RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 PAGE2BQ5JRK9 111 aa11.05□□□□□ -0.64
CUX1-207ENST00000465461 CPZQ66K79 652 aa11.05□□□□□ -0.64
CUX1-207ENST00000465461 HIST2H2AA3Q6FI13 130 aa11.05□□□□□ -0.64
CUX1-207ENST00000465461 FAAH2Q6GMR7 532 aa11.05□□□□□ -0.64
CUX1-207ENST00000465461 GRHL2Q6ISB3 625 aa11.05□□□□□ -0.64
CUX1-207ENST00000465461 MED27Q6P2C8 311 aa11.05□□□□□ -0.64
CUX1-207ENST00000465461 AFAP1L2Q8N4X5 818 aa11.05□□□□□ -0.64
CUX1-207ENST00000465461 CCDC63Q8NA47 563 aa11.05□□□□□ -0.64
CUX1-207ENST00000465461 TRPV3Q8NET8 790 aa11.05□□□□□ -0.64
CUX1-207ENST00000465461 OR2Y1Q8NGV0 311 aa11.05□□□□□ -0.64
CUX1-207ENST00000465461 OR51Q1Q8NH59 317 aa11.05□□□□□ -0.64
CUX1-207ENST00000465461 ADAMTS17Q8TE56 1095 aa11.05□□□□□ -0.64
CUX1-207ENST00000465461 TRPC4APQ8TEL6 797 aa11.05□□□□□ -0.64
CUX1-207ENST00000465461 ZNF483Q8TF39 744 aaPredicted RBP11.05□□□□□ -0.64
CUX1-207ENST00000465461 ATP6V1E2Q96A05 226 aa11.05□□□□□ -0.64
CUX1-207ENST00000465461 FKBP10Q96AY3 582 aa11.05□□□□□ -0.64
CUX1-207ENST00000465461 MIEF2Q96C03 454 aa11.05□□□□□ -0.64
CUX1-207ENST00000465461 TMEM237Q96Q45 408 aa11.05□□□□□ -0.64
CUX1-207ENST00000465461 F2RL3Q96RI0 385 aa11.05□□□□□ -0.64
CUX1-207ENST00000465461 C17orf62Q9BQA9 187 aa11.05□□□□□ -0.64
CUX1-207ENST00000465461 EFCAB11Q9BUY7 163 aa11.05□□□□□ -0.64
CUX1-207ENST00000465461 ROPN1BQ9BZX4 212 aaPredicted RBP11.05□□□□□ -0.64
CUX1-207ENST00000465461 NT5DC2Q9H857 520 aa11.05□□□□□ -0.64
CUX1-207ENST00000465461 ROPN1Q9HAT0 212 aaPredicted RBP11.05□□□□□ -0.64
CUX1-207ENST00000465461 COPG2Q9UBF2 871 aa11.05□□□□□ -0.64
CUX1-207ENST00000465461 ZNF282Q9UDV7 671 aaPredicted RBP11.05□□□□□ -0.64
CUX1-207ENST00000465461 LGALS13Q9UHV8 139 aa11.05□□□□□ -0.64
CUX1-207ENST00000465461 PADI2Q9Y2J8 665 aa11.05□□□□□ -0.64
CUX1-207ENST00000465461 LRIT2A6NDA9 550 aa11.04□□□□□ -0.64
CUX1-207ENST00000465461 PLIN3O60664 434 aa11.04□□□□□ -0.64
CUX1-207ENST00000465461 GALR3O60755 368 aaPredicted RBP11.04□□□□□ -0.64
CUX1-207ENST00000465461 CDC123O75794 336 aaPredicted RBP11.04□□□□□ -0.64
CUX1-207ENST00000465461 SUPT7LO94864 414 aa11.04□□□□□ -0.64
CUX1-207ENST00000465461 NSA2O95478 260 aaKnown RBP11.04□□□□□ -0.64
CUX1-207ENST00000465461 ALBP02768 609 aa11.04□□□□□ -0.64
CUX1-207ENST00000465461 TUBBP07437 444 aa11.04□□□□□ -0.64
CUX1-207ENST00000465461 SERPINA6P08185 405 aa11.04□□□□□ -0.64
CUX1-207ENST00000465461 FAM87AP0C7U9 286 aa11.04□□□□□ -0.64
CUX1-207ENST00000465461 SMIM10L1P0DMW3 83 aa11.04□□□□□ -0.64
CUX1-207ENST00000465461 ALOX12P18054 663 aa11.04□□□□□ -0.64
CUX1-207ENST00000465461 ATP5F1P24539 256 aaPredicted RBP11.04□□□□□ -0.64
CUX1-207ENST00000465461 CRHR1P34998 444 aa11.04□□□□□ -0.64
CUX1-207ENST00000465461 CCR10P46092 362 aa11.04□□□□□ -0.64
CUX1-207ENST00000465461 CCT5P48643 541 aa11.04□□□□□ -0.64
CUX1-207ENST00000465461 CCNG1P51959 295 aa11.04□□□□□ -0.64
CUX1-207ENST00000465461 PLA2G16P53816 162 aa11.04□□□□□ -0.64
CUX1-207ENST00000465461 LAPTM5Q13571 262 aa11.04□□□□□ -0.64
CUX1-207ENST00000465461 ATP1A4Q13733 1029 aa11.04□□□□□ -0.64
CUX1-207ENST00000465461 E2F2Q14209 437 aa11.04□□□□□ -0.64
CUX1-207ENST00000465461 SSPNQ14714 243 aa11.04□□□□□ -0.64
CUX1-207ENST00000465461 RBBP7Q16576 425 aa11.04□□□□□ -0.64
CUX1-207ENST00000465461 ZNF678Q5SXM1 525 aa11.04□□□□□ -0.64
CUX1-207ENST00000465461 CEP85LQ5SZL2 805 aa11.04□□□□□ -0.64
CUX1-207ENST00000465461 BORAQ6PGQ7 559 aa11.04□□□□□ -0.64
CUX1-207ENST00000465461 PPP1R32Q7Z5V6 425 aa11.04□□□□□ -0.64
CUX1-207ENST00000465461 LCA5Q86VQ0 697 aa11.04□□□□□ -0.64
CUX1-207ENST00000465461 ZC3H7AQ8IWR0 971 aaKnown RBP11.04□□□□□ -0.64
CUX1-207ENST00000465461 IQCKQ8N0W5 287 aa11.04□□□□□ -0.64
CUX1-207ENST00000465461 RIBC1Q8N443 379 aaPredicted RBP11.04□□□□□ -0.64
CUX1-207ENST00000465461 EXD3Q8N9H8 876 aa11.04□□□□□ -0.64
CUX1-207ENST00000465461 BANPQ8N9N5 519 aa11.04□□□□□ -0.64
CUX1-207ENST00000465461 OR7G3Q8NG95 312 aa11.04□□□□□ -0.64
CUX1-207ENST00000465461 OR4F6Q8NGB9 312 aa11.04□□□□□ -0.64
CUX1-207ENST00000465461 PPP4R1Q8TF05 950 aa11.04□□□□□ -0.64
CUX1-207ENST00000465461 ZNF473Q8WTR7 871 aaKnown RBP11.04□□□□□ -0.64
CUX1-207ENST00000465461 MS4A6EQ96DS6 147 aa11.04□□□□□ -0.64
CUX1-207ENST00000465461 MVB12AQ96EY5 273 aa11.04□□□□□ -0.64
CUX1-207ENST00000465461 PEX11GQ96HA9 241 aa11.04□□□□□ -0.64
CUX1-207ENST00000465461 SMIM10Q96HG1 83 aa11.04□□□□□ -0.64
CUX1-207ENST00000465461 TRIM55Q9BYV6 548 aa11.04□□□□□ -0.64
CUX1-207ENST00000465461 SLC26A1Q9H2B4 701 aa11.04□□□□□ -0.64
CUX1-207ENST00000465461 RHBGQ9H310 441 aa11.04□□□□□ -0.64
CUX1-207ENST00000465461 OR51B5Q9H339 312 aa11.04□□□□□ -0.64
CUX1-207ENST00000465461 CENPHQ9H3R5 247 aa11.04□□□□□ -0.64
CUX1-207ENST00000465461 SLC17A7Q9P2U7 560 aa11.04□□□□□ -0.64
CUX1-207ENST00000465461 GRID1Q9ULK0 1009 aa11.04□□□□□ -0.64
CUX1-207ENST00000465461 TMCO1Q9UM00 188 aa11.04□□□□□ -0.64
CUX1-207ENST00000465461 POLHQ9Y253 713 aa11.04□□□□□ -0.64
CUX1-207ENST00000465461 MAN2B2Q9Y2E5 1009 aa11.04□□□□□ -0.64
CUX1-207ENST00000465461 KCNMB2Q9Y691 235 aa11.04□□□□□ -0.64
CUX1-207ENST00000465461 SLC22A7Q9Y694 548 aa11.04□□□□□ -0.64
CUX1-207ENST00000465461 SCN2AQ99250 2005 aa11.03□□□□□ -0.64
CUX1-207ENST00000465461 IGLV3-12A0A075B6K2 115 aa11.03□□□□□ -0.64
CUX1-207ENST00000465461 FAM227AF5H4B4 570 aa11.03□□□□□ -0.64
CUX1-207ENST00000465461 H0YIG0 161 aa11.03□□□□□ -0.64
CUX1-207ENST00000465461 RTCAO00442 366 aaKnown RBP11.03□□□□□ -0.64
CUX1-207ENST00000465461 ERI3O43414 337 aaKnown RBP11.03□□□□□ -0.64
CUX1-207ENST00000465461 CHST10O43529 356 aa11.03□□□□□ -0.64
CUX1-207ENST00000465461 CLEC3AO75596 197 aa11.03□□□□□ -0.64
CUX1-207ENST00000465461 CLDN9O95484 217 aa11.03□□□□□ -0.64
CUX1-207ENST00000465461 MYL2P10916 166 aa11.03□□□□□ -0.64
CUX1-207ENST00000465461 IMPDH1P20839 514 aa11.03□□□□□ -0.64
CUX1-207ENST00000465461 XCR1P46094 333 aa11.03□□□□□ -0.64
CUX1-207ENST00000465461 PRKAA2P54646 552 aa11.03□□□□□ -0.64
CUX1-207ENST00000465461 HERVK_113P63132 956 aa11.03□□□□□ -0.64
CUX1-207ENST00000465461 RHDQ02161 417 aa11.03□□□□□ -0.64
CUX1-207ENST00000465461 CLCQ05315 142 aa11.03□□□□□ -0.64
CUX1-207ENST00000465461 PCDH1Q08174 1060 aa11.03□□□□□ -0.64
CUX1-207ENST00000465461 TRAF3Q13114 568 aa11.03□□□□□ -0.64
CUX1-207ENST00000465461 HERC3Q15034 1050 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms