RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 SLC22A9Q8IVM8 553 aa11.28□□□□□ -0.6
APTX-213ENST00000465003 AMER2Q8N7J2 671 aa11.28□□□□□ -0.6
APTX-213ENST00000465003 ENDOVQ8N8Q3 282 aaKnown RBP11.28□□□□□ -0.6
APTX-213ENST00000465003 KDF1Q8NAX2 398 aaPredicted RBP11.28□□□□□ -0.6
APTX-213ENST00000465003 CAMKVQ8NCB2 501 aa11.28□□□□□ -0.6
APTX-213ENST00000465003 COL26A1Q96A83 441 aa11.28□□□□□ -0.6
APTX-213ENST00000465003 L3HYPDHQ96EM0 354 aa11.28□□□□□ -0.6
APTX-213ENST00000465003 WDR34Q96EX3 536 aa11.28□□□□□ -0.6
APTX-213ENST00000465003 F2RL3Q96RI0 385 aa11.28□□□□□ -0.6
APTX-213ENST00000465003 EFCAB11Q9BUY7 163 aa11.28□□□□□ -0.6
APTX-213ENST00000465003 GATA5Q9BWX5 397 aaPredicted RBP11.28□□□□□ -0.6
APTX-213ENST00000465003 CAPS2Q9BXY5 557 aa11.28□□□□□ -0.6
APTX-213ENST00000465003 OR51B5Q9H339 312 aa11.28□□□□□ -0.6
APTX-213ENST00000465003 EHD1Q9H4M9 534 aa11.28□□□□□ -0.6
APTX-213ENST00000465003 SOX17Q9H6I2 414 aaPredicted RBP11.28□□□□□ -0.6
APTX-213ENST00000465003 ZNF395Q9H8N7 513 aaPredicted RBP11.28□□□□□ -0.6
APTX-213ENST00000465003 SENP1Q9P0U3 644 aa11.28□□□□□ -0.6
APTX-213ENST00000465003 IFT80Q9P2H3 777 aaPredicted RBP11.28□□□□□ -0.6
APTX-213ENST00000465003 SRPK3Q9UPE1 567 aa11.28□□□□□ -0.6
APTX-213ENST00000465003 NAALAD2Q9Y3Q0 740 aa11.28□□□□□ -0.6
APTX-213ENST00000465003 SMG1Q96Q15 3661 aaKnown RBP11.28□□□□□ -0.6
APTX-213ENST00000465003 MAGEB17A8MXT2 336 aa11.28□□□□□ -0.6
APTX-213ENST00000465003 DSCR3O14972 297 aa11.28□□□□□ -0.6
APTX-213ENST00000465003 RRP8O43159 456 aaKnown RBP11.28□□□□□ -0.6
APTX-213ENST00000465003 ERI3O43414 337 aaKnown RBP11.28□□□□□ -0.6
APTX-213ENST00000465003 CDC123O75794 336 aaPredicted RBP11.28□□□□□ -0.6
APTX-213ENST00000465003 CAPN1P07384 714 aa11.28□□□□□ -0.6
APTX-213ENST00000465003 CD82P27701 267 aa11.28□□□□□ -0.6
APTX-213ENST00000465003 HTR6P50406 440 aa11.28□□□□□ -0.6
APTX-213ENST00000465003 DCDP81605 110 aaKnown RBP11.28□□□□□ -0.6
APTX-213ENST00000465003 VWA2Q5GFL6 755 aa11.28□□□□□ -0.6
APTX-213ENST00000465003 CFAP157Q5JU67 520 aa11.28□□□□□ -0.6
APTX-213ENST00000465003 ZNF517Q6ZMY9 492 aaPredicted RBP11.28□□□□□ -0.6
APTX-213ENST00000465003 AMER3Q8N944 861 aa11.28□□□□□ -0.6
APTX-213ENST00000465003 TLCD1Q96CP7 247 aa11.28□□□□□ -0.6
APTX-213ENST00000465003 C17orf62Q9BQA9 187 aa11.28□□□□□ -0.6
APTX-213ENST00000465003 SARGQ9BW04 601 aa11.28□□□□□ -0.6
APTX-213ENST00000465003 C1QTNF3Q9BXJ4 246 aa11.28□□□□□ -0.6
APTX-213ENST00000465003 ACTL8Q9H568 366 aa11.28□□□□□ -0.6
APTX-213ENST00000465003 MID1IP1Q9NPA3 183 aa11.28□□□□□ -0.6
APTX-213ENST00000465003 TMCO1Q9UM00 188 aa11.28□□□□□ -0.6
APTX-213ENST00000465003 TMEM233B4DJY2 109 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 MASP2O00187 686 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 NKX2-8O15522 239 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 CXCR2P25025 360 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 SERPINB3P29508 390 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 AHRP35869 848 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 ARSFP54793 590 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 RPS13P62277 151 aaKnown RBP11.27□□□□□ -0.61
APTX-213ENST00000465003 RELAQ04206 551 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 DNASE1L3Q13609 305 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 IL10RAQ13651 578 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 ERV3-1Q14264 604 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 TBCCQ15814 346 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 FAM214AQ32MH5 1076 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 PAGE2BQ5JRK9 111 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 TTC19Q6DKK2 380 aaPredicted RBP11.27□□□□□ -0.61
APTX-213ENST00000465003 CLEC6AQ6EIG7 209 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 FRMD7Q6ZUT3 714 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 TBC1D19Q8N5T2 526 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 UTP15Q8TED0 518 aaKnown RBP11.27□□□□□ -0.61
APTX-213ENST00000465003 ZNF473Q8WTR7 871 aaKnown RBP11.27□□□□□ -0.61
APTX-213ENST00000465003 MYCBPQ99417 103 aaPredicted RBP11.27□□□□□ -0.61
APTX-213ENST00000465003 NLNQ9BYT8 704 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 SLC6A16Q9GZN6 736 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 PTGDR2Q9Y5Y4 395 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 PTPRQQ9UMZ3 2332 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 EPG5Q9HCE0 2579 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 ARHGAP10A1A4S6 786 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 LRIT2A6NDA9 550 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 TERTO14746 1132 aaKnown RBP11.27□□□□□ -0.61
APTX-213ENST00000465003 TRIM13O60858 407 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 LYPLA1O75608 230 aaPredicted RBP11.27□□□□□ -0.61
APTX-213ENST00000465003 KLHL18O94889 574 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 OTCP00480 354 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 GBAP04062 536 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 FURINP09958 794 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 CASP2P42575 452 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 SERPINB4P48594 390 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 EFNA3P52797 238 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 CXADRP78310 365 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 RGS1Q08116 209 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 LCP2Q13094 533 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 E2F2Q14209 437 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 NCF4Q15080 339 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 HIST2H2ACQ16777 129 aaPredicted RBP11.27□□□□□ -0.61
APTX-213ENST00000465003 LIPJQ5W064 366 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 HIST2H2AA3Q6FI13 130 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 LRRC69Q6ZNQ3 347 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 RIPOR1Q6ZS17 1223 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 GPRIN3Q6ZVF9 776 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 LAPTM4BQ86VI4 370 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 LAS2Q8IYD9 372 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 L3MBTL4Q8NA19 623 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 TRPV3Q8NET8 790 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 WDR20Q8TBZ3 569 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 RDH11Q8TC12 318 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 AGAP11Q8TF27 550 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 STARD8Q92502 1023 aa11.27□□□□□ -0.61
APTX-213ENST00000465003 MS4A6EQ96DS6 147 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms