RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 JAK1P23458 1154 aa19.43■□□□□ 0.7
CPSF7-209ENST00000463244 SLC1A2P43004 574 aa19.43■□□□□ 0.7
CPSF7-209ENST00000463244 MLF1P58340 268 aa19.43■□□□□ 0.7
CPSF7-209ENST00000463244 LCTLQ6UWM7 567 aa19.43■□□□□ 0.7
CPSF7-209ENST00000463244 FAM57AQ8TBR7 257 aa19.43■□□□□ 0.7
CPSF7-209ENST00000463244 TMEM125Q96AQ2 219 aa19.43■□□□□ 0.7
CPSF7-209ENST00000463244 SARGQ9BW04 601 aa19.43■□□□□ 0.7
CPSF7-209ENST00000463244 SGPP1Q9BX95 441 aa19.43■□□□□ 0.7
CPSF7-209ENST00000463244 ATG10Q9H0Y0 220 aa19.43■□□□□ 0.7
CPSF7-209ENST00000463244 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.42■□□□□ 0.7
CPSF7-209ENST00000463244 MAGEB16A2A368 324 aa19.42■□□□□ 0.7
CPSF7-209ENST00000463244 NDUFS4O43181 175 aa19.42■□□□□ 0.7
CPSF7-209ENST00000463244 DNAJB6O75190 326 aa19.42■□□□□ 0.7
CPSF7-209ENST00000463244 FGGP02679 453 aa19.42■□□□□ 0.7
CPSF7-209ENST00000463244 CCND1P24385 295 aa19.42■□□□□ 0.7
CPSF7-209ENST00000463244 PTGS2P35354 604 aa19.42■□□□□ 0.7
CPSF7-209ENST00000463244 HLCSP50747 726 aa19.42■□□□□ 0.7
CPSF7-209ENST00000463244 ITGA8P53708 1063 aa19.42■□□□□ 0.7
CPSF7-209ENST00000463244 NAE1Q13564 534 aa19.42■□□□□ 0.7
CPSF7-209ENST00000463244 TRIP13Q15645 432 aaPredicted RBP19.42■□□□□ 0.7
CPSF7-209ENST00000463244 ANKRD22Q5VYY1 191 aa19.42■□□□□ 0.7
CPSF7-209ENST00000463244 LRRC8EQ6NSJ5 796 aa19.42■□□□□ 0.7
CPSF7-209ENST00000463244 CD163Q86VB7 1156 aa19.42■□□□□ 0.7
CPSF7-209ENST00000463244 ARMC10Q8N2F6 343 aa19.42■□□□□ 0.7
CPSF7-209ENST00000463244 MARVELD2Q8N4S9 558 aa19.42■□□□□ 0.7
CPSF7-209ENST00000463244 MAIP1Q8WWC4 291 aa19.42■□□□□ 0.7
CPSF7-209ENST00000463244 PHF3Q92576 2039 aaKnown RBP19.42■□□□□ 0.7
CPSF7-209ENST00000463244 ACANP16112 2415 aa19.41■□□□□ 0.7
CPSF7-209ENST00000463244 ANKHD1Q8IWZ3 2542 aaKnown RBP19.41■□□□□ 0.7
CPSF7-209ENST00000463244 A0A1B0GTH9 108 aa19.41■□□□□ 0.7
CPSF7-209ENST00000463244 SAGE2PA6NJ88 616 aa19.41■□□□□ 0.7
CPSF7-209ENST00000463244 TFECO14948 347 aaPredicted RBP19.41■□□□□ 0.7
CPSF7-209ENST00000463244 CHST10O43529 356 aa19.41■□□□□ 0.7
CPSF7-209ENST00000463244 B4GALT2O60909 372 aa19.41■□□□□ 0.7
CPSF7-209ENST00000463244 TPOP07202 933 aa19.41■□□□□ 0.7
CPSF7-209ENST00000463244 C8GP07360 202 aa19.41■□□□□ 0.7
CPSF7-209ENST00000463244 NPPBP16860 134 aa19.41■□□□□ 0.7
CPSF7-209ENST00000463244 ALOX12P18054 663 aa19.41■□□□□ 0.7
CPSF7-209ENST00000463244 MEOX1P50221 254 aa19.41■□□□□ 0.7
CPSF7-209ENST00000463244 SKP1P63208 163 aa19.41■□□□□ 0.7
CPSF7-209ENST00000463244 OLR1P78380 273 aa19.41■□□□□ 0.7
CPSF7-209ENST00000463244 PWP1Q13610 501 aa19.41■□□□□ 0.7
CPSF7-209ENST00000463244 DEFB134Q4QY38 66 aa19.41■□□□□ 0.7
CPSF7-209ENST00000463244 QSOX2Q6ZRP7 698 aa19.41■□□□□ 0.7
CPSF7-209ENST00000463244 ABHD11Q8NFV4 315 aa19.41■□□□□ 0.7
CPSF7-209ENST00000463244 ALKBH8Q96BT7 664 aaKnown RBP19.41■□□□□ 0.7
CPSF7-209ENST00000463244 PTCHD1Q96NR3 888 aa19.41■□□□□ 0.7
CPSF7-209ENST00000463244 AARSD1Q9BTE6 412 aaKnown RBP19.41■□□□□ 0.7
CPSF7-209ENST00000463244 PARVBQ9HBI1 364 aa19.41■□□□□ 0.7
CPSF7-209ENST00000463244 KLF13Q9Y2Y9 288 aaPredicted RBP19.41■□□□□ 0.7
CPSF7-209ENST00000463244 HRH3Q9Y5N1 445 aa19.41■□□□□ 0.7
CPSF7-209ENST00000463244 SDR42E2A6NKP2 422 aa19.4■□□□□ 0.7
CPSF7-209ENST00000463244 PRMT3O60678 531 aa19.4■□□□□ 0.7
CPSF7-209ENST00000463244 HAUS5O94927 633 aa19.4■□□□□ 0.7
CPSF7-209ENST00000463244 B3GALT4O96024 378 aa19.4■□□□□ 0.7
CPSF7-209ENST00000463244 MLNP12872 115 aa19.4■□□□□ 0.7
CPSF7-209ENST00000463244 CD1EP15812 388 aa19.4■□□□□ 0.7
CPSF7-209ENST00000463244 VPS41P49754 854 aa19.4■□□□□ 0.7
CPSF7-209ENST00000463244 CCR8P51685 355 aa19.4■□□□□ 0.7
CPSF7-209ENST00000463244 TIAL1Q01085 375 aaKnown RBP eCLIP19.4■□□□□ 0.75e-6■■■■□ 21
CPSF7-209ENST00000463244 MEF2AQ02078 507 aaPredicted RBP19.4■□□□□ 0.7
CPSF7-209ENST00000463244 TFF3Q07654 80 aa19.4■□□□□ 0.7
CPSF7-209ENST00000463244 GPS1Q13098 491 aa19.4■□□□□ 0.7
CPSF7-209ENST00000463244 SP140Q13342 867 aa19.4■□□□□ 0.7
CPSF7-209ENST00000463244 NIPAL1Q6NVV3 410 aa19.4■□□□□ 0.7
CPSF7-209ENST00000463244 SULF2Q8IWU5 870 aa19.4■□□□□ 0.7
CPSF7-209ENST00000463244 LMNTD2Q8IXW0 634 aa19.4■□□□□ 0.7
CPSF7-209ENST00000463244 CYP4X1Q8N118 509 aa19.4■□□□□ 0.7
CPSF7-209ENST00000463244 NFAM1Q8NET5 270 aaPredicted RBP19.4■□□□□ 0.7
CPSF7-209ENST00000463244 OR4K1Q8NGD4 311 aa19.4■□□□□ 0.7
CPSF7-209ENST00000463244 EEF1AKMT1Q8WVE0 214 aa19.4■□□□□ 0.7
CPSF7-209ENST00000463244 ASB5Q8WWX0 329 aa19.4■□□□□ 0.7
CPSF7-209ENST00000463244 NPDC1Q9NQX5 325 aaPredicted RBP19.4■□□□□ 0.7
CPSF7-209ENST00000463244 TRMT6Q9UJA5 497 aaKnown RBP19.4■□□□□ 0.7
CPSF7-209ENST00000463244 FBXO5Q9UKT4 447 aa19.4■□□□□ 0.7
CPSF7-209ENST00000463244 VPS13CQ709C8 3753 aa19.39■□□□□ 0.7
CPSF7-209ENST00000463244 KLRC4-KLRK1H3BQV0 150 aa19.39■□□□□ 0.69
CPSF7-209ENST00000463244 FCHO1O14526 889 aa19.39■□□□□ 0.69
CPSF7-209ENST00000463244 OR1F1O43749 312 aa19.39■□□□□ 0.69
CPSF7-209ENST00000463244 HS6ST1O60243 411 aa19.39■□□□□ 0.69
CPSF7-209ENST00000463244 CEP104O60308 925 aa19.39■□□□□ 0.69
CPSF7-209ENST00000463244 TFEBP19484 476 aa19.39■□□□□ 0.69
CPSF7-209ENST00000463244 RFC3P40938 356 aa19.39■□□□□ 0.69
CPSF7-209ENST00000463244 BTG2P78543 158 aa19.39■□□□□ 0.69
CPSF7-209ENST00000463244 CMPK2Q5EBM0 449 aa19.39■□□□□ 0.69
CPSF7-209ENST00000463244 TMEM211Q6ICI0 200 aa19.39■□□□□ 0.69
CPSF7-209ENST00000463244 CEP128Q6ZU80 1094 aa19.39■□□□□ 0.69
CPSF7-209ENST00000463244 STRA8Q7Z7C7 330 aa19.39■□□□□ 0.69
CPSF7-209ENST00000463244 PALM2Q8IXS6 379 aa19.39■□□□□ 0.69
CPSF7-209ENST00000463244 LILRB4Q8NHJ6 448 aa19.39■□□□□ 0.69
CPSF7-209ENST00000463244 C16orf52Q8NHV5 167 aa19.39■□□□□ 0.69
CPSF7-209ENST00000463244 CALML6Q8TD86 181 aa19.39■□□□□ 0.69
CPSF7-209ENST00000463244 HAUS8Q9BT25 410 aa19.39■□□□□ 0.69
CPSF7-209ENST00000463244 DEFB126Q9BYW3 111 aa19.39■□□□□ 0.69
CPSF7-209ENST00000463244 XAB2Q9HCS7 855 aaKnown RBP19.39■□□□□ 0.69
CPSF7-209ENST00000463244 HOMER3Q9NSC5 361 aa19.39■□□□□ 0.69
CPSF7-209ENST00000463244 C20orf96Q9NUD7 363 aaPredicted RBP19.39■□□□□ 0.69
CPSF7-209ENST00000463244 TNFRSF10DQ9UBN6 386 aa19.39■□□□□ 0.69
CPSF7-209ENST00000463244 IGKV3D-11A0A0A0MRZ8 115 aa19.38■□□□□ 0.69
CPSF7-209ENST00000463244 TCRBV16S1A1N1A0A5B0 115 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms