RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, human

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DNMT3A-208	ENST00000466601	SYVN1	Q86TM6	617 aa		13.73	□□□□□ -0.21
DNMT3A-208	ENST00000466601	AFAP1L2	Q8N4X5	818 aa		13.73	□□□□□ -0.21
DNMT3A-208	ENST00000466601	GOLGA6L1	Q8N7Z2	621 aa		13.73	□□□□□ -0.21
DNMT3A-208	ENST00000466601	OR9A4	Q8NGU2	314 aa		13.73	□□□□□ -0.21
DNMT3A-208	ENST00000466601	HUS1B	Q8NHY5	278 aa		13.73	□□□□□ -0.21
DNMT3A-208	ENST00000466601	WDR20	Q8TBZ3	569 aa		13.73	□□□□□ -0.21
DNMT3A-208	ENST00000466601	UTP15	Q8TED0	518 aa	Known RBP	13.73	□□□□□ -0.21
DNMT3A-208	ENST00000466601	SREK1	Q8WXA9	508 aa	Known RBP	13.73	□□□□□ -0.21
DNMT3A-208	ENST00000466601	COL26A1	Q96A83	441 aa		13.73	□□□□□ -0.21
DNMT3A-208	ENST00000466601	PKNOX2	Q96KN3	472 aa		13.73	□□□□□ -0.21
DNMT3A-208	ENST00000466601	SH3GL2	Q99962	352 aa		13.73	□□□□□ -0.21
DNMT3A-208	ENST00000466601	GPR87	Q9BY21	358 aa		13.73	□□□□□ -0.21
DNMT3A-208	ENST00000466601	AICDA	Q9GZX7	198 aa		13.73	□□□□□ -0.21
DNMT3A-208	ENST00000466601	KLHL31	Q9H511	634 aa		13.73	□□□□□ -0.21
DNMT3A-208	ENST00000466601	TRPS1	Q9UHF7	1281 aa		13.73	□□□□□ -0.21
DNMT3A-208	ENST00000466601	GPN3	Q9UHW5	284 aa	Predicted RBP	13.73	□□□□□ -0.21
DNMT3A-208	ENST00000466601	ZNF225	Q9UK10	706 aa		13.73	□□□□□ -0.21
DNMT3A-208	ENST00000466601	KCND3	Q9UK17	655 aa		13.73	□□□□□ -0.21
DNMT3A-208	ENST00000466601	FARSA	Q9Y285	508 aa	Known RBP	13.73	□□□□□ -0.21
DNMT3A-208	ENST00000466601	FRY	Q5TBA9	3013 aa		13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601	APC2	O95996	2303 aa		13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601	TMEM120B	A0PK00	339 aa		13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601	LRIT2	A6NDA9	550 aa		13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601	SRRM3	A6NNA2	597 aa	Predicted RBP	13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601		H0YIG0	161 aa		13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601	FFAR3	O14843	346 aa		13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601	GPR42	O15529	346 aa		13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601	EFS	O43281	561 aa		13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601	KLHL18	O94889	574 aa		13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601	NSA2	O95478	260 aa	Known RBP	13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601	TBX6	O95947	436 aa	Predicted RBP	13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601	TGFB1	P01137	390 aa		13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601	DHRS4L1	P0CG22	281 aa		13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601	SMIM10L1	P0DMW3	83 aa		13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601	ALOX12	P18054	663 aa		13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601	FBL	P22087	321 aa	Known RBP	13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601	HNRNPH1	P31943	449 aa	Known RBP	13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601	HPD	P32754	393 aa	Predicted RBP	13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601	PIK3CB	P42338	1070 aa		13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601	CCR10	P46092	362 aa		13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601	SERPINB4	P48594	390 aa		13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601	NEK2	P51955	445 aa		13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601	RAB8A	P61006	207 aa		13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601	PHEX	P78562	749 aa		13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601	NCF4	Q15080	339 aa		13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601	ST3GAL2	Q16842	350 aa		13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601	ADPRM	Q3LIE5	342 aa		13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601	COX15	Q7KZN9	410 aa		13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601	OVCH1	Q7RTY7	1134 aa		13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601	NUDCD3	Q8IVD9	361 aa		13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601	RNF175	Q8N4F7	328 aa		13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601	ANKRD42	Q8N9B4	389 aa		13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601	AGAP11	Q8TF27	550 aa		13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601	GAL3ST3	Q96A11	431 aa		13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601	MTFMT	Q96DP5	389 aa	Known RBP	13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601	MS4A6E	Q96DS6	147 aa		13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601	CMTM7	Q96FZ5	175 aa		13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601	SMIM10	Q96HG1	83 aa		13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601	CNDP1	Q96KN2	507 aa		13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601	ATP6V1G3	Q96LB4	118 aa		13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601	F2RL3	Q96RI0	385 aa		13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601	MTERF1	Q99551	399 aa	Known RBP	13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601	MS4A8	Q9BY19	250 aa		13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601	FAM117A	Q9C073	453 aa		13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601	REXO4	Q9GZR2	422 aa	Known RBP	13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601	MID1IP1	Q9NPA3	183 aa		13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601	ZNF446	Q9NWS9	450 aa		13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601	IL17B	Q9UHF5	180 aa		13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601	SNX6	Q9UNH7	406 aa		13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601	NAALAD2	Q9Y3Q0	740 aa		13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601	PCDHGA6	Q9Y5G7	932 aa		13.72	□□□□□ -0.21
DNMT3A-208	ENST00000466601	SEC16A	O15027	2179 aa		13.71	□□□□□ -0.21
DNMT3A-208	ENST00000466601	WDR91	A4D1P6	747 aa		13.71	□□□□□ -0.21
DNMT3A-208	ENST00000466601	MAGEB17	A8MXT2	336 aa		13.71	□□□□□ -0.21
DNMT3A-208	ENST00000466601		H3BQF6	201 aa		13.71	□□□□□ -0.21
DNMT3A-208	ENST00000466601	SGK494	L7N484	410 aa		13.71	□□□□□ -0.21
DNMT3A-208	ENST00000466601	UBFD1	O14562	309 aa	Known RBP	13.71	□□□□□ -0.21
DNMT3A-208	ENST00000466601	BIRC5	O15392	142 aa		13.71	□□□□□ -0.21
DNMT3A-208	ENST00000466601	ERI3	O43414	337 aa	Known RBP	13.71	□□□□□ -0.21
DNMT3A-208	ENST00000466601	GALR3	O60755	368 aa	Predicted RBP	13.71	□□□□□ -0.21
DNMT3A-208	ENST00000466601	ESRRB	O95718	433 aa		13.71	□□□□□ -0.21
DNMT3A-208	ENST00000466601	B3GALT4	O96024	378 aa		13.71	□□□□□ -0.21
DNMT3A-208	ENST00000466601	ALB	P02768	609 aa		13.71	□□□□□ -0.21
DNMT3A-208	ENST00000466601	CD63	P08962	238 aa		13.71	□□□□□ -0.21
DNMT3A-208	ENST00000466601	WT1	P19544	449 aa	Predicted RBP	13.71	□□□□□ -0.21
DNMT3A-208	ENST00000466601	PTPN4	P29074	926 aa		13.71	□□□□□ -0.21
DNMT3A-208	ENST00000466601	SLC18A1	P54219	525 aa		13.71	□□□□□ -0.21
DNMT3A-208	ENST00000466601	RPS13	P62277	151 aa	Known RBP	13.71	□□□□□ -0.21
DNMT3A-208	ENST00000466601	IFT88	Q13099	833 aa		13.71	□□□□□ -0.21
DNMT3A-208	ENST00000466601	DSG2	Q14126	1118 aa		13.71	□□□□□ -0.21
DNMT3A-208	ENST00000466601	DEFB134	Q4QY38	66 aa		13.71	□□□□□ -0.21
DNMT3A-208	ENST00000466601	TTMP	Q5BVD1	217 aa		13.71	□□□□□ -0.21
DNMT3A-208	ENST00000466601	FRG2	Q64ET8	278 aa		13.71	□□□□□ -0.21
DNMT3A-208	ENST00000466601	NIPAL1	Q6NVV3	410 aa		13.71	□□□□□ -0.21
DNMT3A-208	ENST00000466601	MRPL14	Q6P1L8	145 aa	Known RBP	13.71	□□□□□ -0.21
DNMT3A-208	ENST00000466601	CCDC81	Q6ZN84	652 aa		13.71	□□□□□ -0.21
DNMT3A-208	ENST00000466601	CHSY3	Q70JA7	882 aa		13.71	□□□□□ -0.21
DNMT3A-208	ENST00000466601	PDSS2	Q86YH6	399 aa		13.71	□□□□□ -0.21
DNMT3A-208	ENST00000466601	ENDOV	Q8N8Q3	282 aa	Known RBP	13.71	□□□□□ -0.21
DNMT3A-208	ENST00000466601	CDYL2	Q8N8U2	506 aa		13.71	□□□□□ -0.21

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