RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 ANAPC5Q9UJX4 755 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 UTP11Q9Y3A2 253 aaKnown RBP3.52□□□□□ -1.85
SCFD1-204ENST00000463622 PCYT1BQ9Y5K3 369 aaPredicted RBP3.52□□□□□ -1.85
SCFD1-204ENST00000463622 TEX264Q9Y6I9 313 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 ANKRD36A6QL64 1941 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 A0A0J9YYE9 177 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 ZCWPW2A0A1B0GU75 182 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 A0A1W2PQM1 296 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 POM121BA6NF01 834 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 TMEM233B4DJY2 109 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 LMO7DNF2Z398 122 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 KPNA3O00505 521 aaPredicted RBP3.52□□□□□ -1.85
SCFD1-204ENST00000463622 AREL1O15033 823 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 ALOX15BO15296 676 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 RAD51BO15315 384 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 AQP9O43315 295 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 FAM155BO75949 473 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 CLDN7O95471 211 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 NDST3O95803 873 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 TRBC1P01850 177 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 HNRNPA2B1P22626 353 aaKnown RBP3.52□□□□□ -1.85
SCFD1-204ENST00000463622 CD82P27701 267 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 HTR1BP28222 390 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 GCAP28676 217 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 AKT2P31751 481 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 ZNF140P52738 457 aaPredicted RBP3.52□□□□□ -1.85
SCFD1-204ENST00000463622 DRG2P55039 364 aaKnown RBP3.52□□□□□ -1.85
SCFD1-204ENST00000463622 CLDN2P57739 230 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 SNRPD1P62314 119 aaKnown RBP3.52□□□□□ -1.85
SCFD1-204ENST00000463622 SSBP2P81877 361 aaPredicted RBP3.52□□□□□ -1.85
SCFD1-204ENST00000463622 BCL2L1Q07817 233 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 SLC20A2Q08357 652 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 NSUN2Q08J23 767 aaKnown RBP eCLIP3.52□□□□□ -1.85
SCFD1-204ENST00000463622 MORF4L2Q15014 288 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 CNGA3Q16281 694 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 KYNUQ16719 465 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 GLE1Q53GS7 698 aaKnown RBP3.52□□□□□ -1.85
SCFD1-204ENST00000463622 ZNF789Q5FWF6 425 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 BEND6Q5SZJ8 279 aaPredicted RBP3.52□□□□□ -1.85
SCFD1-204ENST00000463622 TPRG1LQ5T0D9 272 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 SEL1L3Q68CR1 1132 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 ITPRIPL1Q6GPH6 555 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 SLC18B1Q6NT16 456 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 LRRC8BQ6P9F7 803 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 CRTC1Q6UUV9 634 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 HSD11B1LQ7Z5J1 315 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 VASH2Q86V25 355 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 ZFAND4Q86XD8 727 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 CCDC117Q8IWD4 279 aaPredicted RBP3.52□□□□□ -1.85
SCFD1-204ENST00000463622 ZBED8Q8IZ13 594 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 FBXO36Q8NEA4 188 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 OR13J1Q8NGT2 312 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 BLOC1S5Q8TDH9 187 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 NSMCE1Q8WV22 266 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 TMEM171Q8WVE6 324 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 JPH3Q8WXH2 748 aaPredicted RBP3.52□□□□□ -1.85
SCFD1-204ENST00000463622 ANKRD7Q92527 254 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 KLK6Q92876 244 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 LRRC45Q96CN5 670 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 MTFMTQ96DP5 389 aaKnown RBP3.52□□□□□ -1.85
SCFD1-204ENST00000463622 CFAP36Q96G28 342 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 RUNDC3BQ96NL0 473 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 LENG8Q96PV6 779 aaPredicted RBP3.52□□□□□ -1.85
SCFD1-204ENST00000463622 MCCC1Q96RQ3 725 aaPredicted RBP3.52□□□□□ -1.85
SCFD1-204ENST00000463622 KLF6Q99612 283 aaPredicted RBP3.52□□□□□ -1.85
SCFD1-204ENST00000463622 CCDC3Q9BQI4 270 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 RAB17Q9H0T7 212 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 ABCG8Q9H221 673 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 LRRC40Q9H9A6 602 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 ARNT2Q9HBZ2 717 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 FAM114A2Q9NRY5 505 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 TREX1Q9NSU2 369 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 MARCH4Q9P2E8 410 aaPredicted RBP3.52□□□□□ -1.85
SCFD1-204ENST00000463622 CTNNAL1Q9UBT7 734 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 CD84Q9UIB8 345 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 ZNF180Q9UJW8 692 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 ZNF711Q9Y462 761 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 PSAT1Q9Y617 370 aa3.52□□□□□ -1.85
SCFD1-204ENST00000463622 SCN8AQ9UQD0 1980 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 CENPEQ02224 2701 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 OTOGQ6ZRI0 2925 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 A6NNZ2 444 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 ANKRD66B4E2M5 251 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 E7EVH7 732 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 MYO1CO00159 1063 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 AP4M1O00189 453 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 PPP6CO00743 305 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 ANXA9O76027 345 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 UBXN7O94888 489 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 ACSL3O95573 720 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 POP4O95707 220 aaKnown RBP3.51□□□□□ -1.85
SCFD1-204ENST00000463622 SOD1P00441 154 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 RNF224P0DH78 156 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 ADRB3P13945 408 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 HGFP14210 728 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 FPR3P25089 353 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 GABRB3P28472 473 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 SERPINA4P29622 427 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 PPIFP30405 207 aaKnown RBP3.51□□□□□ -1.85
SCFD1-204ENST00000463622 HSD17B3P37058 310 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms