RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 TSACCQ96A04 125 aaPredicted RBP17.49■□□□□ 0.39
COL9A3-205ENST00000466192 COQ8BQ96D53 544 aa17.49■□□□□ 0.39
COL9A3-205ENST00000466192 SLC47A1Q96FL8 570 aa17.49■□□□□ 0.39
COL9A3-205ENST00000466192 REXO5Q96IC2 774 aaKnown RBP17.49■□□□□ 0.39
COL9A3-205ENST00000466192 WDR92Q96MX6 357 aa17.49■□□□□ 0.39
COL9A3-205ENST00000466192 SORBS1Q9BX66 1292 aaKnown RBP17.49■□□□□ 0.39
COL9A3-205ENST00000466192 ANKRD60Q9BZ19 345 aa17.49■□□□□ 0.39
COL9A3-205ENST00000466192 MVB12BQ9H7P6 319 aa17.49■□□□□ 0.39
COL9A3-205ENST00000466192 NTN4Q9HB63 628 aa17.49■□□□□ 0.39
COL9A3-205ENST00000466192 SH3BP4Q9P0V3 963 aa17.49■□□□□ 0.39
COL9A3-205ENST00000466192 TBC1D29Q9UFV1 150 aa17.49■□□□□ 0.39
COL9A3-205ENST00000466192 ICKQ9UPZ9 632 aa17.49■□□□□ 0.39
COL9A3-205ENST00000466192 DEAF1O75398 565 aaPredicted RBP17.49■□□□□ 0.39
COL9A3-205ENST00000466192 SERPINA1P01009 418 aa17.49■□□□□ 0.39
COL9A3-205ENST00000466192 KLK1P06870 262 aa17.49■□□□□ 0.39
COL9A3-205ENST00000466192 GNAO1P09471 354 aa17.49■□□□□ 0.39
COL9A3-205ENST00000466192 CXCR2P25025 360 aa17.49■□□□□ 0.39
COL9A3-205ENST00000466192 AK4P27144 223 aaPredicted RBP17.49■□□□□ 0.39
COL9A3-205ENST00000466192 RPS6KA3P51812 740 aa17.49■□□□□ 0.39
COL9A3-205ENST00000466192 CYP4F2P78329 520 aa17.49■□□□□ 0.39
COL9A3-205ENST00000466192 ZNF385BQ569K4 471 aa17.49■□□□□ 0.39
COL9A3-205ENST00000466192 OTUD3Q5T2D3 398 aaPredicted RBP17.49■□□□□ 0.39
COL9A3-205ENST00000466192 OR2L8Q8NGY9 312 aa17.49■□□□□ 0.39
COL9A3-205ENST00000466192 PNPT1Q8TCS8 783 aaKnown RBP17.49■□□□□ 0.39
COL9A3-205ENST00000466192 C16orf78Q8WTQ4 265 aa17.49■□□□□ 0.39
COL9A3-205ENST00000466192 ADI1Q9BV57 179 aa17.49■□□□□ 0.39
COL9A3-205ENST00000466192 ZNF696Q9H7X3 374 aa17.49■□□□□ 0.39
COL9A3-205ENST00000466192 DCAF13Q9NV06 445 aaKnown RBP17.49■□□□□ 0.39
COL9A3-205ENST00000466192 MAPRE3Q9UPY8 281 aa17.49■□□□□ 0.39
COL9A3-205ENST00000466192 IGKV1-8A0A0C4DH67 115 aa17.48■□□□□ 0.39
COL9A3-205ENST00000466192 ANKDD1BA6NHY2 528 aa17.48■□□□□ 0.39
COL9A3-205ENST00000466192 EPN2O95208 641 aa17.48■□□□□ 0.39
COL9A3-205ENST00000466192 SEMA4FO95754 770 aa17.48■□□□□ 0.39
COL9A3-205ENST00000466192 RETP07949 1114 aa17.48■□□□□ 0.39
COL9A3-205ENST00000466192 ATP6V1B1P15313 513 aa17.48■□□□□ 0.39
COL9A3-205ENST00000466192 MC1RQ01726 317 aa17.48■□□□□ 0.39
COL9A3-205ENST00000466192 MERTKQ12866 999 aa17.48■□□□□ 0.39
COL9A3-205ENST00000466192 ZCCHC8Q6NZY4 707 aaKnown RBP17.48■□□□□ 0.39
COL9A3-205ENST00000466192 SLC9B2Q86UD5 537 aa17.48■□□□□ 0.39
COL9A3-205ENST00000466192 CCL4L1Q8NHW4 92 aa17.48■□□□□ 0.39
COL9A3-205ENST00000466192 MSANTD3Q96H12 275 aa17.48■□□□□ 0.39
COL9A3-205ENST00000466192 TRAPPC9Q96Q05 1148 aa17.48■□□□□ 0.39
COL9A3-205ENST00000466192 REEP4Q9H6H4 257 aa17.48■□□□□ 0.39
COL9A3-205ENST00000466192 USP36Q9P275 1121 aaKnown RBP17.48■□□□□ 0.39
COL9A3-205ENST00000466192 ATP6V1HQ9UI12 483 aa17.48■□□□□ 0.39
COL9A3-205ENST00000466192 A0A1B0GTW7 788 aa17.47■□□□□ 0.39
COL9A3-205ENST00000466192 C10orf142B7Z368 130 aa17.47■□□□□ 0.39
COL9A3-205ENST00000466192 UPK1AO00322 258 aa17.47■□□□□ 0.39
COL9A3-205ENST00000466192 APBB3O95704 486 aa17.47■□□□□ 0.39
COL9A3-205ENST00000466192 CLPTM1O96005 669 aa17.47■□□□□ 0.39
COL9A3-205ENST00000466192 SRFP11831 508 aa17.47■□□□□ 0.39
COL9A3-205ENST00000466192 CSNK1G2P78368 415 aa17.47■□□□□ 0.39
COL9A3-205ENST00000466192 PRDX1Q06830 199 aaKnown RBP17.47■□□□□ 0.39
COL9A3-205ENST00000466192 LIN52Q52LA3 116 aa17.47■□□□□ 0.39
COL9A3-205ENST00000466192 LPCAT2Q7L5N7 544 aa17.47■□□□□ 0.39
COL9A3-205ENST00000466192 SERPINA11Q86U17 422 aa17.47■□□□□ 0.39
COL9A3-205ENST00000466192 PGBD3Q8N328 593 aa17.47■□□□□ 0.39
COL9A3-205ENST00000466192 FAM47BQ8NA70 645 aa17.47■□□□□ 0.39
COL9A3-205ENST00000466192 OR52E4Q8NGH9 312 aa17.47■□□□□ 0.39
COL9A3-205ENST00000466192 OR10Q1Q8NGQ4 319 aa17.47■□□□□ 0.39
COL9A3-205ENST00000466192 TMBIM1Q969X1 311 aa17.47■□□□□ 0.39
COL9A3-205ENST00000466192 GAS2L1Q99501 681 aaPredicted RBP17.47■□□□□ 0.39
COL9A3-205ENST00000466192 RAB11FIP5Q9BXF6 653 aa17.47■□□□□ 0.39
COL9A3-205ENST00000466192 MS4A8Q9BY19 250 aa17.47■□□□□ 0.39
COL9A3-205ENST00000466192 FAM192AQ9GZU8 254 aa17.47■□□□□ 0.39
COL9A3-205ENST00000466192 SLC2A4RGQ9NR83 387 aa17.47■□□□□ 0.39
COL9A3-205ENST00000466192 PLPP1O14494 284 aa17.47■□□□□ 0.39
COL9A3-205ENST00000466192 HTR1BP28222 390 aa17.47■□□□□ 0.39
COL9A3-205ENST00000466192 RPS9P46781 194 aaKnown RBP17.47■□□□□ 0.39
COL9A3-205ENST00000466192 TAS2R50P59544 299 aa17.47■□□□□ 0.39
COL9A3-205ENST00000466192 DEPDC1Q5TB30 811 aa17.47■□□□□ 0.39
COL9A3-205ENST00000466192 KHDRBS2Q5VWX1 349 aaKnown RBP17.47■□□□□ 0.39
COL9A3-205ENST00000466192 PLD3Q8IV08 490 aa17.47■□□□□ 0.39
COL9A3-205ENST00000466192 FAM20CQ8IXL6 584 aa17.47■□□□□ 0.39
COL9A3-205ENST00000466192 VPS37AQ8NEZ2 397 aa17.47■□□□□ 0.39
COL9A3-205ENST00000466192 CYGBQ8WWM9 190 aa17.47■□□□□ 0.39
COL9A3-205ENST00000466192 CXorf40BQ96DE9 158 aa17.47■□□□□ 0.39
COL9A3-205ENST00000466192 F2RL3Q96RI0 385 aa17.47■□□□□ 0.39
COL9A3-205ENST00000466192 ZNF717Q9BY31 904 aaPredicted RBP17.47■□□□□ 0.39
COL9A3-205ENST00000466192 MYNNQ9NPC7 610 aa17.47■□□□□ 0.39
COL9A3-205ENST00000466192 C8orf4Q9NR00 106 aa17.47■□□□□ 0.39
COL9A3-205ENST00000466192 AASDHPPTQ9NRN7 309 aa17.47■□□□□ 0.39
COL9A3-205ENST00000466192 ZNF639Q9UID6 485 aa17.47■□□□□ 0.39
COL9A3-205ENST00000466192 BTNL2Q9UIR0 455 aa17.47■□□□□ 0.39
COL9A3-205ENST00000466192 MAGED1Q9Y5V3 778 aaPredicted RBP17.47■□□□□ 0.39
COL9A3-205ENST00000466192 LCMT2O60294 686 aaKnown RBP17.46■□□□□ 0.39
COL9A3-205ENST00000466192 CST1P01037 141 aa17.46■□□□□ 0.39
COL9A3-205ENST00000466192 FURINP09958 794 aa17.46■□□□□ 0.39
COL9A3-205ENST00000466192 TPP2P29144 1249 aaPredicted RBP17.46■□□□□ 0.39
COL9A3-205ENST00000466192 C2orf80Q0P641 193 aa17.46■□□□□ 0.39
COL9A3-205ENST00000466192 FAM71E1Q6IPT2 247 aa17.46■□□□□ 0.39
COL9A3-205ENST00000466192 ABRAXAS1Q6UWZ7 409 aa17.46■□□□□ 0.39
COL9A3-205ENST00000466192 SATL1Q86VE3 508 aa17.46■□□□□ 0.39
COL9A3-205ENST00000466192 CLEC4FQ8N1N0 589 aa17.46■□□□□ 0.39
COL9A3-205ENST00000466192 DPH2Q9BQC3 489 aaPredicted RBP17.46■□□□□ 0.39
COL9A3-205ENST00000466192 TMEM168Q9H0V1 697 aa17.46■□□□□ 0.39
COL9A3-205ENST00000466192 C6orf106Q9H6K1 298 aaPredicted RBP17.46■□□□□ 0.39
COL9A3-205ENST00000466192 NT5DC2Q9H857 520 aa17.46■□□□□ 0.39
COL9A3-205ENST00000466192 CAAP1Q9H8G2 361 aa17.46■□□□□ 0.39
COL9A3-205ENST00000466192 C2orf42Q9NWW7 574 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms