RNA–Protein interactions for RNA: ENST00000464263.1

RAB11FIP3-208, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 329 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-208ENST00000464263 NTMT1Q9BV86 223 aa14.6□□□□□ -0.07
RAB11FIP3-208ENST00000464263 TGIF2Q9GZN2 237 aa14.6□□□□□ -0.07
RAB11FIP3-208ENST00000464263 SOX17Q9H6I2 414 aaPredicted RBP14.6□□□□□ -0.07
RAB11FIP3-208ENST00000464263 NOL11Q9H8H0 719 aaKnown RBP14.6□□□□□ -0.07
RAB11FIP3-208ENST00000464263 MKKSQ9NPJ1 570 aaPredicted RBP14.6□□□□□ -0.07
RAB11FIP3-208ENST00000464263 TRPC4Q9UBN4 977 aa14.6□□□□□ -0.07
RAB11FIP3-208ENST00000464263 NXT1Q9UKK6 140 aaKnown RBP14.6□□□□□ -0.07
RAB11FIP3-208ENST00000464263 POLHQ9Y253 713 aa14.6□□□□□ -0.07
RAB11FIP3-208ENST00000464263 NAALAD2Q9Y3Q0 740 aa14.6□□□□□ -0.07
RAB11FIP3-208ENST00000464263 MAP4K5Q9Y4K4 846 aa14.6□□□□□ -0.07
RAB11FIP3-208ENST00000464263 CCDC151A5D8V7 595 aa14.59□□□□□ -0.07
RAB11FIP3-208ENST00000464263 URADA6NGE7 173 aa14.59□□□□□ -0.07
RAB11FIP3-208ENST00000464263 C4orf51C9J302 202 aa14.59□□□□□ -0.07
RAB11FIP3-208ENST00000464263 G3V2L1 256 aa14.59□□□□□ -0.07
RAB11FIP3-208ENST00000464263 ERVH48-1M5A8F1 160 aa14.59□□□□□ -0.07
RAB11FIP3-208ENST00000464263 COPEO14579 308 aa14.59□□□□□ -0.07
RAB11FIP3-208ENST00000464263 FFAR3O14843 346 aa14.59□□□□□ -0.07
RAB11FIP3-208ENST00000464263 GPR42O15529 346 aa14.59□□□□□ -0.07
RAB11FIP3-208ENST00000464263 PLIN3O60664 434 aa14.59□□□□□ -0.07
RAB11FIP3-208ENST00000464263 UGDHO60701 494 aa14.59□□□□□ -0.07
RAB11FIP3-208ENST00000464263 GALR3O60755 368 aaPredicted RBP14.59□□□□□ -0.07
RAB11FIP3-208ENST00000464263 DNAJB6O75190 326 aa14.59□□□□□ -0.07
RAB11FIP3-208ENST00000464263 KLHL18O94889 574 aa14.59□□□□□ -0.07
RAB11FIP3-208ENST00000464263 IMPDH1P20839 514 aa14.59□□□□□ -0.07
RAB11FIP3-208ENST00000464263 HNRNPH1P31943 449 aaKnown RBP14.59□□□□□ -0.07
RAB11FIP3-208ENST00000464263 PRKAA2P54646 552 aa14.59□□□□□ -0.07
RAB11FIP3-208ENST00000464263 STXBP1P61764 594 aaKnown RBP14.59□□□□□ -0.07
RAB11FIP3-208ENST00000464263 HERVK_113P63132 956 aa14.59□□□□□ -0.07
RAB11FIP3-208ENST00000464263 OCA2Q04671 838 aa14.59□□□□□ -0.07
RAB11FIP3-208ENST00000464263 ADPRMQ3LIE5 342 aa14.59□□□□□ -0.07
RAB11FIP3-208ENST00000464263 CCDC153Q494R4 210 aa14.59□□□□□ -0.07
RAB11FIP3-208ENST00000464263 UNC50Q53HI1 259 aa14.59□□□□□ -0.07
RAB11FIP3-208ENST00000464263 TOR1AIP1Q5JTV8 583 aa14.59□□□□□ -0.07
RAB11FIP3-208ENST00000464263 ZNF678Q5SXM1 525 aa14.59□□□□□ -0.07
RAB11FIP3-208ENST00000464263 BORAQ6PGQ7 559 aa14.59□□□□□ -0.07
RAB11FIP3-208ENST00000464263 SHISA6Q6ZSJ9 500 aa14.59□□□□□ -0.07
RAB11FIP3-208ENST00000464263 RPS27LQ71UM5 84 aaKnown RBP14.59□□□□□ -0.07
RAB11FIP3-208ENST00000464263 ABHD13Q7L211 337 aa14.59□□□□□ -0.07
RAB11FIP3-208ENST00000464263 BANPQ8N9N5 519 aa14.59□□□□□ -0.07
RAB11FIP3-208ENST00000464263 OR52B6Q8NGF0 335 aa14.59□□□□□ -0.07
RAB11FIP3-208ENST00000464263 ZNF473Q8WTR7 871 aaKnown RBP14.59□□□□□ -0.07
RAB11FIP3-208ENST00000464263 UBE2E3Q969T4 207 aa14.59□□□□□ -0.07
RAB11FIP3-208ENST00000464263 MIEF2Q96C03 454 aa14.59□□□□□ -0.07
RAB11FIP3-208ENST00000464263 MS4A6EQ96DS6 147 aa14.59□□□□□ -0.07
RAB11FIP3-208ENST00000464263 WBP1Q96G27 269 aa14.59□□□□□ -0.07
RAB11FIP3-208ENST00000464263 YIPF2Q9BWQ6 316 aa14.59□□□□□ -0.07
RAB11FIP3-208ENST00000464263 ERVK-6Q9BXR3 956 aa14.59□□□□□ -0.07
RAB11FIP3-208ENST00000464263 C12orf65Q9H3J6 166 aaKnown RBP14.59□□□□□ -0.07
RAB11FIP3-208ENST00000464263 RNF11Q9Y3C5 154 aa14.59□□□□□ -0.07
RAB11FIP3-208ENST00000464263 TSC22D4Q9Y3Q8 395 aa14.59□□□□□ -0.07
RAB11FIP3-208ENST00000464263 KCNMB2Q9Y691 235 aa14.59□□□□□ -0.07
RAB11FIP3-208ENST00000464263 H0YIV9 168 aa14.58□□□□□ -0.08
RAB11FIP3-208ENST00000464263 PPP6CO00743 305 aa14.58□□□□□ -0.08
RAB11FIP3-208ENST00000464263 RDH16O75452 317 aa14.58□□□□□ -0.08
RAB11FIP3-208ENST00000464263 BMP10O95393 424 aa14.58□□□□□ -0.08
RAB11FIP3-208ENST00000464263 CLDN9O95484 217 aa14.58□□□□□ -0.08
RAB11FIP3-208ENST00000464263 OTX2P32243 289 aa14.58□□□□□ -0.08
RAB11FIP3-208ENST00000464263 CDH13P55290 713 aa14.58□□□□□ -0.08
RAB11FIP3-208ENST00000464263 RAB8AP61006 207 aa14.58□□□□□ -0.08
RAB11FIP3-208ENST00000464263 KLC1Q07866 573 aa14.58□□□□□ -0.08
RAB11FIP3-208ENST00000464263 TRAF3Q13114 568 aa14.58□□□□□ -0.08
RAB11FIP3-208ENST00000464263 DEFB134Q4QY38 66 aa14.58□□□□□ -0.08
RAB11FIP3-208ENST00000464263 BEND6Q5SZJ8 279 aaPredicted RBP14.58□□□□□ -0.08
RAB11FIP3-208ENST00000464263 NIPAL1Q6NVV3 410 aa14.58□□□□□ -0.08
RAB11FIP3-208ENST00000464263 ZYG11AQ6WRX3 759 aa14.58□□□□□ -0.08
RAB11FIP3-208ENST00000464263 PPP1R32Q7Z5V6 425 aa14.58□□□□□ -0.08
RAB11FIP3-208ENST00000464263 SLC22A9Q8IVM8 553 aa14.58□□□□□ -0.08
RAB11FIP3-208ENST00000464263 OR51Q1Q8NH59 317 aa14.58□□□□□ -0.08
RAB11FIP3-208ENST00000464263 CCT6BQ92526 530 aa14.58□□□□□ -0.08
RAB11FIP3-208ENST00000464263 NACC2Q96BF6 587 aa14.58□□□□□ -0.08
RAB11FIP3-208ENST00000464263 L3HYPDHQ96EM0 354 aa14.58□□□□□ -0.08
RAB11FIP3-208ENST00000464263 ZIM3Q96PE6 472 aa14.58□□□□□ -0.08
RAB11FIP3-208ENST00000464263 CDK15Q96Q40 435 aa14.58□□□□□ -0.08
RAB11FIP3-208ENST00000464263 TMEM237Q96Q45 408 aa14.58□□□□□ -0.08
RAB11FIP3-208ENST00000464263 UBL7Q96S82 380 aaPredicted RBP14.58□□□□□ -0.08
RAB11FIP3-208ENST00000464263 ACTR8Q9H981 624 aa14.58□□□□□ -0.08
RAB11FIP3-208ENST00000464263 SEMA4BQ9NPR2 832 aaPredicted RBP14.58□□□□□ -0.08
RAB11FIP3-208ENST00000464263 ACSS2Q9NR19 701 aa14.58□□□□□ -0.08
RAB11FIP3-208ENST00000464263 MKS1Q9NXB0 559 aa14.58□□□□□ -0.08
RAB11FIP3-208ENST00000464263 RALYQ9UKM9 306 aaKnown RBP14.58□□□□□ -0.08
RAB11FIP3-208ENST00000464263 PCDHGA11Q9Y5H2 935 aa14.58□□□□□ -0.08
RAB11FIP3-208ENST00000464263 A0A1B0GTL3 188 aa14.57□□□□□ -0.08
RAB11FIP3-208ENST00000464263 CREB1P16220 341 aa14.57□□□□□ -0.08
RAB11FIP3-208ENST00000464263 MMP11P24347 488 aa14.57□□□□□ -0.08
RAB11FIP3-208ENST00000464263 SERPINB1P30740 379 aa14.57□□□□□ -0.08
RAB11FIP3-208ENST00000464263 CCR10P46092 362 aa14.57□□□□□ -0.08
RAB11FIP3-208ENST00000464263 CCNG1P51959 295 aa14.57□□□□□ -0.08
RAB11FIP3-208ENST00000464263 BTN3A2P78410 334 aa14.57□□□□□ -0.08
RAB11FIP3-208ENST00000464263 CLCQ05315 142 aa14.57□□□□□ -0.08
RAB11FIP3-208ENST00000464263 CPSF6Q16630 551 aaKnown RBP eCLIP14.57□□□□□ -0.08
RAB11FIP3-208ENST00000464263 KRT71Q3SY84 523 aa14.57□□□□□ -0.08
RAB11FIP3-208ENST00000464263 RAB43Q86YS6 212 aa14.57□□□□□ -0.08
RAB11FIP3-208ENST00000464263 APLFQ8IW19 511 aaPredicted RBP14.57□□□□□ -0.08
RAB11FIP3-208ENST00000464263 ZC3H7AQ8IWR0 971 aaKnown RBP14.57□□□□□ -0.08
RAB11FIP3-208ENST00000464263 SRRM1Q8IYB3 904 aaKnown RBP14.57□□□□□ -0.08
RAB11FIP3-208ENST00000464263 PRSS58Q8IYP2 241 aa14.57□□□□□ -0.08
RAB11FIP3-208ENST00000464263 EXD3Q8N9H8 876 aa14.57□□□□□ -0.08
RAB11FIP3-208ENST00000464263 OR2L5Q8NG80 312 aa14.57□□□□□ -0.08
RAB11FIP3-208ENST00000464263 OR5T3Q8NGG3 340 aa14.57□□□□□ -0.08
RAB11FIP3-208ENST00000464263 HUS1BQ8NHY5 278 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms