2K5 976 aaKnown RBP9.49□□□□□ -0.89
HDAC3-203ENST00000467533 NAALAD2Q9Y3Q0 740 aa9.49□□□□□ -0.89
HDAC3-203ENST00000467533 NPFFR2Q9Y5X5 522 aa9.49□□□□□ -0.89
HDAC3-203ENST00000467533 KIAA1549Q9HCM3 1950 aa9.49□□□□□ -0.89
HDAC3-203ENST00000467533 ANK3Q12955 4377 aaKnown RBP9.49□□□□□ -0.89
HDAC3-203ENST00000467533 A0A087X1B8 175 aa9.48□□□□□ -0.89
HDAC3-203ENST00000467533 LRRC10BA6NIK2 292 aa9.48□□□□□ -0.89
HDAC3-203ENST00000467533 KDM4EB2RXH2 506 aaPredicted RBP9.48□□□□□ -0.89
HDAC3-203ENST00000467533 H7C0C1 242 aa9.48□□□□□ -0.89
HDAC3-203ENST00000467533 TLX2O43763 284 aaPredicted RBP9.48□□□□□ -0.89
HDAC3-203ENST00000467533 B4GALT2O60909 372 aa9.48□□□□□ -0.89
HDAC3-203ENST00000467533 H2AFZP0C0S5 128 aa9.48□□□□□ -0.89
HDAC3-203ENST00000467533 ERGP11308 486 aa9.48□□□□□ -0.89
HDAC3-203ENST00000467533 CDKN2BP42772 138 aa9.48□□□□□ -0.89
HDAC3-203ENST00000467533 ATP5OP48047 213 aa9.48□□□□□ -0.89
HDAC3-203ENST00000467533 AGFG1P52594 562 aaKnown RBP9.48□□□□□ -0.89
HDAC3-203ENST00000467533 NR1H2P55055 460 aa9.48□□□□□ -0.89
HDAC3-203ENST00000467533 PRDX1Q06830 199 aaKnown RBP9.48□□□□□ -0.89
HDAC3-203ENST00000467533 TNK1Q13470 666 aa9.48□□□□□ -0.89
HDAC3-203ENST00000467533 SLC10A1Q14973 349 aa9.48□□□□□ -0.89
HDAC3-203ENST00000467533 SIX1Q15475 284 aaPredicted RBP9.48□□□□□ -0.89
HDAC3-203ENST00000467533 ACSF3Q4G176 576 aaPredicted RBP9.48□□□□□ -0.89
HDAC3-203ENST00000467533 POMZP3Q6PJE2 187 aa9.48□□□□□ -0.89
HDAC3-203ENST00000467533 AFTPHQ6ULP2 937 aa9.48□□□□□ -0.89
HDAC3-203ENST00000467533 C20orf204Q6ZNR8 217 aa9.48□□□□□ -0.89
HDAC3-203ENST00000467533 KIAA0408Q6ZU52 694 aa9.48□□□□□ -0.89
HDAC3-203ENST00000467533 FAM47EQ6ZV65 393 aa9.48□□□□□ -0.89
HDAC3-203ENST00000467533 H2AFVQ71UI9 128 aa9.48□□□□□ -0.89
HDAC3-203ENST00000467533 VN1R4Q7Z5H5 301 aa9.48□□□□□ -0.89
HDAC3-203ENST00000467533 LACC1Q8IV20 430 aa9.48□□□□□ -0.89
HDAC3-203ENST00000467533 PPFIBP2Q8ND30 876 aa9.48□□□□□ -0.89
HDAC3-203ENST00000467533 NFAM1Q8NET5 270 aaPredicted RBP9.48□□□□□ -0.89
HDAC3-203ENST00000467533 OR9A1PQ8NGU1 263 aa9.48□□□□□ -0.89
HDAC3-203ENST00000467533 ISL2Q96A47 359 aa9.48□□□□□ -0.89
HDAC3-203ENST00000467533 TBC1D20Q96BZ9 403 aa9.48□□□□□ -0.89
HDAC3-203ENST00000467533 HSPBAP1Q96EW2 488 aa9.48□□□□□ -0.89
HDAC3-203ENST00000467533 CCDC138Q96M89 665 aa9.48□□□□□ -0.89
HDAC3-203ENST00000467533 EBNA1BP2Q99848 306 aaKnown RBP9.48□□□□□ -0.89
HDAC3-203ENST00000467533 FERMT1Q9BQL6 677 aa9.48□□□□□ -0.89
HDAC3-203ENST00000467533 CCDC77Q9BR77 488 aa9.48□□□□□ -0.89
HDAC3-203ENST00000467533 EPB41L4BQ9H329 900 aa9.48□□□□□ -0.89
HDAC3-203ENST00000467533 ARNT2Q9HBZ2 717 aa9.48□□□□□ -0.89
HDAC3-203ENST00000467533 C6orf203Q9P0P8 240 aaPredicted RBP9.48□□□□□ -0.89
HDAC3-203ENST00000467533 SAMD15Q9P1V8 674 aa9.48□□□□□ -0.89
HDAC3-203ENST00000467533 YARS2Q9Y2Z4 477 aaKnown RBP9.48□□□□□ -0.89
HDAC3-203ENST00000467533 BZW2Q9Y6E2 419 aaKnown RBP9.48□□□□□ -0.89
HDAC3-203ENST00000467533 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.48□□□□□ -0.89
HDAC3-203ENST00000467533 RAI1Q7Z5J4 1906 aaPredicted RBP9.48□□□□□ -0.89
HDAC3-203ENST00000467533 MEGF8Q7Z7M0 2845 aa9.48□□□□□ -0.89
HDAC3-203ENST00000467533 DSCAMO60469 2012 aa9.48□□□□□ -0.89
HDAC3-203ENST00000467533 CR1P17927 2039 aa9.48□□□□□ -0.89
HDAC3-203ENST00000467533 NCKAP5O14513 1909 aa9.47□□□□□ -0.89
HDAC3-203ENST00000467533 RNF223E7ERA6 249 aa9.47□□□□□ -0.89
HDAC3-203ENST00000467533 KCNAB3O43448 404 aa9.47□□□□□ -0.89
HDAC3-203ENST00000467533 SPRY1O43609 319 aaPredicted RBP9.47□□□□□ -0.89
HDAC3-203ENST00000467533 OR2J2O76002 312 aa9.47□□□□□ -0.89
HDAC3-203ENST00000467533 OR6B1O95007 311 aa9.47□□□□□ -0.89
HDAC3-203ENST00000467533 FAM157CP0CG43 387 aa9.47□□□□□ -0.89
HDAC3-203ENST00000467533 CNR1P21554 472 aa9.47□□□□□ -0.89
HDAC3-203ENST00000467533 TIMP3P35625 211 aa9.47□□□□□ -0.89
HDAC3-203ENST00000467533 SOX3P41225 446 aa9.47□□□□□ -0.89
HDAC3-203ENST00000467533 CPA2P48052 419 aa9.47□□□□□ -0.89
HDAC3-203ENST00000467533 DNASE1L1P49184 302 aa9.47□□□□□ -0.89
HDAC3-203ENST00000467533 RPS15AP62244 130 aaKnown RBP9.47□□□□□ -0.89
HDAC3-203ENST00000467533 OLR1P78380 273 aa9.47□□□□□ -0.89
HDAC3-203ENST00000467533 ABATP80404 500 aa9.47□□□□□ -0.89
HDAC3-203ENST00000467533 MEF2AQ02078 507 aaPredicted RBP9.47□□□□□ -0.89
HDAC3-203ENST00000467533 RELAQ04206 551 aa9.47□□□□□ -0.89
HDAC3-203ENST00000467533 ANKRD20A2Q5SQ80 823 aa9.47□□□□□ -0.89
HDAC3-203ENST00000467533 THEMIS2Q5TEJ8 643 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms