RNA–Protein interactions for RNA: ENST00000465980.1

ATG3-203, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-203ENST00000465980 DLG3Q92796 817 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 EXT2Q93063 718 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 MR1Q95460 341 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 COL26A1Q96A83 441 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 PHF21BQ96EK2 531 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 TMEM237Q96Q45 408 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 CCT8L2Q96SF2 557 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 C1QTNF3Q9BXJ4 246 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 ERVK-6Q9BXR3 956 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 TRIM54Q9BYV2 358 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 C20orf27Q9GZN8 174 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 DRC3Q9H069 523 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 OR52A5Q9H2C5 316 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 ACTL8Q9H568 366 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 PARVBQ9HBI1 364 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 LHX9Q9NQ69 397 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 FGFR1OP2Q9NVK5 253 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 CD274Q9NZQ7 290 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 SEMA5BQ9P283 1151 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 STOML1Q9UBI4 398 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 KCND3Q9UK17 655 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 POMT2Q9UKY4 750 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 PDE10AQ9Y233 779 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 TP53TG5Q9Y2B4 290 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 HEBP2Q9Y5Z4 205 aa9.03□□□□□ -0.96
ATG3-203ENST00000465980 NUP210LQ5VU65 1888 aa9.02□□□□□ -0.96
ATG3-203ENST00000465980 ICE1Q9Y2F5 2266 aa9.02□□□□□ -0.96
ATG3-203ENST00000465980 SHANK1Q9Y566 2161 aa9.02□□□□□ -0.97
ATG3-203ENST00000465980 NCF1BA6NI72 391 aaPredicted RBP9.02□□□□□ -0.97
ATG3-203ENST00000465980 NCF1CA8MVU1 366 aaPredicted RBP9.02□□□□□ -0.97
ATG3-203ENST00000465980 TMEM150CB9EJG8 249 aa9.02□□□□□ -0.97
ATG3-203ENST00000465980 BTN3A3O00478 584 aa9.02□□□□□ -0.97
ATG3-203ENST00000465980 ITM2AO43736 263 aa9.02□□□□□ -0.97
ATG3-203ENST00000465980 CPNE3O75131 537 aaKnown RBP9.02□□□□□ -0.97
ATG3-203ENST00000465980 CREG1O75629 220 aa9.02□□□□□ -0.97
ATG3-203ENST00000465980 SNUPNO95149 360 aaKnown RBP9.02□□□□□ -0.97
ATG3-203ENST00000465980 CATP04040 527 aaKnown RBP9.02□□□□□ -0.97
ATG3-203ENST00000465980 ANXA5P08758 320 aa9.02□□□□□ -0.97
ATG3-203ENST00000465980 HIST1H2AGP0C0S8 130 aaPredicted RBP9.02□□□□□ -0.97
ATG3-203ENST00000465980 NCF1P14598 390 aaPredicted RBP9.02□□□□□ -0.97
ATG3-203ENST00000465980 PVRP15151 417 aa9.02□□□□□ -0.97
ATG3-203ENST00000465980 ST6GAL1P15907 406 aa9.02□□□□□ -0.97
ATG3-203ENST00000465980 HIST1H2ADP20671 130 aa9.02□□□□□ -0.97
ATG3-203ENST00000465980 ACADLP28330 430 aa9.02□□□□□ -0.97
ATG3-203ENST00000465980 ARRB2P32121 409 aa9.02□□□□□ -0.97
ATG3-203ENST00000465980 AP1S2P56377 157 aa9.02□□□□□ -0.97
ATG3-203ENST00000465980 ABRQ12979 859 aa9.02□□□□□ -0.97
ATG3-203ENST00000465980 CHAF1BQ13112 559 aa9.02□□□□□ -0.97
ATG3-203ENST00000465980 RCN2Q14257 317 aa9.02□□□□□ -0.97
ATG3-203ENST00000465980 PFKFB4Q16877 469 aa9.02□□□□□ -0.97
ATG3-203ENST00000465980 LACTB2Q53H82 288 aaPredicted RBP9.02□□□□□ -0.97
ATG3-203ENST00000465980 UNC50Q53HI1 259 aa9.02□□□□□ -0.97
ATG3-203ENST00000465980 TMTC4Q5T4D3 741 aa9.02□□□□□ -0.97
ATG3-203ENST00000465980 SULT1C3Q6IMI6 304 aa9.02□□□□□ -0.97
ATG3-203ENST00000465980 UNC5DQ6UXZ4 953 aa9.02□□□□□ -0.97
ATG3-203ENST00000465980 PIGWQ7Z7B1 504 aa9.02□□□□□ -0.97
ATG3-203ENST00000465980 CCNYL1Q8N7R7 359 aa9.02□□□□□ -0.97
ATG3-203ENST00000465980 OR52E1Q8NGJ3 308 aa9.02□□□□□ -0.97
ATG3-203ENST00000465980 OR5AR1Q8NGP9 310 aa9.02□□□□□ -0.97
ATG3-203ENST00000465980 MCOLN3Q8TDD5 553 aa9.02□□□□□ -0.97
ATG3-203ENST00000465980 SKA2Q8WVK7 121 aaPredicted RBP9.02□□□□□ -0.97
ATG3-203ENST00000465980 ZFPM2Q8WW38 1151 aa9.02□□□□□ -0.97
ATG3-203ENST00000465980 TFGQ92734 400 aaPredicted RBP9.02□□□□□ -0.97
ATG3-203ENST00000465980 ZNF501Q96CX3 271 aaPredicted RBP9.02□□□□□ -0.97
ATG3-203ENST00000465980 HIST1H2AHQ96KK5 128 aa9.02□□□□□ -0.97
ATG3-203ENST00000465980 CNDP1Q96KN2 507 aa9.02□□□□□ -0.97
ATG3-203ENST00000465980 FOPNLQ96NB1 174 aa9.02□□□□□ -0.97
ATG3-203ENST00000465980 HIST1H2AJQ99878 128 aa9.02□□□□□ -0.97
ATG3-203ENST00000465980 H2AFJQ9BTM1 129 aa9.02□□□□□ -0.97
ATG3-203ENST00000465980 TRMOQ9BU70 441 aa9.02□□□□□ -0.97
ATG3-203ENST00000465980 KRTAP9-9Q9BYP9 154 aa9.02□□□□□ -0.97
ATG3-203ENST00000465980 KRTAP9-4Q9BYQ2 154 aa9.02□□□□□ -0.97
ATG3-203ENST00000465980 GSTO2Q9H4Y5 243 aa9.02□□□□□ -0.97
ATG3-203ENST00000465980 RABEP2Q9H5N1 569 aa9.02□□□□□ -0.97
ATG3-203ENST00000465980 UTP6Q9NYH9 597 aaKnown RBP9.02□□□□□ -0.97
ATG3-203ENST00000465980 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.02□□□□□ -0.97
ATG3-203ENST00000465980 TUBD1Q9UJT1 453 aa9.02□□□□□ -0.97
ATG3-203ENST00000465980 PTBP2Q9UKA9 531 aaKnown RBP9.02□□□□□ -0.97
ATG3-203ENST00000465980 PLAGL1Q9UM63 463 aa9.02□□□□□ -0.97
ATG3-203ENST00000465980 POLHQ9Y253 713 aa9.02□□□□□ -0.97
ATG3-203ENST00000465980 MAN2B2Q9Y2E5 1009 aa9.02□□□□□ -0.97
ATG3-203ENST00000465980 TNPO3Q9Y5L0 923 aaKnown RBP9.02□□□□□ -0.97
ATG3-203ENST00000465980 PABPN1LA6NDY0 278 aaKnown RBP9.01□□□□□ -0.97
ATG3-203ENST00000465980 ARHGEF33A8MVX0 844 aa9.01□□□□□ -0.97
ATG3-203ENST00000465980 C21orf140B9A014 251 aa9.01□□□□□ -0.97
ATG3-203ENST00000465980 MKRN2OSH3BPM6 223 aa9.01□□□□□ -0.97
ATG3-203ENST00000465980 K7EM74 188 aa9.01□□□□□ -0.97
ATG3-203ENST00000465980 NDUFAB1O14561 156 aa9.01□□□□□ -0.97
ATG3-203ENST00000465980 TAPBPO15533 448 aa9.01□□□□□ -0.97
ATG3-203ENST00000465980 LYPLA1O75608 230 aaPredicted RBP9.01□□□□□ -0.97
ATG3-203ENST00000465980 DNAJB5O75953 348 aa9.01□□□□□ -0.97
ATG3-203ENST00000465980 SUPT7LO94864 414 aa9.01□□□□□ -0.97
ATG3-203ENST00000465980 SIX3O95343 332 aaPredicted RBP9.01□□□□□ -0.97
ATG3-203ENST00000465980 TGDSO95455 350 aa9.01□□□□□ -0.97
ATG3-203ENST00000465980 HSPA4LO95757 839 aa9.01□□□□□ -0.97
ATG3-203ENST00000465980 RPS17P08708 135 aaKnown RBP9.01□□□□□ -0.97
ATG3-203ENST00000465980 TROVE2P10155 538 aaKnown RBP eCLIP9.01□□□□□ -0.97
ATG3-203ENST00000465980 EEF1DP29692 281 aaKnown RBP9.01□□□□□ -0.97
ATG3-203ENST00000465980 PRDX3P30048 256 aaKnown RBP9.01□□□□□ -0.97
ATG3-203ENST00000465980 GGT5P36269 586 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms