RNA–Protein interactions for RNA: ENST00000463013.1

KDM3A-208, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-208ENST00000463013 FAM86B1E9PN63 330 aa3□□□□□ -1.93
KDM3A-208ENST00000463013 NPIPA3F8WFD2 350 aa3□□□□□ -1.93
KDM3A-208ENST00000463013 H7C0S8 307 aa3□□□□□ -1.93
KDM3A-208ENST00000463013 FLRT2O43155 660 aa3□□□□□ -1.93
KDM3A-208ENST00000463013 PPIP5K2O43314 1243 aa3□□□□□ -1.93
KDM3A-208ENST00000463013 KIF5CO60282 957 aa3□□□□□ -1.93
KDM3A-208ENST00000463013 MTRF1O75570 445 aaKnown RBP3□□□□□ -1.93
KDM3A-208ENST00000463013 RPLP0P05388 317 aaKnown RBP3□□□□□ -1.93
KDM3A-208ENST00000463013 APOA4P06727 396 aa3□□□□□ -1.93
KDM3A-208ENST00000463013 FAM86B2P0C5J1 330 aa3□□□□□ -1.93
KDM3A-208ENST00000463013 SELEP16581 610 aa3□□□□□ -1.93
KDM3A-208ENST00000463013 IL4RP24394 825 aa3□□□□□ -1.93
KDM3A-208ENST00000463013 SSTR1P30872 391 aa3□□□□□ -1.93
KDM3A-208ENST00000463013 CSRP3P50461 194 aa3□□□□□ -1.93
KDM3A-208ENST00000463013 CLCN4P51793 760 aa3□□□□□ -1.93
KDM3A-208ENST00000463013 FKBP3Q00688 224 aaKnown RBP3□□□□□ -1.93
KDM3A-208ENST00000463013 FCHO2Q0JRZ9 810 aa3□□□□□ -1.93
KDM3A-208ENST00000463013 KIAA0141Q14154 515 aaPredicted RBP3□□□□□ -1.93
KDM3A-208ENST00000463013 ZNF146Q15072 292 aa3□□□□□ -1.93
KDM3A-208ENST00000463013 FAM182AQ5T1J6 154 aa3□□□□□ -1.93
KDM3A-208ENST00000463013 SPOUT1Q5T280 376 aaKnown RBP3□□□□□ -1.93
KDM3A-208ENST00000463013 SHEQ5VZ18 495 aa3□□□□□ -1.93
KDM3A-208ENST00000463013 TXNRD3NBQ6F5E7 133 aa3□□□□□ -1.93
KDM3A-208ENST00000463013 MACC1Q6ZN28 852 aa3□□□□□ -1.93
KDM3A-208ENST00000463013 COX8CQ7Z4L0 72 aa3□□□□□ -1.93
KDM3A-208ENST00000463013 C5orf24Q7Z6I8 188 aa3□□□□□ -1.93
KDM3A-208ENST00000463013 CCDC185Q8N715 623 aa3□□□□□ -1.93
KDM3A-208ENST00000463013 OR9Q2Q8NGE9 314 aa3□□□□□ -1.93
KDM3A-208ENST00000463013 NCOA7Q8NI08 942 aa3□□□□□ -1.93
KDM3A-208ENST00000463013 ZDHHC19Q8WVZ1 309 aaPredicted RBP3□□□□□ -1.93
KDM3A-208ENST00000463013 ZNF597Q96LX8 424 aa3□□□□□ -1.93
KDM3A-208ENST00000463013 ATF6BQ99941 703 aa3□□□□□ -1.93
KDM3A-208ENST00000463013 FERMT1Q9BQL6 677 aa3□□□□□ -1.93
KDM3A-208ENST00000463013 CHCHD5Q9BSY4 110 aa3□□□□□ -1.93
KDM3A-208ENST00000463013 ALKBH7Q9BT30 221 aaPredicted RBP3□□□□□ -1.93
KDM3A-208ENST00000463013 INPP5KQ9BT40 448 aa3□□□□□ -1.93
KDM3A-208ENST00000463013 AP1M1Q9BXS5 423 aa3□□□□□ -1.93
KDM3A-208ENST00000463013 C10orf88Q9H8K7 445 aa3□□□□□ -1.93
KDM3A-208ENST00000463013 LMAN1LQ9HAT1 526 aa3□□□□□ -1.93
KDM3A-208ENST00000463013 GTSE1Q9NYZ3 720 aa3□□□□□ -1.93
KDM3A-208ENST00000463013 HTR3EA5X5Y0 456 aa2.99□□□□□ -1.93
KDM3A-208ENST00000463013 SRRM5B3KS81 715 aa2.99□□□□□ -1.93
KDM3A-208ENST00000463013 E5RGE8 158 aa2.99□□□□□ -1.93
KDM3A-208ENST00000463013 MOCS2O96007 188 aaPredicted RBP2.99□□□□□ -1.93
KDM3A-208ENST00000463013 GBAP04062 536 aa2.99□□□□□ -1.93
KDM3A-208ENST00000463013 HOXD4P09016 255 aaPredicted RBP2.99□□□□□ -1.93
KDM3A-208ENST00000463013 QDPRP09417 244 aa2.99□□□□□ -1.93
KDM3A-208ENST00000463013 FAM58BPP0C7Q3 252 aa2.99□□□□□ -1.93
KDM3A-208ENST00000463013 PCP11498 1178 aaKnown RBP2.99□□□□□ -1.93
KDM3A-208ENST00000463013 GIFP27352 417 aa2.99□□□□□ -1.93
KDM3A-208ENST00000463013 PSMB4P28070 264 aa2.99□□□□□ -1.93
KDM3A-208ENST00000463013 PKLRP30613 574 aa2.99□□□□□ -1.93
KDM3A-208ENST00000463013 OR3A3P47888 321 aa2.99□□□□□ -1.93
KDM3A-208ENST00000463013 CAPZA1P52907 286 aa2.99□□□□□ -1.93
KDM3A-208ENST00000463013 PTENP60484 403 aa2.99□□□□□ -1.93
KDM3A-208ENST00000463013 GRB14Q14449 540 aa2.99□□□□□ -1.93
KDM3A-208ENST00000463013 UPP1Q16831 310 aa2.99□□□□□ -1.93
KDM3A-208ENST00000463013 CDO1Q16878 200 aa2.99□□□□□ -1.93
KDM3A-208ENST00000463013 ZNF542PQ5EBM4 170 aa2.99□□□□□ -1.93
KDM3A-208ENST00000463013 SPANXN4Q5MJ08 99 aa2.99□□□□□ -1.93
KDM3A-208ENST00000463013 ZNF841Q6ZN19 808 aa2.99□□□□□ -1.93
KDM3A-208ENST00000463013 TMEM182Q6ZP80 229 aaPredicted RBP2.99□□□□□ -1.93
KDM3A-208ENST00000463013 SPATA21Q7Z572 469 aa2.99□□□□□ -1.93
KDM3A-208ENST00000463013 PHLDB2Q86SQ0 1253 aa2.99□□□□□ -1.93
KDM3A-208ENST00000463013 RNF130Q86XS8 419 aa2.99□□□□□ -1.93
KDM3A-208ENST00000463013 CROCCP3Q8IVE0 287 aa2.99□□□□□ -1.93
KDM3A-208ENST00000463013 TEX26Q8N6G2 289 aa2.99□□□□□ -1.93
KDM3A-208ENST00000463013 OR5M9Q8NGP3 310 aa2.99□□□□□ -1.93
KDM3A-208ENST00000463013 ST6GALNAC6Q969X2 333 aa2.99□□□□□ -1.93
KDM3A-208ENST00000463013 ZNF577Q9BSK1 485 aa2.99□□□□□ -1.93
KDM3A-208ENST00000463013 RPP25Q9BUL9 199 aaKnown RBP2.99□□□□□ -1.93
KDM3A-208ENST00000463013 PAPOLGQ9BWT3 736 aaKnown RBP2.99□□□□□ -1.93
KDM3A-208ENST00000463013 PUS3Q9BZE2 481 aaKnown RBP2.99□□□□□ -1.93
KDM3A-208ENST00000463013 RPF1Q9H9Y2 349 aaKnown RBP2.99□□□□□ -1.93
KDM3A-208ENST00000463013 KLK11Q9UBX7 282 aa2.99□□□□□ -1.93
KDM3A-208ENST00000463013 PLCL2Q9UPR0 1127 aa2.99□□□□□ -1.93
KDM3A-208ENST00000463013 NSG2Q9Y328 171 aa2.99□□□□□ -1.93
KDM3A-208ENST00000463013 MRPS18CQ9Y3D5 142 aaKnown RBP2.99□□□□□ -1.93
KDM3A-208ENST00000463013 IGKV6D-41A0A0C4DH26 115 aa2.98□□□□□ -1.93
KDM3A-208ENST00000463013 PGRMC2O15173 223 aa2.98□□□□□ -1.93
KDM3A-208ENST00000463013 TIMM44O43615 452 aa2.98□□□□□ -1.93
KDM3A-208ENST00000463013 EIF5BO60841 1220 aaKnown RBP2.98□□□□□ -1.93
KDM3A-208ENST00000463013 LRCH4O75427 683 aa2.98□□□□□ -1.93
KDM3A-208ENST00000463013 MT-ND2P03891 347 aa2.98□□□□□ -1.93
KDM3A-208ENST00000463013 VIMP08670 466 aaKnown RBP2.98□□□□□ -1.93
KDM3A-208ENST00000463013 LBPP18428 481 aa2.98□□□□□ -1.93
KDM3A-208ENST00000463013 ITIH1P19827 911 aa2.98□□□□□ -1.93
KDM3A-208ENST00000463013 PIK3R1P27986 724 aa2.98□□□□□ -1.93
KDM3A-208ENST00000463013 TIA1P31483 386 aaKnown RBP eCLIP2.98□□□□□ -1.93
KDM3A-208ENST00000463013 LIMK2P53671 638 aa2.98□□□□□ -1.93
KDM3A-208ENST00000463013 HIGD2BQ4VC39 106 aa2.98□□□□□ -1.93
KDM3A-208ENST00000463013 FAM46CQ5VWP2 391 aa2.98□□□□□ -1.93
KDM3A-208ENST00000463013 TRAT1Q6PIZ9 186 aa2.98□□□□□ -1.93
KDM3A-208ENST00000463013 TRMT11Q7Z4G4 463 aaKnown RBP2.98□□□□□ -1.93
KDM3A-208ENST00000463013 SLC25A42Q86VD7 318 aa2.98□□□□□ -1.93
KDM3A-208ENST00000463013 DND1Q8IYX4 353 aaKnown RBP2.98□□□□□ -1.93
KDM3A-208ENST00000463013 SLC39A11Q8N1S5 342 aa2.98□□□□□ -1.93
KDM3A-208ENST00000463013 SETD6Q8TBK2 473 aa2.98□□□□□ -1.93
KDM3A-208ENST00000463013 SPPL2AQ8TCT8 520 aa2.98□□□□□ -1.93
KDM3A-208ENST00000463013 TOMM40LQ969M1 308 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms